RNA–Protein interactions for RNA: ENST00000620410.1

PTPRT-212, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5 BASIC

Gene PTPRT, Length 940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-212ENST00000620410 PPM1EQ8WY54 764 aa13.65□□□□□ -0.22
PTPRT-212ENST00000620410 ASB2Q96Q27 587 aa13.65□□□□□ -0.22
PTPRT-212ENST00000620410 GAS2L1Q99501 681 aaPredicted RBP13.65□□□□□ -0.22
PTPRT-212ENST00000620410 ARHGEF10LQ9HCE6 1279 aa13.65□□□□□ -0.22
PTPRT-212ENST00000620410 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
PTPRT-212ENST00000620410 PARP14Q460N5 1801 aa13.64□□□□□ -0.23
PTPRT-212ENST00000620410 GREB1LQ9C091 1923 aaPredicted RBP13.64□□□□□ -0.23
PTPRT-212ENST00000620410 IGKV6D-41A0A0C4DH26 115 aa13.64□□□□□ -0.23
PTPRT-212ENST00000620410 PATL2C9JE40 543 aaKnown RBP13.64□□□□□ -0.23
PTPRT-212ENST00000620410 FOXP2O15409 715 aa13.64□□□□□ -0.23
PTPRT-212ENST00000620410 FLOT1O75955 427 aa13.64□□□□□ -0.23
PTPRT-212ENST00000620410 ZFYP08048 801 aaPredicted RBP13.64□□□□□ -0.23
PTPRT-212ENST00000620410 PRAMEF19Q5SWL8 479 aa13.64□□□□□ -0.23
PTPRT-212ENST00000620410 AKNAD1Q5T1N1 836 aa13.64□□□□□ -0.23
PTPRT-212ENST00000620410 IFNL3Q8IZI9 196 aa13.64□□□□□ -0.23
PTPRT-212ENST00000620410 SHCBP1Q8NEM2 672 aa13.64□□□□□ -0.23
PTPRT-212ENST00000620410 GPATCH3Q96I76 525 aa13.64□□□□□ -0.23
PTPRT-212ENST00000620410 UHRF1Q96T88 793 aaPredicted RBP13.64□□□□□ -0.23
PTPRT-212ENST00000620410 XPNPEP3Q9NQH7 507 aa13.64□□□□□ -0.23
PTPRT-212ENST00000620410 ARPP21Q9UBL0 812 aaPredicted RBP13.64□□□□□ -0.23
PTPRT-212ENST00000620410 SMCHD1A6NHR9 2005 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 ROBO3Q96MS0 1386 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 WDR46O15213 610 aaKnown RBP13.63□□□□□ -0.23
PTPRT-212ENST00000620410 PRDM1O75626 825 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 RARBP10826 455 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 MRPS5P82675 430 aaKnown RBP13.63□□□□□ -0.23
PTPRT-212ENST00000620410 ZMYM1Q5SVZ6 1142 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 FAM83BQ5T0W9 1011 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
PTPRT-212ENST00000620410 AMOTL1Q8IY63 956 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 IL27Q8NEV9 243 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 REPS2Q8NFH8 660 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 NUP88Q99567 741 aaPredicted RBP13.63□□□□□ -0.23
PTPRT-212ENST00000620410 INCENPQ9NQS7 918 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 TMEM39AQ9NV64 488 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 PLXNA1Q9UIW2 1896 aa13.63□□□□□ -0.23
PTPRT-212ENST00000620410 A0A1W2PQ45 241 aaPredicted RBP13.62□□□□□ -0.23
PTPRT-212ENST00000620410 A0A1W2PQY0 241 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 MX1P20591 662 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 PLS1Q14651 629 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 ANKRD45Q5TZF3 282 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 RNF180Q86T96 592 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 ABRAQ8N0Z2 381 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 MB21D1Q8N884 522 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 MAML3Q96JK9 1138 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 PRDM12Q9H4Q4 367 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 SH2D4AQ9H788 454 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 MKNK2Q9HBH9 465 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 NYAP2Q9P242 653 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 CHD7Q9P2D1 2997 aa13.62□□□□□ -0.23
PTPRT-212ENST00000620410 F5H6K3 240 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 VWA5AO00534 786 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 PGK1P00558 417 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 APPP05067 770 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 GNAT2P19087 354 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 KLRC3Q07444 240 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 NCAPG2Q86XI2 1143 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 MKL1Q969V6 931 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 TOX2Q96NM4 488 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 MROH8Q9H579 483 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 CLIP2Q9UDT6 1046 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 NRBP1Q9UHY1 535 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 ZNF214Q9UL59 606 aaPredicted RBP13.61□□□□□ -0.23
PTPRT-212ENST00000620410 PPP1R9AQ9ULJ8 1098 aa13.61□□□□□ -0.23
PTPRT-212ENST00000620410 COL11A1P12107 1806 aaPredicted RBP13.61□□□□□ -0.23
PTPRT-212ENST00000620410 ZNFX1Q9P2E3 1918 aaKnown RBP13.6□□□□□ -0.23
PTPRT-212ENST00000620410 XIRP2A4UGR9 3374 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 REV3LO60673 3130 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 DCDC2CA8MYV0 355 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 ERC2O15083 957 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 NDUFB10O96000 172 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
PTPRT-212ENST00000620410 TDO2P48775 406 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 FAAP100Q0VG06 881 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 HDAC1Q13547 482 aaPredicted RBP13.6□□□□□ -0.23
PTPRT-212ENST00000620410 CCDC174Q6PII3 467 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 ANKRD33Q7Z3H0 272 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 RIOX2Q8IUF8 465 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 CEP95Q96GE4 821 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
PTPRT-212ENST00000620410 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTPRT-212ENST00000620410 FSD1Q9BTV5 496 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 PBX4Q9BYU1 374 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 MTMR4Q9NYA4 1195 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 RIPK3Q9Y572 518 aa13.6□□□□□ -0.23
PTPRT-212ENST00000620410 RAD21O60216 631 aa13.59□□□□□ -0.23
PTPRT-212ENST00000620410 TIMP1P01033 207 aa13.59□□□□□ -0.23
PTPRT-212ENST00000620410 PGK2P07205 417 aa13.59□□□□□ -0.23
PTPRT-212ENST00000620410 FCER1AP12319 257 aa13.59□□□□□ -0.23
PTPRT-212ENST00000620410 PBX2P40425 430 aa13.59□□□□□ -0.23
PTPRT-212ENST00000620410 STAT3P40763 770 aa13.59□□□□□ -0.23
PTPRT-212ENST00000620410 PDE1AP54750 535 aa13.59□□□□□ -0.23
PTPRT-212ENST00000620410 PPIGQ13427 754 aaKnown RBP eCLIP13.59□□□□□ -0.23
PTPRT-212ENST00000620410 CCDC85BQ15834 202 aaPredicted RBP13.59□□□□□ -0.23
PTPRT-212ENST00000620410 VPS53Q5VIR6 699 aa13.59□□□□□ -0.23
PTPRT-212ENST00000620410 C1QTNF1Q9BXJ1 281 aa13.59□□□□□ -0.23
PTPRT-212ENST00000620410 GOPCQ9HD26 462 aa13.59□□□□□ -0.23
PTPRT-212ENST00000620410 GRXCR1A8MXD5 290 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms