RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 CCDC178Q5BJE1 867 aa12.66□□□□□ -0.38
TARDBP-223ENST00000620632 FBXO46Q6PJ61 603 aaPredicted RBP12.66□□□□□ -0.38
TARDBP-223ENST00000620632 GPR142Q7Z601 462 aa12.66□□□□□ -0.38
TARDBP-223ENST00000620632 MB21D1Q8N884 522 aa12.66□□□□□ -0.38
TARDBP-223ENST00000620632 PRPF38AQ8NAV1 312 aaKnown RBP12.66□□□□□ -0.38
TARDBP-223ENST00000620632 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
TARDBP-223ENST00000620632 KAT14Q9H8E8 782 aa12.66□□□□□ -0.38
TARDBP-223ENST00000620632 SLC38A10Q9HBR0 1119 aa12.66□□□□□ -0.38
TARDBP-223ENST00000620632 SRRDQ9UH36 339 aa12.66□□□□□ -0.38
TARDBP-223ENST00000620632 GJD2Q9UKL4 321 aa12.66□□□□□ -0.38
TARDBP-223ENST00000620632 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
TARDBP-223ENST00000620632 ISY1Q9ULR0 285 aaKnown RBP12.66□□□□□ -0.38
TARDBP-223ENST00000620632 RIPK3Q9Y572 518 aa12.66□□□□□ -0.38
TARDBP-223ENST00000620632 ZNF536O15090 1300 aa12.65□□□□□ -0.38
TARDBP-223ENST00000620632 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
TARDBP-223ENST00000620632 ERCC3P19447 782 aa12.65□□□□□ -0.38
TARDBP-223ENST00000620632 MCM5P33992 734 aa12.65□□□□□ -0.38
TARDBP-223ENST00000620632 EXOSC10Q01780 885 aaKnown RBP12.65□□□□□ -0.38
TARDBP-223ENST00000620632 PLS1Q14651 629 aa12.65□□□□□ -0.38
TARDBP-223ENST00000620632 WTAPQ15007 396 aa12.65□□□□□ -0.38
TARDBP-223ENST00000620632 PKN2Q16513 984 aaKnown RBP12.65□□□□□ -0.38
TARDBP-223ENST00000620632 SLC35G1Q2M3R5 365 aa12.65□□□□□ -0.38
TARDBP-223ENST00000620632 TMEM67Q5HYA8 995 aa12.65□□□□□ -0.38
TARDBP-223ENST00000620632 BTNL9Q6UXG8 535 aa12.65□□□□□ -0.38
TARDBP-223ENST00000620632 FAM160B2Q86V87 743 aa12.65□□□□□ -0.38
TARDBP-223ENST00000620632 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
TARDBP-223ENST00000620632 RAVER2Q9HCJ3 691 aaKnown RBP12.65□□□□□ -0.38
TARDBP-223ENST00000620632 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
TARDBP-223ENST00000620632 GNRH1P01148 92 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 ZKSCAN1P17029 563 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-223ENST00000620632 MAPK4P31152 587 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 FLT3LGP49771 235 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 TROAPQ12815 778 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 IKQ13123 557 aaPredicted RBP12.64□□□□□ -0.39
TARDBP-223ENST00000620632 MORN1Q5T089 497 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 SYDE2Q5VT97 1194 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 CPXCR1Q8N123 301 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 CHURC1Q8WUH1 139 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 USP6NLQ92738 828 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 ABHD8Q96I13 439 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 JAKMIP1Q96N16 626 aaKnown RBP12.64□□□□□ -0.39
TARDBP-223ENST00000620632 MYL10Q9BUA6 226 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 UBA5Q9GZZ9 404 aa12.64□□□□□ -0.39
TARDBP-223ENST00000620632 RBBP6Q7Z6E9 1792 aaKnown RBP12.64□□□□□ -0.39
TARDBP-223ENST00000620632 MCM3APO60318 1980 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 ERICH2A1L162 156 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 ATP2A1O14983 1001 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 STAT3P40763 770 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 CCNA1P78396 465 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 KRT32Q14532 448 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 GRM4Q14833 912 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 SART3Q15020 963 aaKnown RBP12.63□□□□□ -0.39
TARDBP-223ENST00000620632 ARHGEF6Q15052 776 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 WDR78Q5VTH9 848 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 SNRNP48Q6IEG0 339 aaKnown RBP12.63□□□□□ -0.39
TARDBP-223ENST00000620632 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
TARDBP-223ENST00000620632 PLEKHH3Q7Z736 793 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 NCAPG2Q86XI2 1143 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 RAB11FIP4Q86YS3 637 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 RIOX2Q8IUF8 465 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 SHCBP1Q8NEM2 672 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 SH3TC2Q8TF17 1288 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 COA7Q96BR5 231 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 TMEM87BQ96K49 555 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 AGBL1Q96MI9 1066 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 MTA3Q9BTC8 594 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
TARDBP-223ENST00000620632 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
TARDBP-223ENST00000620632 WDR19Q8NEZ3 1342 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
TARDBP-223ENST00000620632 ZBED4O75132 1171 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 PARP1P09874 1014 aaKnown RBP12.62□□□□□ -0.39
TARDBP-223ENST00000620632 ELNP15502 786 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 RXRAP19793 462 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 PTPREP23469 700 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 HOXD10P28358 340 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 LIFRP42702 1097 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 PRMT2P55345 433 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 GRB14Q14449 540 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 ASPRV1Q53RT3 343 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 GPATCH4Q5T3I0 446 aaKnown RBP12.62□□□□□ -0.39
TARDBP-223ENST00000620632 CCDC174Q6PII3 467 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 NBPF11Q86T75 865 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 ZNF654Q8IZM8 581 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 TEX13BQ9BXU2 312 aa12.62□□□□□ -0.39
TARDBP-223ENST00000620632 CYTH3O43739 400 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 CASTP20810 708 aaKnown RBP12.61□□□□□ -0.39
TARDBP-223ENST00000620632 CYP2B6P20813 491 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 SLC4A3P48751 1232 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 OAZ1P54368 228 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 IRF5Q13568 498 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 CCL14Q16627 93 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 SGMS1Q86VZ5 419 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 CCAR1Q8IX12 1150 aaKnown RBP12.61□□□□□ -0.39
TARDBP-223ENST00000620632 ADGRF4Q8IZF3 695 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 NPLOC4Q8TAT6 608 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 RAET1EQ8TD07 263 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 NUDT12Q9BQG2 462 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 BRPF3Q9ULD4 1205 aa12.61□□□□□ -0.39
TARDBP-223ENST00000620632 FRMPD3Q5JV73 1810 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms