RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 KANK3Q6NY19 840 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 PLA2G4DQ86XP0 818 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 GMLQ99445 158 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 GPCPD1Q9NPB8 672 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 VWA3AA6NCI4 1184 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 hCG_1984214I3L0E3 225 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 ZNF75DP51815 510 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 SARM1Q6SZW1 724 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 CCDC125Q86Z20 511 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 AOPEPQ8N6M6 819 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 PDILTQ8N807 584 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 ZNF713Q8N859 430 aaPredicted RBP21.71■■□□□ 1.07
PSPC1-206ENST00000619300 C4orf32Q8N8J7 132 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 MKL1Q969V6 931 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 KANSL2Q9H9L4 492 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 PIM2Q9P1W9 311 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 PCDHA5Q9Y5H7 936 aa21.71■■□□□ 1.07
PSPC1-206ENST00000619300 ACTN4O43707 911 aaKnown RBP21.7■■□□□ 1.06
PSPC1-206ENST00000619300 GPATCH4Q5T3I0 446 aaKnown RBP21.7■■□□□ 1.06
PSPC1-206ENST00000619300 ARL6IP4Q66PJ3 421 aaKnown RBP21.7■■□□□ 1.06
PSPC1-206ENST00000619300 SYMPKQ92797 1274 aaKnown RBP21.7■■□□□ 1.06
PSPC1-206ENST00000619300 HDAC9Q9UKV0 1011 aa21.7■■□□□ 1.06
PSPC1-206ENST00000619300 ATRNL1Q5VV63 1379 aa21.7■■□□□ 1.06
PSPC1-206ENST00000619300 FOXN1O15353 648 aa21.7■■□□□ 1.06
PSPC1-206ENST00000619300 ZBTB7AO95365 584 aa21.7■■□□□ 1.06
PSPC1-206ENST00000619300 POSTNQ15063 836 aa21.7■■□□□ 1.06
PSPC1-206ENST00000619300 ISM2Q6H9L7 571 aa21.7■■□□□ 1.06
PSPC1-206ENST00000619300 NYAP2Q9P242 653 aa21.7■■□□□ 1.06
PSPC1-206ENST00000619300 ESYT2A0FGR8 921 aa21.69■■□□□ 1.06
PSPC1-206ENST00000619300 SPDYE2BA6NHP3 402 aa21.69■■□□□ 1.06
PSPC1-206ENST00000619300 SPDYE6P0CI01 402 aa21.69■■□□□ 1.06
PSPC1-206ENST00000619300 INF2Q27J81 1249 aa21.69■■□□□ 1.06
PSPC1-206ENST00000619300 KRT25Q7Z3Z0 450 aa21.69■■□□□ 1.06
PSPC1-206ENST00000619300 OGFOD1Q8N543 542 aa21.69■■□□□ 1.06
PSPC1-206ENST00000619300 ZNRF3Q9ULT6 936 aa21.69■■□□□ 1.06
PSPC1-206ENST00000619300 MYH8P13535 1937 aa21.69■■□□□ 1.06
PSPC1-206ENST00000619300 EEF2P13639 858 aaKnown RBP21.68■■□□□ 1.06
PSPC1-206ENST00000619300 IL17AQ16552 155 aa21.68■■□□□ 1.06
PSPC1-206ENST00000619300 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.68■■□□□ 1.06
PSPC1-206ENST00000619300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.68■■□□□ 1.06
PSPC1-206ENST00000619300 GOLGA6L6A8MZA4 724 aa21.68■■□□□ 1.06
PSPC1-206ENST00000619300 DLGAP5Q15398 846 aa21.68■■□□□ 1.06
PSPC1-206ENST00000619300 NT5DC1Q5TFE4 455 aa21.68■■□□□ 1.06
PSPC1-206ENST00000619300 NIM1KQ8IY84 436 aa21.68■■□□□ 1.06
PSPC1-206ENST00000619300 ADGRF4Q8IZF3 695 aa21.68■■□□□ 1.06
PSPC1-206ENST00000619300 SPC24Q8NBT2 197 aa21.68■■□□□ 1.06
PSPC1-206ENST00000619300 CCDC34Q96HJ3 373 aa21.68■■□□□ 1.06
PSPC1-206ENST00000619300 JMJD4Q9H9V9 463 aa21.68■■□□□ 1.06
PSPC1-206ENST00000619300 TMOD2Q9NZR1 351 aa21.68■■□□□ 1.06
PSPC1-206ENST00000619300 GREB1LQ9C091 1923 aaPredicted RBP21.67■■□□□ 1.06
PSPC1-206ENST00000619300 A0A087X0B3 334 aa21.67■■□□□ 1.06
PSPC1-206ENST00000619300 SLFN14P0C7P3 912 aa21.67■■□□□ 1.06
PSPC1-206ENST00000619300 CCDC96Q2M329 555 aa21.67■■□□□ 1.06
PSPC1-206ENST00000619300 SHROOM1Q2M3G4 852 aaPredicted RBP21.67■■□□□ 1.06
PSPC1-206ENST00000619300 TTBK2Q6IQ55 1244 aa21.67■■□□□ 1.06
PSPC1-206ENST00000619300 TMEM179Q6ZVK1 233 aa21.67■■□□□ 1.06
PSPC1-206ENST00000619300 DHX58Q96C10 678 aa21.67■■□□□ 1.06
PSPC1-206ENST00000619300 ATF5Q9Y2D1 282 aaPredicted RBP21.67■■□□□ 1.06
PSPC1-206ENST00000619300 ZBTB12Q9Y330 459 aaPredicted RBP21.67■■□□□ 1.06
PSPC1-206ENST00000619300 COL2A1P02458 1487 aaPredicted RBP21.67■■□□□ 1.06
PSPC1-206ENST00000619300 PNMA6FA0A0J9YX94 578 aa21.67■■□□□ 1.06
PSPC1-206ENST00000619300 SMTNL1A8MU46 457 aa21.67■■□□□ 1.06
PSPC1-206ENST00000619300 TPM3P06753 285 aa21.67■■□□□ 1.06
PSPC1-206ENST00000619300 SARSP49591 514 aaKnown RBP21.67■■□□□ 1.06
PSPC1-206ENST00000619300 ABCB5Q2M3G0 1257 aa21.67■■□□□ 1.06
PSPC1-206ENST00000619300 SIPA1L1O43166 1804 aa21.66■■□□□ 1.06
PSPC1-206ENST00000619300 POLD1P28340 1107 aa21.66■■□□□ 1.06
PSPC1-206ENST00000619300 SEPT2Q15019 361 aa21.66■■□□□ 1.06
PSPC1-206ENST00000619300 NONOQ15233 471 aaKnown RBP eCLIP21.66■■□□□ 1.06
PSPC1-206ENST00000619300 SIAH1Q8IUQ4 282 aa21.66■■□□□ 1.06
PSPC1-206ENST00000619300 CSRNP1Q96S65 589 aa21.66■■□□□ 1.06
PSPC1-206ENST00000619300 ZNF70Q9UC06 446 aaPredicted RBP21.66■■□□□ 1.06
PSPC1-206ENST00000619300 COL4A5P29400 1685 aa21.66■■□□□ 1.06
PSPC1-206ENST00000619300 ZNF500O60304 480 aaPredicted RBP21.65■■□□□ 1.06
PSPC1-206ENST00000619300 PRR29P0C7W0 189 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 LONP1P36776 959 aaKnown RBP21.65■■□□□ 1.06
PSPC1-206ENST00000619300 DALRD3Q5D0E6 543 aaKnown RBP21.65■■□□□ 1.06
PSPC1-206ENST00000619300 KCTD1Q719H9 257 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 SMARCE1Q969G3 411 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 COA7Q96BR5 231 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 ZNF830Q96NB3 372 aaPredicted RBP21.65■■□□□ 1.06
PSPC1-206ENST00000619300 TCP10L2B9ZVM9 353 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 LAD1O00515 517 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 IKBKBO14920 756 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 CDC25BP30305 580 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 ICA1Q05084 483 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 DRC7Q8IY82 874 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 GRAMD1CQ8IYS0 662 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 REXO1Q8N1G1 1221 aaKnown RBP21.65■■□□□ 1.06
PSPC1-206ENST00000619300 AGBL3Q8NEM8 1001 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 DCAF4Q8WV16 495 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 PYM1Q9BRP8 204 aaKnown RBP21.65■■□□□ 1.06
PSPC1-206ENST00000619300 MTFR1LQ9H019 292 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 MAN1B1Q9UKM7 699 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 KIF13BQ9NQT8 1826 aa21.65■■□□□ 1.06
PSPC1-206ENST00000619300 PSME4Q14997 1843 aa21.64■■□□□ 1.06
PSPC1-206ENST00000619300 CLRN2A0PK11 232 aa21.64■■□□□ 1.05
PSPC1-206ENST00000619300 GDF11O95390 407 aa21.64■■□□□ 1.05
PSPC1-206ENST00000619300 SLC16A2P36021 539 aa21.64■■□□□ 1.05
PSPC1-206ENST00000619300 NCAPHQ15003 741 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms