RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 STXBP3O00186 592 aa21.44■■□□□ 1.02
SEMA6C-210ENST00000621728 TRAF5O00463 557 aa21.44■■□□□ 1.02
SEMA6C-210ENST00000621728 PRPF40AO75400 957 aaKnown RBP21.44■■□□□ 1.02
SEMA6C-210ENST00000621728 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.44■■□□□ 1.02
SEMA6C-210ENST00000621728 NMRK2Q9NPI5 230 aa21.44■■□□□ 1.02
SEMA6C-210ENST00000621728 PICK1Q9NRD5 415 aa21.44■■□□□ 1.02
SEMA6C-210ENST00000621728 RBM27Q9P2N5 1060 aaKnown RBP21.44■■□□□ 1.02
SEMA6C-210ENST00000621728 SYNPO2Q9UMS6 1093 aa21.44■■□□□ 1.02
SEMA6C-210ENST00000621728 PPP1R11O60927 126 aaPredicted RBP21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 CEBPZQ03701 1054 aaKnown RBP21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 IKQ13123 557 aaPredicted RBP21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 NOM1Q5C9Z4 860 aaKnown RBP21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 LMBRD1Q9NUN5 540 aa21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 XBP1P17861 261 aa21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 SPP2Q13103 211 aa21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 MTMR2Q13614 643 aa21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 GNL2Q13823 731 aaKnown RBP21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 VGLL4Q14135 290 aa21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 RGS22Q8NE09 1264 aa21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 SH2D4AQ9H788 454 aa21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 GINM1Q9NU53 330 aa21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 BARHL2Q9NY43 387 aa21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 SEC63Q9UGP8 760 aaKnown RBP21.43■■□□□ 1.02
SEMA6C-210ENST00000621728 FAM205CA6NFA0 338 aa21.42■■□□□ 1.02
SEMA6C-210ENST00000621728 GOLGA6L22H0YM25 854 aa21.42■■□□□ 1.02
SEMA6C-210ENST00000621728 U2AF2P26368 475 aaKnown RBP eCLIP21.42■■□□□ 1.02
SEMA6C-210ENST00000621728 NLRP5P59047 1200 aa21.42■■□□□ 1.02
SEMA6C-210ENST00000621728 TPRNQ4KMQ1 711 aa21.42■■□□□ 1.02
SEMA6C-210ENST00000621728 CNKSR2Q8WXI2 1034 aa21.42■■□□□ 1.02
SEMA6C-210ENST00000621728 COA7Q96BR5 231 aa21.42■■□□□ 1.02
SEMA6C-210ENST00000621728 SNCAIPQ9Y6H5 919 aa21.42■■□□□ 1.02
SEMA6C-210ENST00000621728 ZHX2Q9Y6X8 837 aa21.42■■□□□ 1.02
SEMA6C-210ENST00000621728 TRIM75PA6NK02 468 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 SAFBQ15424 915 aaKnown RBP eCLIP21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 EARS2Q5JPH6 523 aaKnown RBP21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 NOL9Q5SY16 702 aaKnown RBP21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 MTMR8Q96EF0 704 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 USP28Q96RU2 1077 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 KIAA1683Q9H0B3 1180 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 DCAF8L1A6NGE4 600 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 PPP1R12BO60237 982 aaPredicted RBP21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 TAL1P17542 331 aaPredicted RBP21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 KRT85P78386 507 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 MAP3K9P80192 1104 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 SYDE2Q5VT97 1194 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 MYSM1Q5VVJ2 828 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 SAMD1Q6SPF0 538 aaPredicted RBP21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 BRAPQ7Z569 592 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 CLMNQ96JQ2 1002 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 FBXO28Q9NVF7 368 aa21.41■■□□□ 1.02
SEMA6C-210ENST00000621728 GADD45BO75293 160 aaPredicted RBP21.4■■□□□ 1.02
SEMA6C-210ENST00000621728 KRT2P35908 639 aa21.4■■□□□ 1.02
SEMA6C-210ENST00000621728 NAPAP54920 295 aa21.4■■□□□ 1.02
SEMA6C-210ENST00000621728 TTLL12Q14166 644 aaPredicted RBP21.4■■□□□ 1.02
SEMA6C-210ENST00000621728 QRICH1Q2TAL8 776 aa21.4■■□□□ 1.02
SEMA6C-210ENST00000621728 NOSTRINQ8IVI9 506 aa21.4■■□□□ 1.02
SEMA6C-210ENST00000621728 WDR18Q9BV38 432 aa21.4■■□□□ 1.02
SEMA6C-210ENST00000621728 EMILIN3Q9NT22 766 aa21.4■■□□□ 1.02
SEMA6C-210ENST00000621728 PNMA6FA0A0J9YX94 578 aa21.39■■□□□ 1.02
SEMA6C-210ENST00000621728 CDC37Q16543 378 aaPredicted RBP21.39■■□□□ 1.02
SEMA6C-210ENST00000621728 BTNL9Q6UXG8 535 aa21.39■■□□□ 1.02
SEMA6C-210ENST00000621728 ZNF280CQ8ND82 737 aa21.39■■□□□ 1.02
SEMA6C-210ENST00000621728 FOXP1Q9H334 677 aaPredicted RBP21.39■■□□□ 1.02
SEMA6C-210ENST00000621728 ZNF408Q9H9D4 720 aa21.39■■□□□ 1.02
SEMA6C-210ENST00000621728 SH3GLB2Q9NR46 395 aa21.39■■□□□ 1.02
SEMA6C-210ENST00000621728 PRR12Q9ULL5 1215 aa21.39■■□□□ 1.02
SEMA6C-210ENST00000621728 ZBTB5O15062 677 aa21.39■■□□□ 1.01
SEMA6C-210ENST00000621728 NF2P35240 595 aa21.39■■□□□ 1.01
SEMA6C-210ENST00000621728 RASGRP4Q8TDF6 673 aa21.39■■□□□ 1.01
SEMA6C-210ENST00000621728 STAT2P52630 851 aa21.38■■□□□ 1.01
SEMA6C-210ENST00000621728 TNFRSF25Q93038 417 aa21.38■■□□□ 1.01
SEMA6C-210ENST00000621728 ELP3Q9H9T3 547 aa21.38■■□□□ 1.01
SEMA6C-210ENST00000621728 CLIC4Q9Y696 253 aa21.38■■□□□ 1.01
SEMA6C-210ENST00000621728 IREB2P48200 963 aaKnown RBP21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 BACE1P56817 501 aa21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 LEO1Q8WVC0 666 aaPredicted RBP21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 KIFC2Q96AC6 838 aa21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 AS3MTQ9HBK9 375 aa21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 SMCHD1A6NHR9 2005 aa21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 FSD2A1L4K1 749 aa21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 VCAM1P19320 739 aa21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 HMGCS2P54868 508 aa21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 TMEM87AQ8NBN3 555 aa21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 SPATA32Q96LK8 384 aa21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 ZNF396Q96N95 335 aaPredicted RBP21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 AFG3L2Q9Y4W6 797 aa21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 CSADQ9Y600 493 aa21.37■■□□□ 1.01
SEMA6C-210ENST00000621728 TOB1P50616 345 aaPredicted RBP21.36■■□□□ 1.01
SEMA6C-210ENST00000621728 BLIDQ8IZY5 108 aa21.36■■□□□ 1.01
SEMA6C-210ENST00000621728 CCDC148Q8NFR7 591 aa21.36■■□□□ 1.01
SEMA6C-210ENST00000621728 PCDHA4Q9UN74 947 aa21.36■■□□□ 1.01
SEMA6C-210ENST00000621728 GOLGA6L3A6NEY3 463 aa21.35■■□□□ 1.01
SEMA6C-210ENST00000621728 SMCO2A6NFE2 343 aa21.35■■□□□ 1.01
SEMA6C-210ENST00000621728 ZMYND12Q9H0C1 365 aa21.35■■□□□ 1.01
SEMA6C-210ENST00000621728 BRMS1Q9HCU9 246 aa21.35■■□□□ 1.01
SEMA6C-210ENST00000621728 PTPRFP10586 1907 aa21.35■■□□□ 1.01
SEMA6C-210ENST00000621728 M0R2N6 131 aa21.35■■□□□ 1.01
SEMA6C-210ENST00000621728 WNT7AO00755 349 aa21.35■■□□□ 1.01
SEMA6C-210ENST00000621728 WDR46O15213 610 aaKnown RBP21.35■■□□□ 1.01
SEMA6C-210ENST00000621728 ATP2B1P20020 1258 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms