RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 TAL1P17542 331 aaPredicted RBP13.7□□□□□ -0.22
CPNE3-210ENST00000621245 ATN1P54259 1190 aaPredicted RBP13.7□□□□□ -0.22
CPNE3-210ENST00000621245 OLFML2BQ68BL8 750 aa13.7□□□□□ -0.22
CPNE3-210ENST00000621245 CCDC129Q6ZRS4 1044 aa13.7□□□□□ -0.22
CPNE3-210ENST00000621245 RASGRP2Q7LDG7 609 aa13.7□□□□□ -0.22
CPNE3-210ENST00000621245 AMOTL1Q8IY63 956 aa13.7□□□□□ -0.22
CPNE3-210ENST00000621245 MB21D1Q8N884 522 aa13.7□□□□□ -0.22
CPNE3-210ENST00000621245 LENG1Q96BZ8 264 aaPredicted RBP13.7□□□□□ -0.22
CPNE3-210ENST00000621245 MAML3Q96JK9 1138 aa13.7□□□□□ -0.22
CPNE3-210ENST00000621245 SENP6Q9GZR1 1112 aaPredicted RBP13.7□□□□□ -0.22
CPNE3-210ENST00000621245 SH2D4AQ9H788 454 aa13.7□□□□□ -0.22
CPNE3-210ENST00000621245 KANSL2Q9H9L4 492 aa13.7□□□□□ -0.22
CPNE3-210ENST00000621245 PPP1R9AQ9ULJ8 1098 aa13.7□□□□□ -0.22
CPNE3-210ENST00000621245 TACC3Q9Y6A5 838 aa13.7□□□□□ -0.22
CPNE3-210ENST00000621245 VWA5AO00534 786 aa13.69□□□□□ -0.22
CPNE3-210ENST00000621245 NDUFB10O96000 172 aa13.69□□□□□ -0.22
CPNE3-210ENST00000621245 LRRC47Q8N1G4 583 aaKnown RBP13.69□□□□□ -0.22
CPNE3-210ENST00000621245 CEP95Q96GE4 821 aa13.69□□□□□ -0.22
CPNE3-210ENST00000621245 DDRGK1Q96HY6 314 aa13.69□□□□□ -0.22
CPNE3-210ENST00000621245 GPATCH3Q96I76 525 aa13.69□□□□□ -0.22
CPNE3-210ENST00000621245 MROH8Q9H579 483 aa13.69□□□□□ -0.22
CPNE3-210ENST00000621245 RIPK3Q9Y572 518 aa13.69□□□□□ -0.22
CPNE3-210ENST00000621245 BMP8BP34820 402 aa13.68□□□□□ -0.22
CPNE3-210ENST00000621245 TDO2P48775 406 aa13.68□□□□□ -0.22
CPNE3-210ENST00000621245 MDM2Q00987 491 aaPredicted RBP13.68□□□□□ -0.22
CPNE3-210ENST00000621245 FAM47AQ5JRC9 791 aa13.68□□□□□ -0.22
CPNE3-210ENST00000621245 RIOX2Q8IUF8 465 aa13.68□□□□□ -0.22
CPNE3-210ENST00000621245 IFNL3Q8IZI9 196 aa13.68□□□□□ -0.22
CPNE3-210ENST00000621245 CHMP4CQ96CF2 233 aa13.68□□□□□ -0.22
CPNE3-210ENST00000621245 MMP19Q99542 508 aa13.68□□□□□ -0.22
CPNE3-210ENST00000621245 MKNK2Q9HBH9 465 aa13.68□□□□□ -0.22
CPNE3-210ENST00000621245 GOPCQ9HD26 462 aa13.68□□□□□ -0.22
CPNE3-210ENST00000621245 INCENPQ9NQS7 918 aa13.68□□□□□ -0.22
CPNE3-210ENST00000621245 LAMA4Q16363 1823 aa13.68□□□□□ -0.22
CPNE3-210ENST00000621245 TTC41PQ6P2S7 1318 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 A0A1W2PPC1 479 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 F5H6K3 240 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 DNM1LO00429 736 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 STRNO43815 780 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 FCER1AP12319 257 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 KLRC3Q07444 240 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 ZMYM1Q5SVZ6 1142 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 GIMAP6Q6P9H5 292 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 Q7L0L9 218 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 ABRAQ8N0Z2 381 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 FSD1Q9BTV5 496 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 CLIP2Q9UDT6 1046 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 PLIN4Q96Q06 1357 aa13.67□□□□□ -0.22
CPNE3-210ENST00000621245 SEPT4O43236 478 aa13.66□□□□□ -0.22
CPNE3-210ENST00000621245 APPP05067 770 aa13.66□□□□□ -0.22
CPNE3-210ENST00000621245 ZFYP08048 801 aaPredicted RBP13.66□□□□□ -0.22
CPNE3-210ENST00000621245 MX1P20591 662 aa13.66□□□□□ -0.22
CPNE3-210ENST00000621245 STAT3P40763 770 aa13.66□□□□□ -0.22
CPNE3-210ENST00000621245 RTP1P59025 263 aa13.66□□□□□ -0.22
CPNE3-210ENST00000621245 ZNF792Q3KQV3 632 aa13.66□□□□□ -0.22
CPNE3-210ENST00000621245 VPS53Q5VIR6 699 aa13.66□□□□□ -0.22
CPNE3-210ENST00000621245 FGD4Q96M96 766 aa13.66□□□□□ -0.22
CPNE3-210ENST00000621245 SLF1Q9BQI6 1058 aa13.66□□□□□ -0.22
CPNE3-210ENST00000621245 NYAP2Q9P242 653 aa13.66□□□□□ -0.22
CPNE3-210ENST00000621245 CHD9Q3L8U1 2897 aa13.66□□□□□ -0.22
CPNE3-210ENST00000621245 REV3LO60673 3130 aa13.65□□□□□ -0.22
CPNE3-210ENST00000621245 PATL2C9JE40 543 aaKnown RBP13.65□□□□□ -0.22
CPNE3-210ENST00000621245 IRX5P78411 483 aaPredicted RBP13.65□□□□□ -0.22
CPNE3-210ENST00000621245 LRRC41Q15345 812 aa13.65□□□□□ -0.22
CPNE3-210ENST00000621245 SNRNP48Q6IEG0 339 aaKnown RBP13.65□□□□□ -0.22
CPNE3-210ENST00000621245 TDHQ8IZJ6 230 aa13.65□□□□□ -0.22
CPNE3-210ENST00000621245 FERMT2Q96AC1 680 aa13.65□□□□□ -0.22
CPNE3-210ENST00000621245 UBE2OQ9C0C9 1292 aaKnown RBP13.65□□□□□ -0.22
CPNE3-210ENST00000621245 MTMR4Q9NYA4 1195 aa13.65□□□□□ -0.22
CPNE3-210ENST00000621245 ADCY6O43306 1168 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 NMT2O60551 498 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 MSCO60682 206 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 SLC25A27O95847 323 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 ZNF865P0CJ78 1059 aaPredicted RBP13.64□□□□□ -0.23
CPNE3-210ENST00000621245 ADCYAP1R1P41586 468 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 SLC4A3P48751 1232 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 CTDSPL2Q05D32 466 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 PPARAQ07869 468 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 TRIM60Q495X7 471 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 KIFC2Q96AC6 838 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 TINF2Q9BSI4 451 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 RAVER2Q9HCJ3 691 aaKnown RBP13.64□□□□□ -0.23
CPNE3-210ENST00000621245 ATP11BQ9Y2G3 1177 aa13.64□□□□□ -0.23
CPNE3-210ENST00000621245 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
CPNE3-210ENST00000621245 DDX49Q9Y6V7 483 aaKnown RBP13.64□□□□□ -0.23
CPNE3-210ENST00000621245 PGK1P00558 417 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 GNAT2P19087 354 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 SNAP25P60880 206 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 KCTD2Q14681 263 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 ANKRD45Q5TZF3 282 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 SLC39A5Q6ZMH5 540 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 SH3RF1Q7Z6J0 888 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 CPXCR1Q8N123 301 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 NEDD1Q8NHV4 660 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 MKL1Q969V6 931 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 FAM227BQ96M60 508 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 TEX13BQ9BXU2 312 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 GTF3C3Q9Y5Q9 886 aa13.63□□□□□ -0.23
CPNE3-210ENST00000621245 DNAJC25-GNG10A0A024R161 153 aa13.62□□□□□ -0.23
CPNE3-210ENST00000621245 A0A0D9SFI3 127 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms