RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 SPZ1Q9BXG8 430 aa18.39■□□□□ 0.53
MALAT1-213ENST00000618227 SLKQ9H2G2 1235 aaPredicted RBP18.39■□□□□ 0.53
MALAT1-213ENST00000618227 FAM217BQ9NTX9 383 aaPredicted RBP18.39■□□□□ 0.53
MALAT1-213ENST00000618227 PNMA2Q9UL42 364 aa18.39■□□□□ 0.53
MALAT1-213ENST00000618227 CA12O43570 354 aa18.38■□□□□ 0.53
MALAT1-213ENST00000618227 MAP2K1Q02750 393 aaPredicted RBP18.38■□□□□ 0.53
MALAT1-213ENST00000618227 TMTC3Q6ZXV5 915 aa18.38■□□□□ 0.53
MALAT1-213ENST00000618227 STAG2Q8N3U4 1231 aa18.38■□□□□ 0.53
MALAT1-213ENST00000618227 MYL10Q9BUA6 226 aa18.38■□□□□ 0.53
MALAT1-213ENST00000618227 RIOX1Q9H6W3 641 aa18.38■□□□□ 0.53
MALAT1-213ENST00000618227 GPCPD1Q9NPB8 672 aa18.38■□□□□ 0.53
MALAT1-213ENST00000618227 HERVK_113P62684 666 aa18.37■□□□□ 0.53
MALAT1-213ENST00000618227 ME3Q16798 604 aa18.37■□□□□ 0.53
MALAT1-213ENST00000618227 SYDE2Q5VT97 1194 aa18.37■□□□□ 0.53
MALAT1-213ENST00000618227 CPLX2Q6PUV4 134 aaKnown RBP18.37■□□□□ 0.53
MALAT1-213ENST00000618227 MTMR8Q96EF0 704 aa18.37■□□□□ 0.53
MALAT1-213ENST00000618227 P2RX7Q99572 595 aaKnown RBP18.37■□□□□ 0.53
MALAT1-213ENST00000618227 SAGE1Q9NXZ1 904 aa18.37■□□□□ 0.53
MALAT1-213ENST00000618227 RBM27Q9P2N5 1060 aaKnown RBP18.37■□□□□ 0.53
MALAT1-213ENST00000618227 NAP1L2Q9ULW6 460 aaPredicted RBP18.37■□□□□ 0.53
MALAT1-213ENST00000618227 MTMR7Q9Y216 660 aa18.37■□□□□ 0.53
MALAT1-213ENST00000618227 FRMPD2Q68DX3 1309 aaPredicted RBP18.37■□□□□ 0.53
MALAT1-213ENST00000618227 SPDYE16A6NNV3 312 aaPredicted RBP18.36■□□□□ 0.53
MALAT1-213ENST00000618227 ATP2A1O14983 1001 aa18.36■□□□□ 0.53
MALAT1-213ENST00000618227 GOLGA8HP0CJ92 632 aa18.36■□□□□ 0.53
MALAT1-213ENST00000618227 IFNAR1P17181 557 aa18.36■□□□□ 0.53
MALAT1-213ENST00000618227 OAZ1P54368 228 aa18.36■□□□□ 0.53
MALAT1-213ENST00000618227 TRAF1Q13077 416 aa18.36■□□□□ 0.53
MALAT1-213ENST00000618227 TTBK2Q6IQ55 1244 aa18.36■□□□□ 0.53
MALAT1-213ENST00000618227 GTF3C6Q969F1 213 aa18.36■□□□□ 0.53
MALAT1-213ENST00000618227 LLPHQ9BRT6 129 aaKnown RBP18.36■□□□□ 0.53
MALAT1-213ENST00000618227 ZFYVE28Q9HCC9 887 aa18.36■□□□□ 0.53
MALAT1-213ENST00000618227 FBXO28Q9NVF7 368 aa18.36■□□□□ 0.53
MALAT1-213ENST00000618227 PRR12Q9ULL5 1215 aa18.36■□□□□ 0.53
MALAT1-213ENST00000618227 RABGAP1Q9Y3P9 1069 aa18.36■□□□□ 0.53
MALAT1-213ENST00000618227 VWA5AO00534 786 aa18.35■□□□□ 0.53
MALAT1-213ENST00000618227 ZBED4O75132 1171 aa18.35■□□□□ 0.53
MALAT1-213ENST00000618227 CDKL5O76039 1030 aa18.35■□□□□ 0.53
MALAT1-213ENST00000618227 CDC27P30260 824 aa18.35■□□□□ 0.53
MALAT1-213ENST00000618227 ADD1P35611 737 aaKnown RBP18.35■□□□□ 0.53
MALAT1-213ENST00000618227 FUT2Q10981 343 aa18.35■□□□□ 0.53
MALAT1-213ENST00000618227 IKQ13123 557 aaPredicted RBP18.35■□□□□ 0.53
MALAT1-213ENST00000618227 TAF1CQ15572 869 aaPredicted RBP18.35■□□□□ 0.53
MALAT1-213ENST00000618227 RASGRP2Q7LDG7 609 aa18.35■□□□□ 0.53
MALAT1-213ENST00000618227 ADGRF4Q8IZF3 695 aa18.35■□□□□ 0.53
MALAT1-213ENST00000618227 SRBD1Q8N5C6 995 aaKnown RBP18.35■□□□□ 0.53
MALAT1-213ENST00000618227 RANBP17Q9H2T7 1088 aaKnown RBP18.35■□□□□ 0.53
MALAT1-213ENST00000618227 SLC38A10Q9HBR0 1119 aa18.35■□□□□ 0.53
MALAT1-213ENST00000618227 ADGRA2Q96PE1 1338 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 CPLX1O14810 134 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 TLR2O60603 784 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 CD2BP2O95400 341 aaKnown RBP18.34■□□□□ 0.53
MALAT1-213ENST00000618227 RXRAP19793 462 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 SCRN1Q12765 414 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 NTRK3Q16288 839 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 NOM1Q5C9Z4 860 aaKnown RBP18.34■□□□□ 0.53
MALAT1-213ENST00000618227 CCDC144CPQ8IYA2 1237 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 SMCR8Q8TEV9 937 aaPredicted RBP18.34■□□□□ 0.53
MALAT1-213ENST00000618227 KIFC2Q96AC6 838 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 TMX3Q96JJ7 454 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 LARP6Q9BRS8 491 aaKnown RBP18.34■□□□□ 0.53
MALAT1-213ENST00000618227 UBA5Q9GZZ9 404 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 MAF1Q9H063 256 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 JMJD4Q9H9V9 463 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 MORF4L1Q9UBU8 362 aa18.34■□□□□ 0.53
MALAT1-213ENST00000618227 ISY1Q9ULR0 285 aaKnown RBP18.34■□□□□ 0.53
MALAT1-213ENST00000618227 CYTH3O43739 400 aa18.33■□□□□ 0.52
MALAT1-213ENST00000618227 SLC16A2P36021 539 aa18.33■□□□□ 0.52
MALAT1-213ENST00000618227 CCT2P78371 535 aaKnown RBP18.33■□□□□ 0.52
MALAT1-213ENST00000618227 JMYQ8N9B5 988 aa18.33■□□□□ 0.52
MALAT1-213ENST00000618227 REPS2Q8NFH8 660 aa18.33■□□□□ 0.52
MALAT1-213ENST00000618227 ATG4CQ96DT6 458 aa18.33■□□□□ 0.52
MALAT1-213ENST00000618227 RNF26Q9BY78 433 aaPredicted RBP18.33■□□□□ 0.52
MALAT1-213ENST00000618227 RNF186Q9NXI6 227 aa18.33■□□□□ 0.52
MALAT1-213ENST00000618227 RBPJLQ9UBG7 517 aa18.33■□□□□ 0.52
MALAT1-213ENST00000618227 PNMA6FA0A0J9YX94 578 aa18.32■□□□□ 0.52
MALAT1-213ENST00000618227 ZBTB5O15062 677 aa18.32■□□□□ 0.52
MALAT1-213ENST00000618227 PRPF3O43395 683 aaKnown RBP18.32■□□□□ 0.52
MALAT1-213ENST00000618227 PLEKHA8P1O95397 391 aa18.32■□□□□ 0.52
MALAT1-213ENST00000618227 LARGE1O95461 756 aa18.32■□□□□ 0.52
MALAT1-213ENST00000618227 CYP2C8P10632 490 aa18.32■□□□□ 0.52
MALAT1-213ENST00000618227 COPB2P35606 906 aa18.32■□□□□ 0.52
MALAT1-213ENST00000618227 FAM110CQ1W6H9 321 aa18.32■□□□□ 0.52
MALAT1-213ENST00000618227 SLC35G1Q2M3R5 365 aa18.32■□□□□ 0.52
MALAT1-213ENST00000618227 C17orf99Q6UX52 265 aa18.32■□□□□ 0.52
MALAT1-213ENST00000618227 NBPF11Q86T75 865 aa18.32■□□□□ 0.52
MALAT1-213ENST00000618227 RAB11FIP4Q86YS3 637 aa18.32■□□□□ 0.52
MALAT1-213ENST00000618227 FAM177A1Q8N128 213 aaPredicted RBP18.32■□□□□ 0.52
MALAT1-213ENST00000618227 RRP36Q96EU6 259 aaKnown RBP18.32■□□□□ 0.52
MALAT1-213ENST00000618227 hCG_1984214I3L0E3 225 aa18.31■□□□□ 0.52
MALAT1-213ENST00000618227 K7ELQ4 463 aaPredicted RBP18.31■□□□□ 0.52
MALAT1-213ENST00000618227 ICAM1P05362 532 aa18.31■□□□□ 0.52
MALAT1-213ENST00000618227 BCRP11274 1271 aa18.31■□□□□ 0.52
MALAT1-213ENST00000618227 STK3Q13188 491 aa18.31■□□□□ 0.52
MALAT1-213ENST00000618227 CRHR2Q13324 411 aa18.31■□□□□ 0.52
MALAT1-213ENST00000618227 CUL4AQ13619 759 aa18.31■□□□□ 0.52
MALAT1-213ENST00000618227 TKFCQ3LXA3 575 aa18.31■□□□□ 0.52
MALAT1-213ENST00000618227 NOL8Q76FK4 1167 aaKnown RBP18.31■□□□□ 0.52
MALAT1-213ENST00000618227 TEX2Q8IWB9 1127 aa18.31■□□□□ 0.52
MALAT1-213ENST00000618227 TRIM22Q8IYM9 498 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms