RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 FEM1BQ9UK73 627 aa21.26■□□□□ 0.99
SCAMP4-213ENST00000621748 NOVP48745 357 aa21.25■□□□□ 0.99
SCAMP4-213ENST00000621748 MFAP1P55081 439 aaKnown RBP21.25■□□□□ 0.99
SCAMP4-213ENST00000621748 RRP12Q5JTH9 1297 aaKnown RBP21.25■□□□□ 0.99
SCAMP4-213ENST00000621748 MMP19Q99542 508 aa21.25■□□□□ 0.99
SCAMP4-213ENST00000621748 TEX13BQ9BXU2 312 aa21.25■□□□□ 0.99
SCAMP4-213ENST00000621748 TOMM22Q9NS69 142 aa21.25■□□□□ 0.99
SCAMP4-213ENST00000621748 RIPK3Q9Y572 518 aa21.25■□□□□ 0.99
SCAMP4-213ENST00000621748 ALPK3Q96L96 1907 aa21.25■□□□□ 0.99
SCAMP4-213ENST00000621748 PGK2P07205 417 aa21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 GSPT1P15170 499 aaKnown RBP21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 MCCP23508 829 aa21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 PPP4R3BQ5MIZ7 849 aa21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 SNRNP48Q6IEG0 339 aaKnown RBP21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 CPXCR1Q8N123 301 aa21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 GMCL1Q96IK5 515 aa21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 MAML3Q96JK9 1138 aa21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 SLC38A10Q9HBR0 1119 aa21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 PPP4R2Q9NY27 417 aa21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 SLC5A4Q9NY91 659 aa21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 PLXNA1Q9UIW2 1896 aa21.24■□□□□ 0.99
SCAMP4-213ENST00000621748 FRMPD3Q5JV73 1810 aa21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 TMEM232C9JQI7 657 aa21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 HIP1O00291 1037 aa21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 ATP2A1O14983 1001 aa21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 ZBED4O75132 1171 aa21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 CYBAP13498 195 aa21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 CNGA1P29973 690 aa21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 COPB2P35606 906 aa21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 SLC1A4P43007 532 aa21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 KCTD2Q14681 263 aa21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 TBC1D10CQ8IV04 446 aa21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 RAVER2Q9HCJ3 691 aaKnown RBP21.23■□□□□ 0.99
SCAMP4-213ENST00000621748 SLC4A3P48751 1232 aa21.22■□□□□ 0.99
SCAMP4-213ENST00000621748 AKNAD1Q5T1N1 836 aa21.22■□□□□ 0.99
SCAMP4-213ENST00000621748 TTC22Q5TAA0 569 aa21.22■□□□□ 0.99
SCAMP4-213ENST00000621748 RASGRP2Q7LDG7 609 aa21.22■□□□□ 0.99
SCAMP4-213ENST00000621748 STAG1Q8WVM7 1258 aa21.22■□□□□ 0.99
SCAMP4-213ENST00000621748 DDX20Q9UHI6 824 aaKnown RBP21.22■□□□□ 0.99
SCAMP4-213ENST00000621748 ISY1Q9ULR0 285 aaKnown RBP21.22■□□□□ 0.99
SCAMP4-213ENST00000621748 SMCHD1A6NHR9 2005 aa21.22■□□□□ 0.99
SCAMP4-213ENST00000621748 STAT2P52630 851 aa21.21■□□□□ 0.99
SCAMP4-213ENST00000621748 ZNF792Q3KQV3 632 aa21.21■□□□□ 0.99
SCAMP4-213ENST00000621748 PRAMEF19Q5SWL8 479 aa21.21■□□□□ 0.99
SCAMP4-213ENST00000621748 RCSD1Q6JBY9 416 aa21.21■□□□□ 0.99
SCAMP4-213ENST00000621748 MFSD6Q6ZSS7 791 aa21.21■□□□□ 0.99
SCAMP4-213ENST00000621748 KCTD1Q719H9 257 aa21.21■□□□□ 0.99
SCAMP4-213ENST00000621748 IL25Q9H293 177 aa21.21■□□□□ 0.99
SCAMP4-213ENST00000621748 C11orf49Q9H6J7 331 aa21.21■□□□□ 0.99
SCAMP4-213ENST00000621748 TCP11L1Q9NUJ3 509 aa21.21■□□□□ 0.99
SCAMP4-213ENST00000621748 CTDP1Q9Y5B0 961 aaPredicted RBP21.21■□□□□ 0.99
SCAMP4-213ENST00000621748 ZNF213O14771 459 aa21.2■□□□□ 0.98
SCAMP4-213ENST00000621748 CHURC1Q8WUH1 139 aa21.2■□□□□ 0.98
SCAMP4-213ENST00000621748 TMEM47Q9BQJ4 181 aa21.2■□□□□ 0.98
SCAMP4-213ENST00000621748 MTMR7Q9Y216 660 aa21.2■□□□□ 0.98
SCAMP4-213ENST00000621748 EVI5O60447 810 aa21.19■□□□□ 0.98
SCAMP4-213ENST00000621748 MSCO60682 206 aa21.19■□□□□ 0.98
SCAMP4-213ENST00000621748 PCP11498 1178 aaKnown RBP21.19■□□□□ 0.98
SCAMP4-213ENST00000621748 FAM160B2Q86V87 743 aa21.19■□□□□ 0.98
SCAMP4-213ENST00000621748 DSCC1Q9BVC3 393 aa21.19■□□□□ 0.98
SCAMP4-213ENST00000621748 COLQQ9Y215 455 aaPredicted RBP21.19■□□□□ 0.98
SCAMP4-213ENST00000621748 DIS3Q9Y2L1 958 aaKnown RBP21.19■□□□□ 0.98
SCAMP4-213ENST00000621748 NR2E3Q9Y5X4 410 aa21.19■□□□□ 0.98
SCAMP4-213ENST00000621748 PFASO15067 1338 aa21.19■□□□□ 0.98
SCAMP4-213ENST00000621748 LAMA4Q16363 1823 aa21.18■□□□□ 0.98
SCAMP4-213ENST00000621748 PLA2G6O60733 806 aa21.18■□□□□ 0.98
SCAMP4-213ENST00000621748 FDX1P10109 184 aa21.18■□□□□ 0.98
SCAMP4-213ENST00000621748 TOP1P11387 765 aaKnown RBP21.18■□□□□ 0.98
SCAMP4-213ENST00000621748 COL6A1P12109 1028 aa21.18■□□□□ 0.98
SCAMP4-213ENST00000621748 OAZ1P54368 228 aa21.18■□□□□ 0.98
SCAMP4-213ENST00000621748 IKQ13123 557 aaPredicted RBP21.18■□□□□ 0.98
SCAMP4-213ENST00000621748 RNF41Q9H4P4 317 aaPredicted RBP21.18■□□□□ 0.98
SCAMP4-213ENST00000621748 NEDD4P46934 1319 aa21.18■□□□□ 0.98
SCAMP4-213ENST00000621748 DNAJC25-GNG10A0A024R161 153 aa21.17■□□□□ 0.98
SCAMP4-213ENST00000621748 SEPT4O43236 478 aa21.17■□□□□ 0.98
SCAMP4-213ENST00000621748 SNAP25P60880 206 aa21.17■□□□□ 0.98
SCAMP4-213ENST00000621748 HABP4Q5JVS0 413 aaKnown RBP21.17■□□□□ 0.98
SCAMP4-213ENST00000621748 ANO1Q5XXA6 986 aa21.17■□□□□ 0.98
SCAMP4-213ENST00000621748 DCAF4Q8WV16 495 aa21.17■□□□□ 0.98
SCAMP4-213ENST00000621748 DDX11Q96FC9 970 aa21.17■□□□□ 0.98
SCAMP4-213ENST00000621748 TINF2Q9BSI4 451 aa21.17■□□□□ 0.98
SCAMP4-213ENST00000621748 PRR12Q9ULL5 1215 aa21.17■□□□□ 0.98
SCAMP4-213ENST00000621748 ZNF536O15090 1300 aa21.17■□□□□ 0.98
SCAMP4-213ENST00000621748 DNAH12Q6ZR08 3092 aa21.17■□□□□ 0.98
SCAMP4-213ENST00000621748 TTBK2Q6IQ55 1244 aa21.16■□□□□ 0.98
SCAMP4-213ENST00000621748 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.16■□□□□ 0.98
SCAMP4-213ENST00000621748 CENPQQ7L2Z9 268 aaPredicted RBP21.16■□□□□ 0.98
SCAMP4-213ENST00000621748 CHST13Q8NET6 341 aa21.16■□□□□ 0.98
SCAMP4-213ENST00000621748 AGBL1Q96MI9 1066 aa21.16■□□□□ 0.98
SCAMP4-213ENST00000621748 RANBP2P49792 3224 aaKnown RBP21.16■□□□□ 0.98
SCAMP4-213ENST00000621748 TRIOBPQ9H2D6 2365 aa21.16■□□□□ 0.98
SCAMP4-213ENST00000621748 TAL1P17542 331 aaPredicted RBP21.15■□□□□ 0.98
SCAMP4-213ENST00000621748 CCDC96Q2M329 555 aa21.15■□□□□ 0.98
SCAMP4-213ENST00000621748 CHRDL2Q6WN34 429 aa21.15■□□□□ 0.98
SCAMP4-213ENST00000621748 ESR2Q92731 530 aa21.15■□□□□ 0.98
SCAMP4-213ENST00000621748 TTC14Q96N46 770 aa21.15■□□□□ 0.98
SCAMP4-213ENST00000621748 ZKSCAN3Q9BRR0 538 aa21.15■□□□□ 0.98
SCAMP4-213ENST00000621748 HOMER2Q9NSB8 354 aa21.15■□□□□ 0.98
SCAMP4-213ENST00000621748 SLC34A2O95436 690 aa21.14■□□□□ 0.97
SCAMP4-213ENST00000621748 CHMLP26374 656 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms