RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ABCA3Q99758 1704 aa22.01■■□□□ 1.11
PDLIM3-212ENST00000620787 CACNA1SQ13698 1873 aa22.01■■□□□ 1.11
PDLIM3-212ENST00000620787 TRIM49BA6NDI0 452 aa22.01■■□□□ 1.11
PDLIM3-212ENST00000620787 ERVV-1B6SEH8 477 aa22.01■■□□□ 1.11
PDLIM3-212ENST00000620787 ZNF507Q8TCN5 953 aa22.01■■□□□ 1.11
PDLIM3-212ENST00000620787 CYP2D7A0A087X1C5 515 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 MAGEB6P1A0A0J9YX57 407 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 A0A1W2PQC6 194 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 ADAMTS3O15072 1205 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 SRGAP2O75044 1071 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 CALM1P0DP23 149 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 CALM2P0DP24 149 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 CALM3P0DP25 149 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 MCM7P33993 719 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 TRAPPC10P48553 1259 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 ADSSL1Q8N142 457 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 CAPN11Q9UMQ6 739 aa22■■□□□ 1.11
PDLIM3-212ENST00000620787 LUC7L2Q9Y383 392 aaKnown RBP22■■□□□ 1.11
PDLIM3-212ENST00000620787 TARSL2A2RTX5 802 aaKnown RBP21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 MCM3P25205 808 aa21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 MAP9Q49MG5 647 aa21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 CCDC122Q5T0U0 273 aa21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 ZNF662Q6ZS27 426 aa21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 SRBD1Q8N5C6 995 aaKnown RBP21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 A0A1B0GUL6 1792 aa21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 PDS5AQ29RF7 1337 aaKnown RBP21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 DDAH1O94760 285 aa21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 TNNT3P45378 269 aaPredicted RBP21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 DZIP3Q86Y13 1208 aaKnown RBP21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 AFAP1L1Q8TED9 768 aa21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 RIOK1Q9BRS2 568 aaKnown RBP21.99■■□□□ 1.11
PDLIM3-212ENST00000620787 PMS1P54277 932 aaKnown RBP21.98■■□□□ 1.11
PDLIM3-212ENST00000620787 MEA1Q16626 185 aa21.98■■□□□ 1.11
PDLIM3-212ENST00000620787 IQCA1Q86XH1 822 aa21.98■■□□□ 1.11
PDLIM3-212ENST00000620787 COG1Q8WTW3 980 aa21.98■■□□□ 1.11
PDLIM3-212ENST00000620787 RREB1Q92766 1687 aa21.98■■□□□ 1.11
PDLIM3-212ENST00000620787 C4orf32Q8N8J7 132 aa21.97■■□□□ 1.11
PDLIM3-212ENST00000620787 RPGRIP1Q96KN7 1286 aa21.97■■□□□ 1.11
PDLIM3-212ENST00000620787 CAPZA3Q96KX2 299 aa21.97■■□□□ 1.11
PDLIM3-212ENST00000620787 IQSEC3Q9UPP2 1182 aaPredicted RBP21.97■■□□□ 1.11
PDLIM3-212ENST00000620787 PHLPP1O60346 1717 aa21.97■■□□□ 1.11
PDLIM3-212ENST00000620787 FGRP09769 529 aa21.97■■□□□ 1.11
PDLIM3-212ENST00000620787 EEF1GP26641 437 aaKnown RBP21.97■■□□□ 1.11
PDLIM3-212ENST00000620787 LONP1P36776 959 aaKnown RBP21.97■■□□□ 1.11
PDLIM3-212ENST00000620787 SUSD4Q5VX71 490 aa21.97■■□□□ 1.11
PDLIM3-212ENST00000620787 ARL6IP4Q66PJ3 421 aaKnown RBP21.97■■□□□ 1.11
PDLIM3-212ENST00000620787 EIF3CLB5ME19 914 aaKnown RBP21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 SCG2P13521 617 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 STAT6P42226 847 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 MAGEA9P43362 315 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 NLRP5P59047 1200 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 CKAP4Q07065 602 aaKnown RBP21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 GOLGA6L1Q8N7Z2 621 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 JAKMIP2Q96AA8 810 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 EIF3CQ99613 913 aaKnown RBP21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 THAP9Q9H5L6 903 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 EFCC1Q9HA90 598 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 RCCD1A6NED2 376 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 VEGFAP15692 232 aaPredicted RBP21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 NOP2P46087 812 aaKnown RBP21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 KRT83P78385 493 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 EHBP1Q8NDI1 1231 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 TTYH3Q9C0H2 523 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 ABCF2Q9UG63 623 aa21.96■■□□□ 1.11
PDLIM3-212ENST00000620787 MYH1P12882 1939 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 DYNLL1P63167 89 aaKnown RBP21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 STIM1Q13586 685 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 NAALADL2Q58DX5 795 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 KIAA1328Q86T90 577 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 BRIP1Q9BX63 1249 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 LACRTQ9GZZ8 138 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 GNL3LQ9NVN8 582 aaKnown RBP21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 COL1A1P02452 1464 aaPredicted RBP21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 KAT6BQ8WYB5 2073 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 KRT86O43790 486 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 PPFIA4O75335 1185 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 MYBL2P10244 700 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 CORO7P57737 925 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 TSR1Q2NL82 804 aaKnown RBP21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 RIN2Q8WYP3 895 aaPredicted RBP21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 DISC1Q9NRI5 854 aa21.95■■□□□ 1.1
PDLIM3-212ENST00000620787 COL4A1P02462 1669 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 LAMB1P07942 1786 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 BCL9O00512 1426 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 PDE2AO00408 941 aaPredicted RBP21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 PES1O00541 588 aaKnown RBP21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 ZMYND10O75800 440 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 PFKFB3Q16875 520 aaPredicted RBP21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 BRINP3Q76B58 766 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 PLEKHA4Q9H4M7 779 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 LAMB2P55268 1798 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 KLRC4O43908 158 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 SRGNP10124 158 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 IL6STP40189 918 aaPredicted RBP21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 CHRNDQ07001 517 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 KCNB1Q14721 858 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 GSPT2Q8IYD1 628 aaKnown RBP21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 IPO4Q8TEX9 1081 aaKnown RBP21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 AGPAT5Q9NUQ2 364 aa21.94■■□□□ 1.1
PDLIM3-212ENST00000620787 RASSF10A6NK89 507 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 1124 ms