RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 GIPRP48546 466 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 BNIP3Q12983 259 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 FZD5Q13467 585 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 MLECQ14165 292 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 ARSHQ5FYA8 562 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 C9orf131Q5VYM1 1079 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 GK5Q6ZS86 529 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 C19orf47Q8N9M1 422 aaKnown RBP5.06□□□□□ -1.6
CDKL5-208ENST00000624953 XAGE3Q8WTP9 111 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 SEC16BQ96JE7 1060 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 SLC9A7Q96T83 725 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 KIF2CQ99661 725 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 ACBD3Q9H3P7 528 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 LMCD1Q9NZU5 365 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 ADAMTS6Q9UKP5 1117 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 NEURL4Q96JN8 1562 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 ABCC1P33527 1531 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 AGLP35573 1532 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 PLCH2O75038 1416 aa5.06□□□□□ -1.6
CDKL5-208ENST00000624953 SHOXO15266 292 aa5.05□□□□□ -1.6
CDKL5-208ENST00000624953 ESR1P03372 595 aa5.05□□□□□ -1.6
CDKL5-208ENST00000624953 CYP7A1P22680 504 aa5.05□□□□□ -1.6
CDKL5-208ENST00000624953 POLR2BP30876 1174 aaKnown RBP5.05□□□□□ -1.6
CDKL5-208ENST00000624953 AOC3Q16853 763 aa5.05□□□□□ -1.6
CDKL5-208ENST00000624953 NBPF12Q5TAG4 269 aaPredicted RBP5.05□□□□□ -1.6
CDKL5-208ENST00000624953 LSRQ86X29 649 aaPredicted RBP5.05□□□□□ -1.6
CDKL5-208ENST00000624953 AGBL5Q8NDL9 886 aa5.05□□□□□ -1.6
CDKL5-208ENST00000624953 SHDQ96IW2 340 aa5.05□□□□□ -1.6
CDKL5-208ENST00000624953 HSPA12BQ96MM6 686 aa5.05□□□□□ -1.6
CDKL5-208ENST00000624953 TM9SF2Q99805 663 aa5.05□□□□□ -1.6
CDKL5-208ENST00000624953 MBNL3Q9NUK0 354 aaKnown RBP5.05□□□□□ -1.6
CDKL5-208ENST00000624953 KLHL3Q9UH77 587 aa5.05□□□□□ -1.6
CDKL5-208ENST00000624953 SETD1AO15047 1707 aaKnown RBP5.05□□□□□ -1.6
CDKL5-208ENST00000624953 ADGBQ8N7X0 1667 aa5.05□□□□□ -1.6
CDKL5-208ENST00000624953 PLXNC1O60486 1568 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 CEP170BQ9Y4F5 1589 aaPredicted RBP5.04□□□□□ -1.6
CDKL5-208ENST00000624953 GNAT3A8MTJ3 354 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 LRRN2O75325 713 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 ITIH2P19823 946 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 CD96P40200 585 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 TMEM192Q8IY95 271 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 SLC43A3Q8NBI5 491 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 ASB11Q8WXH4 323 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 GMLQ99445 158 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.04□□□□□ -1.6
CDKL5-208ENST00000624953 C19orf73Q9NVV2 129 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 PRR13Q9NZ81 148 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 TPX2Q9ULW0 747 aaKnown RBP5.04□□□□□ -1.6
CDKL5-208ENST00000624953 PPT2Q9UMR5 302 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 ZNF518AQ6AHZ1 1483 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 DNMT1P26358 1616 aaKnown RBP5.04□□□□□ -1.6
CDKL5-208ENST00000624953 SAMD9LQ8IVG5 1584 aa5.04□□□□□ -1.6
CDKL5-208ENST00000624953 INO80Q9ULG1 1556 aaPredicted RBP5.04□□□□□ -1.6
CDKL5-208ENST00000624953 TCOF1Q13428 1488 aaKnown RBP5.03□□□□□ -1.6
CDKL5-208ENST00000624953 FGRP09769 529 aa5.03□□□□□ -1.6
CDKL5-208ENST00000624953 ATF4P18848 351 aaPredicted RBP5.03□□□□□ -1.6
CDKL5-208ENST00000624953 TNNI2P48788 182 aa5.03□□□□□ -1.6
CDKL5-208ENST00000624953 NBPF9Q3BBW0 867 aa5.03□□□□□ -1.6
CDKL5-208ENST00000624953 SLC23A3Q6PIS1 610 aa5.03□□□□□ -1.6
CDKL5-208ENST00000624953 TMPRSS7Q7RTY8 843 aa5.03□□□□□ -1.6
CDKL5-208ENST00000624953 FLCNQ8NFG4 579 aa5.03□□□□□ -1.6
CDKL5-208ENST00000624953 HDAC8Q9BY41 377 aa5.03□□□□□ -1.6
CDKL5-208ENST00000624953 SP110Q9HB58 689 aa5.03□□□□□ -1.6
CDKL5-208ENST00000624953 ATP13A1Q9HD20 1204 aa5.03□□□□□ -1.6
CDKL5-208ENST00000624953 CFAP65Q6ZU64 1925 aaKnown RBP5.03□□□□□ -1.6
CDKL5-208ENST00000624953 ARID1BQ8NFD5 2236 aaPredicted RBP5.03□□□□□ -1.6
CDKL5-208ENST00000624953 ZC3H13Q5T200 1668 aaKnown RBP5.02□□□□□ -1.61
CDKL5-208ENST00000624953 ZNF335Q9H4Z2 1342 aaPredicted RBP5.02□□□□□ -1.61
CDKL5-208ENST00000624953 MLH3Q9UHC1 1453 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 SHISA3A0PJX4 238 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 RAG1P15918 1043 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 CASP7P55210 303 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 ZYXQ15942 572 aaKnown RBP5.02□□□□□ -1.61
CDKL5-208ENST00000624953 ANKRD39Q53RE8 183 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 ANGEL2Q5VTE6 544 aaKnown RBP5.02□□□□□ -1.61
CDKL5-208ENST00000624953 TSPYL5Q86VY4 417 aaPredicted RBP5.02□□□□□ -1.61
CDKL5-208ENST00000624953 PPFIBP1Q86W92 1011 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 FLAD1Q8NFF5 587 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 OR6P1Q8NGX9 317 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 ENOX1Q8TC92 643 aaKnown RBP5.02□□□□□ -1.61
CDKL5-208ENST00000624953 SUCOQ9UBS9 1254 aaKnown RBP5.02□□□□□ -1.61
CDKL5-208ENST00000624953 STRIP2Q9ULQ0 834 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 ANGEL1Q9UNK9 670 aaKnown RBP5.02□□□□□ -1.61
CDKL5-208ENST00000624953 EFR3BQ9Y2G0 817 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 TRAPPC8Q9Y2L5 1435 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 VWDEQ8N2E2 1590 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 ARHGAP5Q13017 1502 aa5.02□□□□□ -1.61
CDKL5-208ENST00000624953 LTBP3Q9NS15 1303 aa5.01□□□□□ -1.61
CDKL5-208ENST00000624953 RNASE1P07998 156 aaKnown RBP5.01□□□□□ -1.61
CDKL5-208ENST00000624953 GUCY2CP25092 1073 aa5.01□□□□□ -1.61
CDKL5-208ENST00000624953 ERCC5P28715 1186 aaPredicted RBP5.01□□□□□ -1.61
CDKL5-208ENST00000624953 RBM25P49756 843 aaKnown RBP5.01□□□□□ -1.61
CDKL5-208ENST00000624953 PMS1P54277 932 aaKnown RBP5.01□□□□□ -1.61
CDKL5-208ENST00000624953 RNF4P78317 190 aa5.01□□□□□ -1.61
CDKL5-208ENST00000624953 ZNF792Q3KQV3 632 aa5.01□□□□□ -1.61
CDKL5-208ENST00000624953 OGFOD2Q6N063 350 aa5.01□□□□□ -1.61
CDKL5-208ENST00000624953 PHACTR4Q8IZ21 702 aa5.01□□□□□ -1.61
CDKL5-208ENST00000624953 SYTL5Q8TDW5 730 aaPredicted RBP5.01□□□□□ -1.61
CDKL5-208ENST00000624953 CCSER2Q9H7U1 834 aa5.01□□□□□ -1.61
CDKL5-208ENST00000624953 PLA2R1Q13018 1463 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms