RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SYCP1Q15431 976 aa13.71□□□□□ -0.21
SRRT-216ENST00000618262 ZYXQ15942 572 aaKnown RBP13.71□□□□□ -0.21
SRRT-216ENST00000618262 BLOC1S2Q6QNY1 142 aa13.71□□□□□ -0.21
SRRT-216ENST00000618262 HSCBQ8IWL3 235 aa13.71□□□□□ -0.21
SRRT-216ENST00000618262 TSPY2A6NKD2 308 aa13.71□□□□□ -0.21
SRRT-216ENST00000618262 FKBP1AP62942 108 aaKnown RBP13.71□□□□□ -0.21
SRRT-216ENST00000618262 TTLL12Q14166 644 aaPredicted RBP13.71□□□□□ -0.21
SRRT-216ENST00000618262 AKNAD1Q5T1N1 836 aa13.71□□□□□ -0.21
SRRT-216ENST00000618262 TAX1BP1Q86VP1 789 aa13.71□□□□□ -0.21
SRRT-216ENST00000618262 AMOTL1Q8IY63 956 aa13.71□□□□□ -0.21
SRRT-216ENST00000618262 RPUSD2Q8IZ73 545 aaKnown RBP13.71□□□□□ -0.21
SRRT-216ENST00000618262 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
SRRT-216ENST00000618262 PICK1Q9NRD5 415 aa13.71□□□□□ -0.21
SRRT-216ENST00000618262 MAGEC2Q9UBF1 373 aaPredicted RBP13.71□□□□□ -0.21
SRRT-216ENST00000618262 BLOC1S6Q9UL45 172 aa13.71□□□□□ -0.21
SRRT-216ENST00000618262 STX8Q9UNK0 236 aa13.71□□□□□ -0.21
SRRT-216ENST00000618262 CNTNAP1P78357 1384 aa13.71□□□□□ -0.22
SRRT-216ENST00000618262 JAG1P78504 1218 aa13.71□□□□□ -0.22
SRRT-216ENST00000618262 TFAP4Q01664 338 aa13.71□□□□□ -0.22
SRRT-216ENST00000618262 DGKZQ13574 1117 aa13.71□□□□□ -0.22
SRRT-216ENST00000618262 RRP1BQ14684 758 aaKnown RBP13.71□□□□□ -0.22
SRRT-216ENST00000618262 NECAB1Q8N987 351 aa13.71□□□□□ -0.22
SRRT-216ENST00000618262 PIBF1Q8WXW3 757 aa13.71□□□□□ -0.22
SRRT-216ENST00000618262 BRF1Q92994 677 aa13.71□□□□□ -0.22
SRRT-216ENST00000618262 UBA5Q9GZZ9 404 aa13.71□□□□□ -0.22
SRRT-216ENST00000618262 CDK8P49336 464 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 MKRN3Q13064 507 aaKnown RBP13.7□□□□□ -0.22
SRRT-216ENST00000618262 GRM1Q13255 1194 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 Q6ZUG5 572 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 CMTR1Q8N1G2 835 aaKnown RBP13.7□□□□□ -0.22
SRRT-216ENST00000618262 DCPSQ96C86 337 aaKnown RBP13.7□□□□□ -0.22
SRRT-216ENST00000618262 SLC24A3Q9HC58 644 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.7□□□□□ -0.22
SRRT-216ENST00000618262 SERPINB13Q9UIV8 391 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 ABL2P42684 1182 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 APOBRQ0VD83 1088 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 CCDC70Q6NSX1 233 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 PACS2Q86VP3 889 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 SULF1Q8IWU6 871 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 TAF4BQ92750 862 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 ZKSCAN4Q969J2 545 aaPredicted RBP13.7□□□□□ -0.22
SRRT-216ENST00000618262 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
SRRT-216ENST00000618262 PDRG1Q9NUG6 133 aa13.7□□□□□ -0.22
SRRT-216ENST00000618262 TIAM2Q8IVF5 1701 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 PRC1O43663 620 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 NEBLO76041 1014 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 AKR1B1P15121 316 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 AK2P54819 239 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 HDLBPQ00341 1268 aaKnown RBP13.69□□□□□ -0.22
SRRT-216ENST00000618262 IQCF2Q8IXL9 164 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 CCDC34Q96HJ3 373 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 SLX1AQ9BQ83 275 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 METTL14Q9HCE5 456 aaKnown RBP13.69□□□□□ -0.22
SRRT-216ENST00000618262 ARPP21Q9UBL0 812 aaPredicted RBP13.69□□□□□ -0.22
SRRT-216ENST00000618262 HLA-DOAP06340 250 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 ARMC3Q5W041 872 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
SRRT-216ENST00000618262 MORC4Q8TE76 937 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 C17orf50Q8WW18 174 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 YIPF2Q9BWQ6 316 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 CYP46A1Q9Y6A2 500 aa13.69□□□□□ -0.22
SRRT-216ENST00000618262 LARGE1O95461 756 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 ANTXR2P58335 489 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 SRLQ86TD4 932 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 GBP4Q96PP9 640 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 LCMT1Q9UIC8 334 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 VEGFAP15692 232 aaPredicted RBP13.68□□□□□ -0.22
SRRT-216ENST00000618262 PSMC1P62191 440 aaKnown RBP13.68□□□□□ -0.22
SRRT-216ENST00000618262 NCOA7Q8NI08 942 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 CCDC26Q8TAB7 109 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 SNRNP27Q8WVK2 155 aaKnown RBP13.68□□□□□ -0.22
SRRT-216ENST00000618262 IQCGQ9H095 443 aaKnown RBP13.68□□□□□ -0.22
SRRT-216ENST00000618262 NCOA5Q9HCD5 579 aaKnown RBP13.68□□□□□ -0.22
SRRT-216ENST00000618262 POLR2AP24928 1970 aaKnown RBP13.68□□□□□ -0.22
SRRT-216ENST00000618262 IFIT3O14879 490 aaKnown RBP13.68□□□□□ -0.22
SRRT-216ENST00000618262 INPP5BP32019 993 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 NCBP1Q09161 790 aaKnown RBP13.68□□□□□ -0.22
SRRT-216ENST00000618262 RUFY3Q7L099 469 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 TTC6Q86TZ1 520 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 ELOA2Q8IYF1 753 aaPredicted RBP13.68□□□□□ -0.22
SRRT-216ENST00000618262 NUP133Q8WUM0 1156 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 IDI2Q9BXS1 227 aa13.68□□□□□ -0.22
SRRT-216ENST00000618262 RWDD2BP57060 319 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 PDE4BQ07343 736 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 KCNA1Q09470 495 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 RABEP1Q15276 862 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 ZBED3Q96IU2 234 aaPredicted RBP13.67□□□□□ -0.22
SRRT-216ENST00000618262 PI4KBQ9UBF8 816 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 GH2P01242 217 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 MAGEA9P43362 315 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 SPICE1Q8N0Z3 855 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 LRRC47Q8N1G4 583 aaKnown RBP13.67□□□□□ -0.22
SRRT-216ENST00000618262 SMCR8Q8TEV9 937 aaPredicted RBP13.67□□□□□ -0.22
SRRT-216ENST00000618262 FAM151AQ8WW52 585 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 VTI1AQ96AJ9 217 aa13.67□□□□□ -0.22
SRRT-216ENST00000618262 FAXDC2Q96IV6 333 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms