RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 PRPF38AQ8NAV1 312 aaKnown RBP26.42■■□□□ 1.82
CBWD3-213ENST00000618217 CPVLQ9H3G5 476 aa26.42■■□□□ 1.82
CBWD3-213ENST00000618217 NAP1L2Q9ULW6 460 aaPredicted RBP26.42■■□□□ 1.82
CBWD3-213ENST00000618217 LIMCH1Q9UPQ0 1083 aa26.42■■□□□ 1.82
CBWD3-213ENST00000618217 A0A0G2JMZ2 1700 aa26.41■■□□□ 1.82
CBWD3-213ENST00000618217 CDC27P30260 824 aa26.41■■□□□ 1.82
CBWD3-213ENST00000618217 NBPF11Q86T75 865 aa26.41■■□□□ 1.82
CBWD3-213ENST00000618217 ADGRA2Q96PE1 1338 aa26.41■■□□□ 1.82
CBWD3-213ENST00000618217 PARK7Q99497 189 aaKnown RBP26.41■■□□□ 1.82
CBWD3-213ENST00000618217 UBA5Q9GZZ9 404 aa26.41■■□□□ 1.82
CBWD3-213ENST00000618217 COL11A1P12107 1806 aaPredicted RBP26.4■■□□□ 1.82
CBWD3-213ENST00000618217 GOLGA8AA7E2F4 631 aa26.4■■□□□ 1.82
CBWD3-213ENST00000618217 CA12O43570 354 aa26.4■■□□□ 1.82
CBWD3-213ENST00000618217 LARGE1O95461 756 aa26.4■■□□□ 1.82
CBWD3-213ENST00000618217 METAP2P50579 478 aaKnown RBP eCLIP26.4■■□□□ 1.82
CBWD3-213ENST00000618217 PPP2R5BQ15173 497 aa26.4■■□□□ 1.82
CBWD3-213ENST00000618217 TAF1CQ15572 869 aaPredicted RBP26.4■■□□□ 1.82
CBWD3-213ENST00000618217 ME3Q16798 604 aa26.4■■□□□ 1.82
CBWD3-213ENST00000618217 RTN1Q16799 776 aa26.4■■□□□ 1.82
CBWD3-213ENST00000618217 NOL8Q76FK4 1167 aaKnown RBP26.4■■□□□ 1.82
CBWD3-213ENST00000618217 CFHR5Q9BXR6 569 aa26.4■■□□□ 1.82
CBWD3-213ENST00000618217 RNF186Q9NXI6 227 aa26.4■■□□□ 1.82
CBWD3-213ENST00000618217 PRR12Q9ULL5 1215 aa26.4■■□□□ 1.82
CBWD3-213ENST00000618217 ISY1Q9ULR0 285 aaKnown RBP26.4■■□□□ 1.82
CBWD3-213ENST00000618217 PFKFB2O60825 505 aa26.39■■□□□ 1.82
CBWD3-213ENST00000618217 SYDE2Q5VT97 1194 aa26.39■■□□□ 1.82
CBWD3-213ENST00000618217 ATG4CQ96DT6 458 aa26.39■■□□□ 1.82
CBWD3-213ENST00000618217 CYTH3O43739 400 aa26.39■■□□□ 1.81
CBWD3-213ENST00000618217 PLEKHA8P1O95397 391 aa26.39■■□□□ 1.81
CBWD3-213ENST00000618217 ADD1P35611 737 aaKnown RBP26.39■■□□□ 1.81
CBWD3-213ENST00000618217 FUT2Q10981 343 aa26.39■■□□□ 1.81
CBWD3-213ENST00000618217 CRHR2Q13324 411 aa26.39■■□□□ 1.81
CBWD3-213ENST00000618217 TMTC3Q6ZXV5 915 aa26.39■■□□□ 1.81
CBWD3-213ENST00000618217 SRBD1Q8N5C6 995 aaKnown RBP26.39■■□□□ 1.81
CBWD3-213ENST00000618217 JMYQ8N9B5 988 aa26.39■■□□□ 1.81
CBWD3-213ENST00000618217 KIFC2Q96AC6 838 aa26.39■■□□□ 1.81
CBWD3-213ENST00000618217 NCOA5Q9HCD5 579 aaKnown RBP26.39■■□□□ 1.81
CBWD3-213ENST00000618217 RBM28Q9NW13 759 aaKnown RBP26.39■■□□□ 1.81
CBWD3-213ENST00000618217 VWA5AO00534 786 aa26.38■■□□□ 1.81
CBWD3-213ENST00000618217 SMARCA1P28370 1054 aa26.38■■□□□ 1.81
CBWD3-213ENST00000618217 GNAQP50148 359 aa26.38■■□□□ 1.81
CBWD3-213ENST00000618217 MAP2K1Q02750 393 aaPredicted RBP26.38■■□□□ 1.81
CBWD3-213ENST00000618217 LZTS2Q9BRK4 669 aa26.38■■□□□ 1.81
CBWD3-213ENST00000618217 R3HDMLQ9H3Y0 253 aa26.38■■□□□ 1.81
CBWD3-213ENST00000618217 RIOX1Q9H6W3 641 aa26.38■■□□□ 1.81
CBWD3-213ENST00000618217 RBPJLQ9UBG7 517 aa26.38■■□□□ 1.81
CBWD3-213ENST00000618217 CCT2P78371 535 aaKnown RBP26.37■■□□□ 1.81
CBWD3-213ENST00000618217 IKQ13123 557 aaPredicted RBP26.37■■□□□ 1.81
CBWD3-213ENST00000618217 STK3Q13188 491 aa26.37■■□□□ 1.81
CBWD3-213ENST00000618217 ADGRF4Q8IZF3 695 aa26.37■■□□□ 1.81
CBWD3-213ENST00000618217 REPS2Q8NFH8 660 aa26.37■■□□□ 1.81
CBWD3-213ENST00000618217 SPZ1Q9BXG8 430 aa26.37■■□□□ 1.81
CBWD3-213ENST00000618217 JMJD4Q9H9V9 463 aa26.37■■□□□ 1.81
CBWD3-213ENST00000618217 ZFYVE28Q9HCC9 887 aa26.37■■□□□ 1.81
CBWD3-213ENST00000618217 WBP1LQ9NX94 342 aa26.37■■□□□ 1.81
CBWD3-213ENST00000618217 TLR2O60603 784 aa26.36■■□□□ 1.81
CBWD3-213ENST00000618217 TRPA1O75762 1119 aa26.36■■□□□ 1.81
CBWD3-213ENST00000618217 MCM2P49736 904 aa26.36■■□□□ 1.81
CBWD3-213ENST00000618217 SCRN1Q12765 414 aa26.36■■□□□ 1.81
CBWD3-213ENST00000618217 NTRK3Q16288 839 aa26.36■■□□□ 1.81
CBWD3-213ENST00000618217 SAMD1Q6SPF0 538 aaPredicted RBP26.36■■□□□ 1.81
CBWD3-213ENST00000618217 CMTR1Q8N1G2 835 aaKnown RBP26.36■■□□□ 1.81
CBWD3-213ENST00000618217 SMCR8Q8TEV9 937 aaPredicted RBP26.36■■□□□ 1.81
CBWD3-213ENST00000618217 MTMR8Q96EF0 704 aa26.36■■□□□ 1.81
CBWD3-213ENST00000618217 SLKQ9H2G2 1235 aaPredicted RBP26.36■■□□□ 1.81
CBWD3-213ENST00000618217 SLC38A10Q9HBR0 1119 aa26.36■■□□□ 1.81
CBWD3-213ENST00000618217 TXNRD2Q9NNW7 524 aa26.36■■□□□ 1.81
CBWD3-213ENST00000618217 CCDC196A0A1B0GTZ2 297 aa26.36■■□□□ 1.81
CBWD3-213ENST00000618217 CNMDO75829 334 aa26.36■■□□□ 1.81
CBWD3-213ENST00000618217 GCLCP48506 637 aaPredicted RBP26.36■■□□□ 1.81
CBWD3-213ENST00000618217 GTF3C2Q8WUA4 911 aaPredicted RBP26.36■■□□□ 1.81
CBWD3-213ENST00000618217 ZSCAN31Q96LW9 406 aaPredicted RBP26.36■■□□□ 1.81
CBWD3-213ENST00000618217 RANBP17Q9H2T7 1088 aaKnown RBP26.36■■□□□ 1.81
CBWD3-213ENST00000618217 SAGE1Q9NXZ1 904 aa26.36■■□□□ 1.81
CBWD3-213ENST00000618217 PEX10O60683 326 aa26.35■■□□□ 1.81
CBWD3-213ENST00000618217 FDX1P10109 184 aa26.35■■□□□ 1.81
CBWD3-213ENST00000618217 ST3GAL1Q11201 340 aa26.35■■□□□ 1.81
CBWD3-213ENST00000618217 C17orf99Q6UX52 265 aa26.35■■□□□ 1.81
CBWD3-213ENST00000618217 MB21D1Q8N884 522 aa26.35■■□□□ 1.81
CBWD3-213ENST00000618217 NECAB1Q8N987 351 aa26.35■■□□□ 1.81
CBWD3-213ENST00000618217 GTF3C6Q969F1 213 aa26.35■■□□□ 1.81
CBWD3-213ENST00000618217 BTBD7Q9P203 1132 aa26.35■■□□□ 1.81
CBWD3-213ENST00000618217 RABGAP1Q9Y3P9 1069 aa26.35■■□□□ 1.81
CBWD3-213ENST00000618217 SMCHD1A6NHR9 2005 aa26.35■■□□□ 1.81
CBWD3-213ENST00000618217 MYH6P13533 1939 aa26.34■■□□□ 1.81
CBWD3-213ENST00000618217 BCRP11274 1271 aa26.34■■□□□ 1.81
CBWD3-213ENST00000618217 TBC1D8O95759 1140 aa26.33■■□□□ 1.81
CBWD3-213ENST00000618217 SNAP25P60880 206 aa26.33■■□□□ 1.81
CBWD3-213ENST00000618217 TMEM132BQ14DG7 1078 aa26.33■■□□□ 1.81
CBWD3-213ENST00000618217 SNX21Q969T3 373 aa26.33■■□□□ 1.81
CBWD3-213ENST00000618217 VAT1LQ9HCJ6 419 aa26.33■■□□□ 1.81
CBWD3-213ENST00000618217 SH2B1Q9NRF2 756 aaPredicted RBP26.33■■□□□ 1.81
CBWD3-213ENST00000618217 MORF4L1Q9UBU8 362 aa26.33■■□□□ 1.81
CBWD3-213ENST00000618217 ZNF214Q9UL59 606 aaPredicted RBP26.33■■□□□ 1.81
CBWD3-213ENST00000618217 ZNF536O15090 1300 aa26.33■■□□□ 1.81
CBWD3-213ENST00000618217 TMX3Q96JJ7 454 aa26.32■■□□□ 1.8
CBWD3-213ENST00000618217 CPA4Q9UI42 421 aa26.32■■□□□ 1.8
CBWD3-213ENST00000618217 ATP2A1O14983 1001 aa26.32■■□□□ 1.8
CBWD3-213ENST00000618217 ZBED4O75132 1171 aa26.32■■□□□ 1.8
CBWD3-213ENST00000618217 IFNAR1P17181 557 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms