RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 TCP10L2B9ZVM9 353 aa19.89■□□□□ 0.77
FAM3A-222ENST00000621967 UBASH3AP57075 661 aa19.89■□□□□ 0.77
FAM3A-222ENST00000621967 GRIN1Q05586 938 aa19.89■□□□□ 0.77
FAM3A-222ENST00000621967 AMOTL1Q8IY63 956 aa19.89■□□□□ 0.77
FAM3A-222ENST00000621967 KIF18AQ8NI77 898 aa19.89■□□□□ 0.77
FAM3A-222ENST00000621967 PPP1R13BQ96KQ4 1090 aa19.89■□□□□ 0.77
FAM3A-222ENST00000621967 TAF1DQ9H5J8 278 aaPredicted RBP19.89■□□□□ 0.77
FAM3A-222ENST00000621967 MCM9Q9NXL9 1143 aa19.89■□□□□ 0.77
FAM3A-222ENST00000621967 SRPRBQ9Y5M8 271 aaKnown RBP19.89■□□□□ 0.77
FAM3A-222ENST00000621967 FOXN1O15353 648 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 NRDCO43847 1150 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 HIRAP54198 1017 aaPredicted RBP19.88■□□□□ 0.77
FAM3A-222ENST00000621967 TCP10Q12799 353 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 NR5A1Q13285 461 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 SMAP1Q8IYB5 467 aaPredicted RBP19.88■□□□□ 0.77
FAM3A-222ENST00000621967 DDX4Q9NQI0 724 aaKnown RBP19.88■□□□□ 0.77
FAM3A-222ENST00000621967 CEP131Q9UPN4 1083 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 PCDHB6Q9Y5E3 794 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 ASTN2O75129 1339 aaPredicted RBP19.88■□□□□ 0.77
FAM3A-222ENST00000621967 FGRP09769 529 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 SARSP49591 514 aaKnown RBP19.88■□□□□ 0.77
FAM3A-222ENST00000621967 PDE4BQ07343 736 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 TNFAIP1Q13829 316 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 POSTNQ15063 836 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 EAPPQ56P03 285 aaPredicted RBP19.88■□□□□ 0.77
FAM3A-222ENST00000621967 ANGEL2Q5VTE6 544 aaKnown RBP19.88■□□□□ 0.77
FAM3A-222ENST00000621967 PNMA8AQ86V59 439 aaPredicted RBP19.88■□□□□ 0.77
FAM3A-222ENST00000621967 VSTM4Q8IW00 320 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 CMTR1Q8N1G2 835 aaKnown RBP19.88■□□□□ 0.77
FAM3A-222ENST00000621967 NUP133Q8WUM0 1156 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 TMX1Q9H3N1 280 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 RRAGCQ9HB90 399 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 GGA3Q9NZ52 723 aa19.88■□□□□ 0.77
FAM3A-222ENST00000621967 ARPP21Q9UBL0 812 aaPredicted RBP19.88■□□□□ 0.77
FAM3A-222ENST00000621967 SAP30BPQ9UHR5 308 aaKnown RBP19.88■□□□□ 0.77
FAM3A-222ENST00000621967 POTECB2RU33 542 aa19.87■□□□□ 0.77
FAM3A-222ENST00000621967 TUBB4AP04350 444 aa19.87■□□□□ 0.77
FAM3A-222ENST00000621967 VEGFAP15692 232 aaPredicted RBP19.87■□□□□ 0.77
FAM3A-222ENST00000621967 TNNI2P48788 182 aa19.87■□□□□ 0.77
FAM3A-222ENST00000621967 FUT2Q10981 343 aa19.87■□□□□ 0.77
FAM3A-222ENST00000621967 SPECC1Q5M775 1068 aa19.87■□□□□ 0.77
FAM3A-222ENST00000621967 FKBP1CQ5VVH2 108 aa19.87■□□□□ 0.77
FAM3A-222ENST00000621967 OXER1Q8TDS5 423 aa19.87■□□□□ 0.77
FAM3A-222ENST00000621967 SHISA4Q96DD7 197 aa19.87■□□□□ 0.77
FAM3A-222ENST00000621967 FAM198AQ9UFP1 575 aa19.87■□□□□ 0.77
FAM3A-222ENST00000621967 MAN1B1Q9UKM7 699 aa19.87■□□□□ 0.77
FAM3A-222ENST00000621967 MINDY4BA8MYZ0 360 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 ENTPD3O75355 529 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 NPM3O75607 178 aaKnown RBP19.86■□□□□ 0.77
FAM3A-222ENST00000621967 SERPINC1P01008 464 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 PCP11498 1178 aaKnown RBP19.86■□□□□ 0.77
FAM3A-222ENST00000621967 PKN1Q16512 942 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 SLC4A8Q2Y0W8 1093 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 APOBEC3FQ8IUX4 373 aaKnown RBP19.86■□□□□ 0.77
FAM3A-222ENST00000621967 CCDC82Q8N4S0 544 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 ENAHQ8N8S7 591 aaPredicted RBP19.86■□□□□ 0.77
FAM3A-222ENST00000621967 TRIML1Q8N9V2 468 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 FANCLQ9NW38 375 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 CGNQ9P2M7 1197 aaKnown RBP19.86■□□□□ 0.77
FAM3A-222ENST00000621967 MKRN1Q9UHC7 482 aaKnown RBP19.86■□□□□ 0.77
FAM3A-222ENST00000621967 USP17L12C9JPN9 530 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 USP17L21D6R901 530 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 MORC3Q14149 939 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 ZSCAN29Q8IWY8 852 aaPredicted RBP19.86■□□□□ 0.77
FAM3A-222ENST00000621967 ZSCAN10Q96SZ4 725 aaPredicted RBP19.86■□□□□ 0.77
FAM3A-222ENST00000621967 SERTAD1Q9UHV2 236 aa19.86■□□□□ 0.77
FAM3A-222ENST00000621967 DDX60LQ5H9U9 1706 aaKnown RBP19.85■□□□□ 0.77
FAM3A-222ENST00000621967 MYH1P12882 1939 aa19.85■□□□□ 0.77
FAM3A-222ENST00000621967 POLR2DO15514 142 aaKnown RBP19.85■□□□□ 0.77
FAM3A-222ENST00000621967 ACTN4O43707 911 aaKnown RBP19.85■□□□□ 0.77
FAM3A-222ENST00000621967 PRR29P0C7W0 189 aa19.85■□□□□ 0.77
FAM3A-222ENST00000621967 NAA30Q147X3 362 aaPredicted RBP19.85■□□□□ 0.77
FAM3A-222ENST00000621967 KANK3Q6NY19 840 aa19.85■□□□□ 0.77
FAM3A-222ENST00000621967 MLKLQ8NB16 471 aa19.85■□□□□ 0.77
FAM3A-222ENST00000621967 SPATA20Q8TB22 786 aa19.85■□□□□ 0.77
FAM3A-222ENST00000621967 ERO1AQ96HE7 468 aa19.85■□□□□ 0.77
FAM3A-222ENST00000621967 PHF20Q9BVI0 1012 aa19.85■□□□□ 0.77
FAM3A-222ENST00000621967 L2HGDHQ9H9P8 463 aa19.85■□□□□ 0.77
FAM3A-222ENST00000621967 ZNF215Q9UL58 517 aaPredicted RBP19.85■□□□□ 0.77
FAM3A-222ENST00000621967 SMIM22K7EJ46 135 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 PRPF3O43395 683 aaKnown RBP19.84■□□□□ 0.77
FAM3A-222ENST00000621967 ZNF18P17022 549 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 CTR9Q6PD62 1173 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 FAM83AQ86UY5 434 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 FEZ1Q99689 392 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 ZMYND15Q9H091 742 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 NMRK2Q9NPI5 230 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 INTS13Q9NVM9 706 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 DACH1Q9UI36 760 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 CCP110O43303 1012 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 XBP1P17861 261 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 ENOX1Q8TC92 643 aaKnown RBP19.84■□□□□ 0.77
FAM3A-222ENST00000621967 ZC3H15Q8WU90 426 aaKnown RBP19.84■□□□□ 0.77
FAM3A-222ENST00000621967 FAM151AQ8WW52 585 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 SMARCE1Q969G3 411 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 DCPSQ96C86 337 aaKnown RBP19.84■□□□□ 0.77
FAM3A-222ENST00000621967 CABP5Q9NP86 173 aa19.84■□□□□ 0.77
FAM3A-222ENST00000621967 RBM28Q9NW13 759 aaKnown RBP19.84■□□□□ 0.77
FAM3A-222ENST00000621967 SCAF8Q9UPN6 1271 aaKnown RBP19.84■□□□□ 0.77
FAM3A-222ENST00000621967 PITPNM2Q9BZ72 1349 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms