RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 KRT12Q99456 494 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 TRIM6Q9C030 488 aaPredicted RBP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 AMFRQ9UKV5 643 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 STX8Q9UNK0 236 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 PPIP5K2O43314 1243 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 EN1Q05925 392 aaPredicted RBP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 TEDDM1Q5T9Z0 273 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 N4BP2L2Q92802 583 aaPredicted RBP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 POLR3CQ9BUI4 534 aaPredicted RBP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 ATG3Q9NT62 314 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 CUTAO60888 179 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 TBC1D8O95759 1140 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 KRT4P19013 534 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 SUPT20HQ8NEM7 779 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 PPP2R3CQ969Q6 453 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 CSRNP1Q96S65 589 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 IPO11Q9UI26 975 aaKnown RBP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 JAG2Q9Y219 1238 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 ANKRD36BQ8N2N9 1353 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 PLCG2P16885 1265 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 DPP8Q6V1X1 898 aaPredicted RBP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 FAM96AQ9H5X1 160 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 RNF14Q9UBS8 474 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 NUB1Q9Y5A7 615 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 PYGLP06737 847 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 TSPY3P0CV98 308 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 TSPY8P0CW00 308 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 NAPAP54920 295 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 NLRP12P59046 1061 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 KRT80Q6KB66 452 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 PDZD4Q76G19 769 aaPredicted RBP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 BRF1Q92994 677 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 TIAM1Q13009 1591 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 UBXN2AP68543 259 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 FANCCQ00597 558 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 PAK1Q13153 545 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 JADE1Q6IE81 842 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 ARHGEF18Q6ZSZ5 1173 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 ZNF277Q9NRM2 450 aaPredicted RBP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 MAP3K2Q9Y2U5 619 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 MAGEA9P43362 315 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 CCDC157Q569K6 752 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 ELMSAN1Q6PJG2 1045 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 UBAP1Q9NZ09 502 aa7.86□□□□□ -1.15
COLCA1-205ENST00000620864 SOS1Q07889 1333 aaPredicted RBP7.86□□□□□ -1.15
COLCA1-205ENST00000620864 HARSP12081 509 aaKnown RBP7.85□□□□□ -1.15
COLCA1-205ENST00000620864 LIG3P49916 1009 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 TAF11Q15544 211 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 PALM2Q8IXS6 379 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 CDKL2Q92772 493 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 GINS2Q9Y248 185 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 SERPINB10P48595 397 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 CTCFP49711 727 aaPredicted RBP7.85□□□□□ -1.15
COLCA1-205ENST00000620864 MMEL1Q495T6 779 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 C16orf87Q6PH81 154 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 FNBP1Q96RU3 617 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 HTATIP2Q9BUP3 242 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 BCL2L12Q9HB09 334 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 MID2Q9UJV3 735 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 MAD1L1Q9Y6D9 718 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 DUOX2Q9NRD8 1548 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 KIAA0556O60303 1618 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 CHUKO15111 745 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 TFRCP02786 760 aaKnown RBP7.85□□□□□ -1.15
COLCA1-205ENST00000620864 ICE2Q659A1 982 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 UNC5CLQ8IV45 518 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 NCOA1Q15788 1441 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 PLCB4Q15147 1175 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 SFMBT2Q5VUG0 894 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 DAPK3O43293 454 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 UFL1O94874 794 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 STX1BP61266 288 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 DGKZQ13574 1117 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 ARMC2Q8NEN0 867 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 PASKQ96RG2 1323 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 EFCAB14O75071 495 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 ALDH1L1O75891 902 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 MAGEA1P43355 309 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 EIF3BP55884 814 aaKnown RBP7.85□□□□□ -1.15
COLCA1-205ENST00000620864 ALS2CLQ60I27 953 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 Q6ZUG5 572 aa7.85□□□□□ -1.15
COLCA1-205ENST00000620864 CHD1O14646 1710 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 LOC102724159A0A0B4J2E5 919 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 APOA1P02647 267 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 PWP2Q15269 919 aaKnown RBP7.84□□□□□ -1.15
COLCA1-205ENST00000620864 BTN2A1Q7KYR7 527 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 IFIH1Q9BYX4 1025 aaKnown RBP7.84□□□□□ -1.15
COLCA1-205ENST00000620864 HAUS4Q9H6D7 363 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 NPATQ14207 1427 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 ANXA1P04083 346 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 CCDC159P0C7I6 412 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 TRIM27P14373 513 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 HS6ST3Q8IZP7 471 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 TRIM56Q9BRZ2 755 aaKnown RBP7.84□□□□□ -1.15
COLCA1-205ENST00000620864 VPS37BQ9H9H4 285 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 TRAF5O00463 557 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 SMARCA5O60264 1052 aaPredicted RBP7.84□□□□□ -1.15
COLCA1-205ENST00000620864 CDC25BP30305 580 aa7.84□□□□□ -1.15
COLCA1-205ENST00000620864 ANKRD35Q8N283 1001 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms