RNA–Protein interactions for RNA: ENST00000619408.1

TVP23A-211, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-211ENST00000619408 SYAP1Q96A49 352 aaPredicted RBP8.77□□□□□ -1.01
TVP23A-211ENST00000619408 RRP36Q96EU6 259 aaKnown RBP8.77□□□□□ -1.01
TVP23A-211ENST00000619408 CHAMP1Q96JM3 812 aa8.77□□□□□ -1.01
TVP23A-211ENST00000619408 MYCBPQ99417 103 aaPredicted RBP8.77□□□□□ -1.01
TVP23A-211ENST00000619408 DEFB129Q9H1M3 183 aa8.77□□□□□ -1.01
TVP23A-211ENST00000619408 SH2D4AQ9H788 454 aa8.77□□□□□ -1.01
TVP23A-211ENST00000619408 ADARB2Q9NS39 739 aaKnown RBP8.77□□□□□ -1.01
TVP23A-211ENST00000619408 LMBRD1Q9NUN5 540 aa8.77□□□□□ -1.01
TVP23A-211ENST00000619408 PCDH10Q9P2E7 1040 aa8.77□□□□□ -1.01
TVP23A-211ENST00000619408 ZBTB21Q9ULJ3 1066 aa8.77□□□□□ -1.01
TVP23A-211ENST00000619408 DDX49Q9Y6V7 483 aaKnown RBP8.77□□□□□ -1.01
TVP23A-211ENST00000619408 FRMPD2Q68DX3 1309 aaPredicted RBP8.77□□□□□ -1.01
TVP23A-211ENST00000619408 PITPNM2Q9BZ72 1349 aa8.77□□□□□ -1.01
TVP23A-211ENST00000619408 USP17L5A8MUK1 530 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 UBE2Q2LH0YL09 131 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 CTIFO43310 598 aaKnown RBP8.76□□□□□ -1.01
TVP23A-211ENST00000619408 ASNSP08243 561 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 GOLGA8HP0CJ92 632 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 SNHG28P0DPA3 235 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 CALML3P27482 149 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 KRT2P35908 639 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 CAP2P40123 477 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 EPS15P42566 896 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 TNNT3P45378 269 aaPredicted RBP8.76□□□□□ -1.01
TVP23A-211ENST00000619408 PSEN1P49768 467 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 ZNF543Q08ER8 600 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 PKN1Q16512 942 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 NBPF20Q3BBV1 942 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 FAM173BQ6P4H8 233 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 MIGA2Q7L4E1 593 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 CDAN1Q8IWY9 1227 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 DIS3L2Q8IYB7 885 aaKnown RBP8.76□□□□□ -1.01
TVP23A-211ENST00000619408 FAM177A1Q8N128 213 aaPredicted RBP8.76□□□□□ -1.01
TVP23A-211ENST00000619408 GMCL1P1Q8NEA9 526 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 CCDC12Q8WUD4 166 aaPredicted RBP8.76□□□□□ -1.01
TVP23A-211ENST00000619408 MKL1Q969V6 931 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 SPATA32Q96LK8 384 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 TACO1Q9BSH4 297 aaKnown RBP8.76□□□□□ -1.01
TVP23A-211ENST00000619408 FOXP1Q9H334 677 aaPredicted RBP8.76□□□□□ -1.01
TVP23A-211ENST00000619408 GDPD2Q9HCC8 539 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 GOPCQ9HD26 462 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 SH3GLB2Q9NR46 395 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 GJB4Q9NTQ9 266 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 GINM1Q9NU53 330 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 VPS54Q9P1Q0 977 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 MORC2Q9Y6X9 1032 aaPredicted RBP8.76□□□□□ -1.01
TVP23A-211ENST00000619408 ASTN2O75129 1339 aaPredicted RBP8.76□□□□□ -1.01
TVP23A-211ENST00000619408 ELP1O95163 1332 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 MYH15Q9Y2K3 1946 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 MYH4Q9Y623 1939 aa8.76□□□□□ -1.01
TVP23A-211ENST00000619408 hCG_1642624A0A1W2PR95 340 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 GOLGA6L4A6NEF3 574 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 hCG_1984214I3L0E3 225 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 U2AF2P26368 475 aaKnown RBP eCLIP8.75□□□□□ -1.01
TVP23A-211ENST00000619408 SLC1A4P43007 532 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 NLRP5P59047 1200 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 C1QTNF8P60827 252 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 UBE2HP62256 183 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 MAP3K10Q02779 954 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 SHROOM1Q2M3G4 852 aaPredicted RBP8.75□□□□□ -1.01
TVP23A-211ENST00000619408 MYSM1Q5VVJ2 828 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 SLFN13Q68D06 897 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 RASGRP2Q7LDG7 609 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 HEATR3Q7Z4Q2 680 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 USP48Q86UV5 1035 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 NOSTRINQ8IVI9 506 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 KRT222Q8N1A0 295 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 ZNF713Q8N859 430 aaPredicted RBP8.75□□□□□ -1.01
TVP23A-211ENST00000619408 DCPSQ96C86 337 aaKnown RBP8.75□□□□□ -1.01
TVP23A-211ENST00000619408 TEPSINQ96N21 525 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 NCAPGQ9BPX3 1015 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 PHF20Q9BVI0 1012 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 ZNF341Q9BYN7 854 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 GPCPD1Q9NPB8 672 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 PRDM10Q9NQV6 1147 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 CWC15Q9P013 229 aaKnown RBP8.75□□□□□ -1.01
TVP23A-211ENST00000619408 PGAP2Q9UHJ9 254 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 KCNJ14Q9UNX9 436 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 MYH6P13533 1939 aa8.75□□□□□ -1.01
TVP23A-211ENST00000619408 KIF28PB7ZC32 967 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 CYTH3O43739 400 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 CTNND1O60716 968 aaKnown RBP8.74□□□□□ -1.01
TVP23A-211ENST00000619408 NDUFB10O96000 172 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 CBX1P83916 185 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 SETQ01105 290 aaPredicted RBP8.74□□□□□ -1.01
TVP23A-211ENST00000619408 IKQ13123 557 aaPredicted RBP8.74□□□□□ -1.01
TVP23A-211ENST00000619408 RRP1BQ14684 758 aaKnown RBP8.74□□□□□ -1.01
TVP23A-211ENST00000619408 SUPT20HL1Q3ZLR7 823 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 NOM1Q5C9Z4 860 aaKnown RBP8.74□□□□□ -1.01
TVP23A-211ENST00000619408 MUM1L1Q5H9M0 696 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 GALNT17Q6IS24 598 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 KCTD1Q719H9 257 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 HOMER1Q86YM7 354 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 SULF1Q8IWU6 871 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 LEO1Q8WVC0 666 aaPredicted RBP8.74□□□□□ -1.01
TVP23A-211ENST00000619408 GPKOWQ92917 476 aaPredicted RBP eCLIP8.74□□□□□ -1.01
TVP23A-211ENST00000619408 GMCL1Q96IK5 515 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 L3MBTL3Q96JM7 780 aaPredicted RBP8.74□□□□□ -1.01
TVP23A-211ENST00000619408 RIOX1Q9H6W3 641 aa8.74□□□□□ -1.01
TVP23A-211ENST00000619408 BARHL2Q9NY43 387 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms