RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 GCOM1H8Y6P7 765 aaPredicted RBP14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 POLR2MP0CAP2 368 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 SYKP43405 635 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 FAM160B2Q86V87 743 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 USP28Q96RU2 1077 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 SOCS7O14512 581 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 GUCY1A2P33402 732 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 ISM2Q6H9L7 571 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 NBPF3Q9H094 633 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 NUP188Q5SRE5 1749 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 PDHBP11177 359 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 MAP3K11Q16584 847 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 ANKRD13AQ8IZ07 590 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 RPAP3Q9H6T3 665 aaPredicted RBP14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 RAVER2Q9HCJ3 691 aaKnown RBP14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 SBF2Q86WG5 1849 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 A0A1B0GVL5 298 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 BIN1O00499 593 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 IDEP14735 1019 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 OSBPP22059 807 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 HOXA13P31271 388 aaPredicted RBP14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 TROAPQ12815 778 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 UBE2SQ16763 222 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 FKBP1CQ5VVH2 108 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 USP50Q70EL3 339 aaPredicted RBP14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 MRPS27Q92552 414 aaKnown RBP14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 SLF1Q9BQI6 1058 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 IL17RBQ9NRM6 502 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 DACT1Q9NYF0 836 aa14.22□□□□□ -0.13
SCAMP1-207ENST00000621999 B4DLN1 442 aa14.21□□□□□ -0.13
SCAMP1-207ENST00000621999 CHMP2AO43633 222 aa14.21□□□□□ -0.13
SCAMP1-207ENST00000621999 LETM1O95202 739 aaPredicted RBP14.21□□□□□ -0.13
SCAMP1-207ENST00000621999 ZNF543Q08ER8 600 aa14.21□□□□□ -0.13
SCAMP1-207ENST00000621999 ZBTB5O15062 677 aa14.21□□□□□ -0.13
SCAMP1-207ENST00000621999 AFMP43652 599 aa14.21□□□□□ -0.13
SCAMP1-207ENST00000621999 SCYL3Q8IZE3 742 aa14.21□□□□□ -0.13
SCAMP1-207ENST00000621999 KRI1Q8N9T8 703 aaKnown RBP14.21□□□□□ -0.13
SCAMP1-207ENST00000621999 VCPKMTQ9H867 229 aa14.21□□□□□ -0.13
SCAMP1-207ENST00000621999 CCDC192P0DO97 292 aa14.21□□□□□ -0.14
SCAMP1-207ENST00000621999 QRICH1Q2TAL8 776 aa14.21□□□□□ -0.14
SCAMP1-207ENST00000621999 CDAN1Q8IWY9 1227 aa14.21□□□□□ -0.14
SCAMP1-207ENST00000621999 PRPF38AQ8NAV1 312 aaKnown RBP14.21□□□□□ -0.14
SCAMP1-207ENST00000621999 BEGAINQ9BUH8 593 aa14.21□□□□□ -0.14
SCAMP1-207ENST00000621999 DDX39AO00148 427 aaKnown RBP14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 DHX58Q96C10 678 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 FOXP2O15409 715 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 MMP1P03956 469 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 ZNF157P51786 506 aaPredicted RBP14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 TMEM132AQ24JP5 1023 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 RASGRP2Q7LDG7 609 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 LEO1Q8WVC0 666 aaPredicted RBP14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 NAT10Q9H0A0 1025 aaKnown RBP14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 SEC23AQ15436 765 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 FTOQ9C0B1 505 aaKnown RBP eCLIP14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 FBXO28Q9NVF7 368 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 PCDHA4Q9UN74 947 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 HPS5Q9UPZ3 1129 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 ANKRD36CQ5JPF3 1778 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 TESPA1A2RU30 521 aaPredicted RBP14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 HOXC10Q9NYD6 342 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 FEM1BQ9UK73 627 aa14.2□□□□□ -0.14
SCAMP1-207ENST00000621999 C4AP0C0L4 1744 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 KIF23Q02241 960 aaPredicted RBP14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 PFKFB3Q16875 520 aaPredicted RBP14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 ARHGEF16Q5VV41 709 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 KRT79Q5XKE5 535 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 DLK2Q6UY11 383 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 TSPY26PQ9H489 355 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 EP400Q96L91 3159 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 USP17L15C9J2P7 530 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 USP17L13C9JLJ4 530 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 USP17L11C9JVI0 530 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 USP17L18D6R9N7 530 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 USP17L22D6RA61 530 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 USP17L17D6RBQ6 530 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 USP17L19D6RCP7 530 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 USP17L20D6RJB6 530 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 RCAN1P53805 252 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 USP17L24Q0WX57 530 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 PRR16Q569H4 304 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 USP17L6PQ6QN14 398 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 MOB2Q70IA6 237 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 ERMNQ8TAM6 284 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 MCF2L2Q86YR7 1114 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 CDCA5Q96FF9 252 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 LTBP3Q9NS15 1303 aa14.19□□□□□ -0.14
SCAMP1-207ENST00000621999 DEKP35659 375 aaKnown RBP14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 STAT6P42226 847 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 CCDC183Q5T5S1 534 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 ATL3Q6DD88 541 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 KLHL10Q6JEL2 608 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 NEK8Q86SG6 692 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 UBR3Q6ZT12 1888 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 SMC2O95347 1197 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 DDX19AQ9NUU7 478 aaKnown RBP14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 RTEL1Q9NZ71 1219 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 KCTD2Q14681 263 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 SHROOM1Q2M3G4 852 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms