RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 SMCHD1A6NHR9 2005 aa26.31■■□□□ 1.8
SRRT-218ENST00000620394 IGKV6D-41A0A0C4DH26 115 aa26.3■■□□□ 1.8
SRRT-218ENST00000620394 MINDY4BA8MYZ0 360 aa26.3■■□□□ 1.8
SRRT-218ENST00000620394 PATL2C9JE40 543 aaKnown RBP26.3■■□□□ 1.8
SRRT-218ENST00000620394 TDO2P48775 406 aa26.3■■□□□ 1.8
SRRT-218ENST00000620394 TMEM132BQ14DG7 1078 aa26.3■■□□□ 1.8
SRRT-218ENST00000620394 ZMYM1Q5SVZ6 1142 aa26.3■■□□□ 1.8
SRRT-218ENST00000620394 RNF180Q86T96 592 aa26.3■■□□□ 1.8
SRRT-218ENST00000620394 FSD1Q9BTV5 496 aa26.3■■□□□ 1.8
SRRT-218ENST00000620394 PPP1R9AQ9ULJ8 1098 aa26.3■■□□□ 1.8
SRRT-218ENST00000620394 HDAC1Q13547 482 aaPredicted RBP26.29■■□□□ 1.8
SRRT-218ENST00000620394 IFNL3Q8IZI9 196 aa26.29■■□□□ 1.8
SRRT-218ENST00000620394 SEC62Q99442 399 aaKnown RBP26.29■■□□□ 1.8
SRRT-218ENST00000620394 MKNK2Q9HBH9 465 aa26.29■■□□□ 1.8
SRRT-218ENST00000620394 FBXO28Q9NVF7 368 aa26.29■■□□□ 1.8
SRRT-218ENST00000620394 FAM83BQ5T0W9 1011 aa26.28■■□□□ 1.8
SRRT-218ENST00000620394 REPS2Q8NFH8 660 aa26.28■■□□□ 1.8
SRRT-218ENST00000620394 SYMPKQ92797 1274 aaKnown RBP26.28■■□□□ 1.8
SRRT-218ENST00000620394 MMP19Q99542 508 aa26.28■■□□□ 1.8
SRRT-218ENST00000620394 ZNF287Q9HBT7 754 aa26.28■■□□□ 1.8
SRRT-218ENST00000620394 SPTBN5Q9NRC6 3674 aaKnown RBP26.28■■□□□ 1.8
SRRT-218ENST00000620394 VWA5AO00534 786 aa26.27■■□□□ 1.8
SRRT-218ENST00000620394 KIAA0355O15063 1070 aa26.27■■□□□ 1.8
SRRT-218ENST00000620394 ITGB8P26012 769 aa26.27■■□□□ 1.8
SRRT-218ENST00000620394 RIOX2Q8IUF8 465 aa26.27■■□□□ 1.8
SRRT-218ENST00000620394 TINF2Q9BSI4 451 aa26.27■■□□□ 1.8
SRRT-218ENST00000620394 ZNF214Q9UL59 606 aaPredicted RBP26.27■■□□□ 1.8
SRRT-218ENST00000620394 SYNPO2Q9UMS6 1093 aa26.27■■□□□ 1.8
SRRT-218ENST00000620394 DIS3Q9Y2L1 958 aaKnown RBP26.27■■□□□ 1.8
SRRT-218ENST00000620394 A0A1W2PQ45 241 aaPredicted RBP26.26■■□□□ 1.79
SRRT-218ENST00000620394 A0A1W2PQY0 241 aa26.26■■□□□ 1.79
SRRT-218ENST00000620394 RAG1P15918 1043 aa26.26■■□□□ 1.79
SRRT-218ENST00000620394 FPGSQ05932 587 aa26.26■■□□□ 1.79
SRRT-218ENST00000620394 KCTD2Q14681 263 aa26.26■■□□□ 1.79
SRRT-218ENST00000620394 NACAP1Q9BZK3 213 aa26.26■■□□□ 1.79
SRRT-218ENST00000620394 PRDM6Q9NQX0 595 aa26.26■■□□□ 1.79
SRRT-218ENST00000620394 PQBP1O60828 265 aaKnown RBP26.25■■□□□ 1.79
SRRT-218ENST00000620394 PGK1P00558 417 aa26.25■■□□□ 1.79
SRRT-218ENST00000620394 APPP05067 770 aa26.25■■□□□ 1.79
SRRT-218ENST00000620394 AKR1A1P14550 325 aa26.25■■□□□ 1.79
SRRT-218ENST00000620394 COPB2P35606 906 aa26.25■■□□□ 1.79
SRRT-218ENST00000620394 SAMD1Q6SPF0 538 aaPredicted RBP26.25■■□□□ 1.79
SRRT-218ENST00000620394 STK11IPQ8N1F8 1099 aa26.25■■□□□ 1.79
SRRT-218ENST00000620394 FOXP2O15409 715 aa26.24■■□□□ 1.79
SRRT-218ENST00000620394 NDUFB10O96000 172 aa26.24■■□□□ 1.79
SRRT-218ENST00000620394 AAMPQ13685 434 aa26.24■■□□□ 1.79
SRRT-218ENST00000620394 MKL1Q969V6 931 aa26.24■■□□□ 1.79
SRRT-218ENST00000620394 SLF1Q9BQI6 1058 aa26.24■■□□□ 1.79
SRRT-218ENST00000620394 F5H6K3 240 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 PRDM1O75626 825 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 PGK2P07205 417 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 EPHB4P54760 987 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 KLRC3Q07444 240 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 ZNF792Q3KQV3 632 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 ANKRD45Q5TZF3 282 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 ZNF444Q8N0Y2 327 aaPredicted RBP26.23■■□□□ 1.79
SRRT-218ENST00000620394 CEP95Q96GE4 821 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 NUP88Q99567 741 aaPredicted RBP26.23■■□□□ 1.79
SRRT-218ENST00000620394 NAPBQ9H115 298 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 MTMR4Q9NYA4 1195 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 CNPY2Q9Y2B0 182 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 PRUNE2Q8WUY3 3088 aa26.23■■□□□ 1.79
SRRT-218ENST00000620394 STAT3P40763 770 aa26.22■■□□□ 1.79
SRRT-218ENST00000620394 PDE1AP54750 535 aa26.22■■□□□ 1.79
SRRT-218ENST00000620394 PPARAQ07869 468 aa26.22■■□□□ 1.79
SRRT-218ENST00000620394 ANKRD33Q7Z3H0 272 aa26.22■■□□□ 1.79
SRRT-218ENST00000620394 TOX2Q96NM4 488 aa26.22■■□□□ 1.79
SRRT-218ENST00000620394 TSEN34Q9BSV6 310 aaKnown RBP26.22■■□□□ 1.79
SRRT-218ENST00000620394 TMEM39AQ9NV64 488 aa26.22■■□□□ 1.79
SRRT-218ENST00000620394 ZBTB47Q9UFB7 747 aaPredicted RBP26.22■■□□□ 1.79
SRRT-218ENST00000620394 RAD21O60216 631 aa26.21■■□□□ 1.79
SRRT-218ENST00000620394 ADAMTS4O75173 837 aa26.21■■□□□ 1.79
SRRT-218ENST00000620394 ZNF865P0CJ78 1059 aaPredicted RBP26.21■■□□□ 1.79
SRRT-218ENST00000620394 DNAJB2P25686 324 aa26.21■■□□□ 1.79
SRRT-218ENST00000620394 PDE4BQ07343 736 aa26.21■■□□□ 1.79
SRRT-218ENST00000620394 GMCL1P1Q8NEA9 526 aa26.21■■□□□ 1.79
SRRT-218ENST00000620394 NEDD1Q8NHV4 660 aa26.21■■□□□ 1.79
SRRT-218ENST00000620394 EVI5LQ96CN4 794 aa26.21■■□□□ 1.79
SRRT-218ENST00000620394 STARD7Q9NQZ5 370 aa26.21■■□□□ 1.79
SRRT-218ENST00000620394 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.2■■□□□ 1.78
SRRT-218ENST00000620394 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.2■■□□□ 1.78
SRRT-218ENST00000620394 TTLL1O95922 423 aa26.2■■□□□ 1.78
SRRT-218ENST00000620394 TAL1P17542 331 aaPredicted RBP26.2■■□□□ 1.78
SRRT-218ENST00000620394 TICAM2Q86XR7 235 aa26.2■■□□□ 1.78
SRRT-218ENST00000620394 MSL3Q8N5Y2 521 aaKnown RBP26.2■■□□□ 1.78
SRRT-218ENST00000620394 NUP133Q8WUM0 1156 aa26.2■■□□□ 1.78
SRRT-218ENST00000620394 TEX13BQ9BXU2 312 aa26.2■■□□□ 1.78
SRRT-218ENST00000620394 CLIP2Q9UDT6 1046 aa26.2■■□□□ 1.78
SRRT-218ENST00000620394 SYNRGQ9UMZ2 1314 aa26.19■■□□□ 1.78
SRRT-218ENST00000620394 MOXD2PA6NHM9 499 aa26.19■■□□□ 1.78
SRRT-218ENST00000620394 DCDC2CA8MYV0 355 aa26.19■■□□□ 1.78
SRRT-218ENST00000620394 ATP2A1O14983 1001 aa26.19■■□□□ 1.78
SRRT-218ENST00000620394 SLC3A2P08195 630 aaKnown RBP26.19■■□□□ 1.78
SRRT-218ENST00000620394 CCDC129Q6ZRS4 1044 aa26.19■■□□□ 1.78
SRRT-218ENST00000620394 PRPF38AQ8NAV1 312 aaKnown RBP26.19■■□□□ 1.78
SRRT-218ENST00000620394 LENG1Q96BZ8 264 aaPredicted RBP26.19■■□□□ 1.78
SRRT-218ENST00000620394 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.19■■□□□ 1.78
SRRT-218ENST00000620394 TSPY3P0CV98 308 aa26.18■■□□□ 1.78
SRRT-218ENST00000620394 TSPY8P0CW00 308 aa26.18■■□□□ 1.78
SRRT-218ENST00000620394 FAAP100Q0VG06 881 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms