RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 FAM84AQ96KN4 292 aa7.42□□□□□ -1.22
BRCA1-229ENST00000621897 SRRTQ9BXP5 876 aaKnown RBP7.42□□□□□ -1.22
BRCA1-229ENST00000621897 ZMYM5Q9UJ78 669 aa7.42□□□□□ -1.22
BRCA1-229ENST00000621897 SSU72P8A0A1W2PR75 194 aa7.41□□□□□ -1.22
BRCA1-229ENST00000621897 SHDQ96IW2 340 aa7.41□□□□□ -1.22
BRCA1-229ENST00000621897 HHIPL1Q96JK4 782 aa7.41□□□□□ -1.22
BRCA1-229ENST00000621897 CRBNQ96SW2 442 aa7.41□□□□□ -1.22
BRCA1-229ENST00000621897 ZNF214Q9UL59 606 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-229ENST00000621897 ZNF205O95201 554 aa7.4□□□□□ -1.22
BRCA1-229ENST00000621897 BMP8BP34820 402 aa7.4□□□□□ -1.22
BRCA1-229ENST00000621897 CEBPAP49715 358 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-229ENST00000621897 CHRNEQ04844 493 aa7.4□□□□□ -1.22
BRCA1-229ENST00000621897 KSR1Q8IVT5 923 aa7.4□□□□□ -1.22
BRCA1-229ENST00000621897 SMARCC1Q92922 1105 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-229ENST00000621897 BRF1Q92994 677 aa7.4□□□□□ -1.22
BRCA1-229ENST00000621897 GP6Q9HCN6 339 aa7.4□□□□□ -1.22
BRCA1-229ENST00000621897 PRR13Q9NZ81 148 aa7.4□□□□□ -1.22
BRCA1-229ENST00000621897 GPR160Q9UJ42 338 aa7.4□□□□□ -1.22
BRCA1-229ENST00000621897 PCDHB10Q9UN67 800 aa7.4□□□□□ -1.22
BRCA1-229ENST00000621897 INPP5FQ9Y2H2 1132 aa7.4□□□□□ -1.22
BRCA1-229ENST00000621897 A0A1W2PQH9 124 aa7.39□□□□□ -1.23
BRCA1-229ENST00000621897 ZNF445P59923 1031 aa7.39□□□□□ -1.23
BRCA1-229ENST00000621897 ANKRD39Q53RE8 183 aa7.39□□□□□ -1.23
BRCA1-229ENST00000621897 SPPL2CQ8IUH8 684 aa7.39□□□□□ -1.23
BRCA1-229ENST00000621897 FAM169BQ8N8A8 192 aa7.39□□□□□ -1.23
BRCA1-229ENST00000621897 DSCC1Q9BVC3 393 aa7.39□□□□□ -1.23
BRCA1-229ENST00000621897 CCSER2Q9H7U1 834 aa7.39□□□□□ -1.23
BRCA1-229ENST00000621897 ZNF451Q9Y4E5 1061 aa7.39□□□□□ -1.23
BRCA1-229ENST00000621897 H0Y8X5 98 aa7.38□□□□□ -1.23
BRCA1-229ENST00000621897 CBFA2T2O43439 604 aa7.38□□□□□ -1.23
BRCA1-229ENST00000621897 VAV1P15498 845 aa7.38□□□□□ -1.23
BRCA1-229ENST00000621897 CD247P20963 164 aa7.38□□□□□ -1.23
BRCA1-229ENST00000621897 RTP2Q5QGT7 225 aa7.38□□□□□ -1.23
BRCA1-229ENST00000621897 SYDE1Q6ZW31 735 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-229ENST00000621897 SIRT2Q8IXJ6 389 aa7.38□□□□□ -1.23
BRCA1-229ENST00000621897 INTS4Q96HW7 963 aaKnown RBP7.38□□□□□ -1.23
BRCA1-229ENST00000621897 EPB41L4BQ9H329 900 aa7.38□□□□□ -1.23
BRCA1-229ENST00000621897 CWC22Q9HCG8 908 aaKnown RBP7.38□□□□□ -1.23
BRCA1-229ENST00000621897 DCP1AQ9NPI6 582 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-229ENST00000621897 AP5S1Q9NUS5 200 aa7.38□□□□□ -1.23
BRCA1-229ENST00000621897 ERVK13-1Q9NX77 482 aa7.38□□□□□ -1.23
BRCA1-229ENST00000621897 YBX2Q9Y2T7 364 aaKnown RBP7.38□□□□□ -1.23
BRCA1-229ENST00000621897 KRT1P04264 644 aa7.37□□□□□ -1.23
BRCA1-229ENST00000621897 GSNP06396 782 aa7.37□□□□□ -1.23
BRCA1-229ENST00000621897 KIR2DL1P43626 348 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-229ENST00000621897 KIR2DL2P43627 348 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-229ENST00000621897 JAG1P78504 1218 aa7.37□□□□□ -1.23
BRCA1-229ENST00000621897 KIR3DS1Q14943 382 aa7.37□□□□□ -1.23
BRCA1-229ENST00000621897 CEP128Q6ZU80 1094 aa7.37□□□□□ -1.23
BRCA1-229ENST00000621897 NLRX1Q86UT6 975 aa7.37□□□□□ -1.23
BRCA1-229ENST00000621897 C19orf47Q8N9M1 422 aaKnown RBP7.37□□□□□ -1.23
BRCA1-229ENST00000621897 FBXO15Q8NCQ5 510 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-229ENST00000621897 OR6P1Q8NGX9 317 aa7.37□□□□□ -1.23
BRCA1-229ENST00000621897 SEC16BQ96JE7 1060 aa7.37□□□□□ -1.23
BRCA1-229ENST00000621897 FCRL2Q96LA5 508 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-229ENST00000621897 SLC38A3Q99624 504 aa7.37□□□□□ -1.23
BRCA1-229ENST00000621897 PLCD4Q9BRC7 762 aa7.37□□□□□ -1.23
BRCA1-229ENST00000621897 CDADC1Q9BWV3 514 aa7.37□□□□□ -1.23
BRCA1-229ENST00000621897 GPR55Q9Y2T6 319 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-229ENST00000621897 FADS2P1A8MWK0 482 aa7.36□□□□□ -1.23
BRCA1-229ENST00000621897 NRDCO43847 1150 aa7.36□□□□□ -1.23
BRCA1-229ENST00000621897 TCF3P15923 654 aa7.36□□□□□ -1.23
BRCA1-229ENST00000621897 ERCC5P28715 1186 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-229ENST00000621897 GNPTABQ3T906 1256 aa7.36□□□□□ -1.23
BRCA1-229ENST00000621897 NOL9Q5SY16 702 aaKnown RBP7.36□□□□□ -1.23
BRCA1-229ENST00000621897 FIBCD1Q8N539 461 aa7.36□□□□□ -1.23
BRCA1-229ENST00000621897 SLC12A9Q9BXP2 914 aa7.36□□□□□ -1.23
BRCA1-229ENST00000621897 SLC6A17Q9H1V8 727 aa7.36□□□□□ -1.23
BRCA1-229ENST00000621897 ATF4P18848 351 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-229ENST00000621897 SNX17Q15036 470 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 SLC14A2Q15849 920 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 PPP2R5EQ16537 467 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 IRF2BP1Q8IU81 584 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 TMEM52Q8NDY8 209 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 CPLX3Q8WVH0 158 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 KLHL6Q8WZ60 621 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 HAUS7Q99871 368 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 KRTAP9-9Q9BYP9 154 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 KRTAP9-4Q9BYQ2 154 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 KLHL25Q9H0H3 589 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 NOL6Q9H6R4 1146 aaKnown RBP7.35□□□□□ -1.23
BRCA1-229ENST00000621897 FHOD1Q9Y613 1164 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 SLC12A7Q9Y666 1083 aa7.35□□□□□ -1.23
BRCA1-229ENST00000621897 GSTM1P09488 218 aa7.34□□□□□ -1.23
BRCA1-229ENST00000621897 C1QTNF9P0C862 333 aa7.34□□□□□ -1.23
BRCA1-229ENST00000621897 ITGA4P13612 1032 aa7.34□□□□□ -1.23
BRCA1-229ENST00000621897 RTP1P59025 263 aa7.34□□□□□ -1.23
BRCA1-229ENST00000621897 PKN1Q16512 942 aa7.34□□□□□ -1.23
BRCA1-229ENST00000621897 HSF5Q4G112 596 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-229ENST00000621897 SLCO6A1Q86UG4 719 aa7.34□□□□□ -1.23
BRCA1-229ENST00000621897 CILP2Q8IUL8 1156 aa7.34□□□□□ -1.23
BRCA1-229ENST00000621897 ADCY4Q8NFM4 1077 aa7.34□□□□□ -1.23
BRCA1-229ENST00000621897 ANAPC16Q96DE5 110 aa7.34□□□□□ -1.23
BRCA1-229ENST00000621897 PHAXQ9H814 394 aaKnown RBP7.34□□□□□ -1.23
BRCA1-229ENST00000621897 TSPAN15O95858 294 aa7.33□□□□□ -1.24
BRCA1-229ENST00000621897 RBM25P49756 843 aaKnown RBP7.33□□□□□ -1.24
BRCA1-229ENST00000621897 CASP7P55210 303 aa7.33□□□□□ -1.24
BRCA1-229ENST00000621897 SLC7A5Q01650 507 aa7.33□□□□□ -1.24
BRCA1-229ENST00000621897 CWF19L1Q69YN2 538 aaKnown RBP7.33□□□□□ -1.24
BRCA1-229ENST00000621897 ZNF605Q86T29 641 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms