RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 TRIM43BA6NCK2 446 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 ERC2O15083 957 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 ZNF865P0CJ78 1059 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-227ENST00000622057 TLE2Q04725 743 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 SNX17Q15036 470 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 PPP4R3CPQ6ZMV5 832 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 LRRC47Q8N1G4 583 aaKnown RBP11.11□□□□□ -0.63
TARDBP-227ENST00000622057 MKL1Q969V6 931 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 TRIM43Q96BQ3 446 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-227ENST00000622057 LENG1Q96BZ8 264 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-227ENST00000622057 CEP95Q96GE4 821 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 NACAP1Q9BZK3 213 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 MTMR4Q9NYA4 1195 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 FEM1BQ9UK73 627 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 ZHX1Q9UKY1 873 aaPredicted RBP11.11□□□□□ -0.63
TARDBP-227ENST00000622057 FAM184BQ9ULE4 1060 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 PHF24Q9UPV7 400 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 RLFQ13129 1914 aa11.11□□□□□ -0.63
TARDBP-227ENST00000622057 SNAI1O95863 264 aaPredicted RBP11.1□□□□□ -0.63
TARDBP-227ENST00000622057 TTLL1O95922 423 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 TSPY3P0CV98 308 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 TSPY8P0CW00 308 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 TFAP4Q01664 338 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 PDE4BQ07343 736 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 C9orf50Q5SZB4 431 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 C1orf53Q5VUE5 145 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 SLFN13Q68D06 897 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 ANKRD35Q8N283 1001 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 FSD1Q9BTV5 496 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 NAPBQ9H115 298 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 PDLIM7Q9NR12 457 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 PCDHB15Q9Y5E8 787 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 TACC3Q9Y6A5 838 aa11.1□□□□□ -0.63
TARDBP-227ENST00000622057 TTC41PQ6P2S7 1318 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 A0A1W2PQ45 241 aaPredicted RBP11.09□□□□□ -0.63
TARDBP-227ENST00000622057 A0A1W2PQY0 241 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 TMEM232C9JQI7 657 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 ATP2A1O14983 1001 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 PQBP1O60828 265 aaKnown RBP11.09□□□□□ -0.63
TARDBP-227ENST00000622057 SLC3A2P08195 630 aaKnown RBP11.09□□□□□ -0.63
TARDBP-227ENST00000622057 CLTBP09497 229 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 BMP3P12645 472 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 RAG1P15918 1043 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 ITGB8P26012 769 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 PPARAQ07869 468 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 IKQ13123 557 aaPredicted RBP11.09□□□□□ -0.63
TARDBP-227ENST00000622057 ACVR2BQ13705 512 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 KCNA10Q16322 511 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 ZNF697Q5TEC3 545 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 FAM109BQ6ICB4 259 aaPredicted RBP11.09□□□□□ -0.63
TARDBP-227ENST00000622057 MSL3Q8N5Y2 521 aaKnown RBP11.09□□□□□ -0.63
TARDBP-227ENST00000622057 NEDD1Q8NHV4 660 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 PI4K2BQ8TCG2 481 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 OTUD7AQ8TE49 926 aaPredicted RBP11.09□□□□□ -0.63
TARDBP-227ENST00000622057 VTI1AQ96AJ9 217 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 SLC38A10Q9HBR0 1119 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 STARD7Q9NQZ5 370 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 TMEM39AQ9NV64 488 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
TARDBP-227ENST00000622057 DNAH12Q6ZR08 3092 aa11.09□□□□□ -0.63
TARDBP-227ENST00000622057 ROBO3Q96MS0 1386 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 ZNF236Q9UL36 1845 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 DNAJC25-GNG10A0A024R161 153 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 ADAMTS4O75173 837 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 ACLYP53396 1101 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 IRX5P78411 483 aaPredicted RBP11.08□□□□□ -0.64
TARDBP-227ENST00000622057 MAMDC4Q6UXC1 1216 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 GMCL1P1Q8NEA9 526 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 CHST13Q8NET6 341 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 NUP133Q8WUM0 1156 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 GUCD1Q96NT3 240 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 TSEN34Q9BSV6 310 aaKnown RBP11.08□□□□□ -0.64
TARDBP-227ENST00000622057 INCENPQ9NQS7 918 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 HOMER2Q9NSB8 354 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.08□□□□□ -0.64
TARDBP-227ENST00000622057 FBXO40Q9UH90 709 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 MTMR7Q9Y216 660 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 A0A0G2JMZ2 1700 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 SYNGAP1Q96PV0 1343 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 COL6A3P12111 3177 aa11.08□□□□□ -0.64
TARDBP-227ENST00000622057 MYH8P13535 1937 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 FRMPD3Q5JV73 1810 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 TSPY2A6NKD2 308 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 DUSP11O75319 330 aaKnown RBP11.07□□□□□ -0.64
TARDBP-227ENST00000622057 MCCP23508 829 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 SLC1A4P43007 532 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 STAT2P52630 851 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 OAZ1P54368 228 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 CTDSPL2Q05D32 466 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 ZMYM1Q5SVZ6 1142 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 ANKRD45Q5TZF3 282 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 CCDC129Q6ZRS4 1044 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 KLHDC9Q8NEP7 349 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 CHURC1Q8WUH1 139 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 SEMA6BQ9H3T3 888 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 SPC25Q9HBM1 224 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 STX8Q9UNK0 236 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 SYNRGQ9UMZ2 1314 aa11.07□□□□□ -0.64
TARDBP-227ENST00000622057 MYADML2A6NDP7 307 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms