RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 HOMER1Q86YM7 354 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 SLC44A5Q8NCS7 719 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 NEDD1Q8NHV4 660 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 SRRTQ9BXP5 876 aaKnown RBP10.68□□□□□ -0.7
PDPN-212ENST00000621990 ZMYND12Q9H0C1 365 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 DISC1Q9NRI5 854 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 EP400Q96L91 3159 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 PLIN4Q96Q06 1357 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 AKR1B15C9JRZ8 316 aaPredicted RBP10.67□□□□□ -0.7
PDPN-212ENST00000621990 GYS1P13807 737 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 PLCG2P16885 1265 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 TXLNAP40222 546 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 BTDP43251 543 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 RHBDL3P58872 404 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 SLC4A8Q2Y0W8 1093 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 NAALADL2Q58DX5 795 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 TOGARAM2Q6ZUX3 1019 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 RPGRQ92834 1020 aaKnown RBP10.67□□□□□ -0.7
PDPN-212ENST00000621990 GJD4Q96KN9 370 aaPredicted RBP10.67□□□□□ -0.7
PDPN-212ENST00000621990 CCSER1Q9C0I3 900 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 DNAI1Q9UI46 699 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 PARP3Q9Y6F1 533 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 FLT1P17948 1338 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 CCDC194A0A1B0GVG4 234 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 KLRG2A4D1S0 409 aaPredicted RBP10.67□□□□□ -0.7
PDPN-212ENST00000621990 UFL1O94874 794 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 RPN1P04843 607 aaKnown RBP10.67□□□□□ -0.7
PDPN-212ENST00000621990 CDK8P49336 464 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 ELF2Q15723 593 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 KMT5BQ4FZB7 885 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 KLHL10Q6JEL2 608 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 DTHD1Q6ZMT9 781 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 MAPKAPK5Q8IW41 473 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 BLZF1Q9H2G9 400 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 DDX41Q9UJV9 622 aaKnown RBP10.67□□□□□ -0.7
PDPN-212ENST00000621990 CTNND2Q9UQB3 1225 aa10.67□□□□□ -0.7
PDPN-212ENST00000621990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.66□□□□□ -0.7
PDPN-212ENST00000621990 BBOX1O75936 387 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 H2AFXP16104 143 aaPredicted RBP10.66□□□□□ -0.7
PDPN-212ENST00000621990 STX17P56962 302 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 SPAG1Q07617 926 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 PAK1Q13153 545 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 KCNB1Q14721 858 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 IGSF22Q8N9C0 903 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 CCDC51Q96ER9 411 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 RBM17Q96I25 401 aaKnown RBP10.66□□□□□ -0.7
PDPN-212ENST00000621990 GPR101Q96P66 508 aaPredicted RBP10.66□□□□□ -0.7
PDPN-212ENST00000621990 OGFRQ9NZT2 677 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 GGA1Q9UJY5 639 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 C10orf71Q711Q0 1435 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 MFAP3LO75121 409 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 ST5P78524 1137 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 RBL2Q08999 1139 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 FILIP1LQ4L180 1135 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 RASGRP4Q8TDF6 673 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 TBC1D22AQ8WUA7 517 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 STAMQ92783 540 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 EYA3Q99504 573 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 ARID3AQ99856 593 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 TMEM60Q9H2L4 133 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 KBTBD4Q9NVX7 518 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 FAM53CQ9NYF3 392 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 SAP30BPQ9UHR5 308 aaKnown RBP10.66□□□□□ -0.7
PDPN-212ENST00000621990 STX8Q9UNK0 236 aa10.66□□□□□ -0.7
PDPN-212ENST00000621990 KLRF2D3W0D1 207 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 UBAP1LF5GYI3 381 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 STAT6P42226 847 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 KARSQ15046 597 aaKnown RBP10.65□□□□□ -0.7
PDPN-212ENST00000621990 KRT31Q15323 416 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 RRAGBQ5VZM2 374 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 FBXO38Q6PIJ6 1188 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 HEATR3Q7Z4Q2 680 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 SLF2Q8IX21 1173 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 TEX11Q8IYF3 940 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 LRRN4CLQ8ND94 238 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 CCDC12Q8WUD4 166 aaPredicted RBP10.65□□□□□ -0.7
PDPN-212ENST00000621990 KIFC2Q96AC6 838 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 AK8Q96MA6 479 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 MAGEF1Q9HAY2 307 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 GYPCP04921 128 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 ORC2Q13416 577 aaPredicted RBP10.65□□□□□ -0.7
PDPN-212ENST00000621990 TCP11X2Q5H9J9 407 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 CNGA4Q8IV77 575 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 ADSSL1Q8N142 457 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 TBC1D16Q8TBP0 767 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 CRAMP1Q96RY5 1269 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 CUEDC2Q9H467 287 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 POLLQ9UGP5 575 aa10.65□□□□□ -0.7
PDPN-212ENST00000621990 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.65□□□□□ -0.7
PDPN-212ENST00000621990 V9GYY5 206 aaPredicted RBP10.65□□□□□ -0.7
PDPN-212ENST00000621990 ESYT2A0FGR8 921 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 KLRC4O43908 158 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 SERPINB2P05120 415 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 PARP1P09874 1014 aaKnown RBP10.64□□□□□ -0.71
PDPN-212ENST00000621990 MAP3K9P80192 1104 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 INF2Q27J81 1249 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 KRT25Q7Z3Z0 450 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 PPFIBP1Q86W92 1011 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 NELFBQ8WX92 580 aa10.64□□□□□ -0.71
PDPN-212ENST00000621990 H7C1D1 291 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms