RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 EDC3Q96F86 508 aaKnown RBP12.21□□□□□ -0.45
POLR2A-209ENST00000617998 PPP2R3BQ9Y5P8 575 aa12.21□□□□□ -0.45
POLR2A-209ENST00000617998 SEC24BO95487 1268 aa12.21□□□□□ -0.45
POLR2A-209ENST00000617998 MAPK4P31152 587 aa12.21□□□□□ -0.45
POLR2A-209ENST00000617998 APOBRQ0VD83 1088 aa12.21□□□□□ -0.45
POLR2A-209ENST00000617998 RYBPQ8N488 228 aaPredicted RBP12.21□□□□□ -0.45
POLR2A-209ENST00000617998 ZSCAN10Q96SZ4 725 aaPredicted RBP12.21□□□□□ -0.45
POLR2A-209ENST00000617998 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.46
POLR2A-209ENST00000617998 PSAPP07602 524 aa12.21□□□□□ -0.46
POLR2A-209ENST00000617998 EZRP15311 586 aaKnown RBP12.21□□□□□ -0.46
POLR2A-209ENST00000617998 ANO1Q5XXA6 986 aa12.21□□□□□ -0.46
POLR2A-209ENST00000617998 ZNF577Q9BSK1 485 aa12.21□□□□□ -0.46
POLR2A-209ENST00000617998 SUGT1Q9Y2Z0 365 aa12.21□□□□□ -0.46
POLR2A-209ENST00000617998 GSTTP1A0A1W2PQM5 241 aa12.21□□□□□ -0.46
POLR2A-209ENST00000617998 IWS1Q96ST2 819 aa12.21□□□□□ -0.46
POLR2A-209ENST00000617998 NBPF26B4DH59 902 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 CYP4F22Q6NT55 531 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 SCAND2PQ9GZW5 306 aaPredicted RBP12.2□□□□□ -0.46
POLR2A-209ENST00000617998 SYNDIG1Q9H7V2 258 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 PQBP1O60828 265 aaKnown RBP12.2□□□□□ -0.46
POLR2A-209ENST00000617998 SLC25A27O95847 323 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 CCDC192P0DO97 292 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 HSPD1P10809 573 aaKnown RBP12.2□□□□□ -0.46
POLR2A-209ENST00000617998 DMP1Q13316 513 aaPredicted RBP12.2□□□□□ -0.46
POLR2A-209ENST00000617998 CCDC157Q569K6 752 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 TTC22Q5TAA0 569 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 SND1Q7KZF4 910 aaKnown RBP eCLIP12.2□□□□□ -0.46
POLR2A-209ENST00000617998 MYOCDQ8IZQ8 938 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 SNX29Q8TEQ0 813 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.2□□□□□ -0.464e-7■■□□□ 12.7
POLR2A-209ENST00000617998 MYPNQ86TC9 1320 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 TULP4Q9NRJ4 1543 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 SUPT20HL2P0C7V6 817 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 NEDD9Q14511 834 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 ZNF174Q15697 407 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 NSUN6Q8TEA1 469 aaKnown RBP12.2□□□□□ -0.46
POLR2A-209ENST00000617998 DIP2CQ9Y2E4 1556 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 EPB41P11171 864 aaKnown RBP12.2□□□□□ -0.46
POLR2A-209ENST00000617998 SPATA33Q96N06 139 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 ANKFY1Q9P2R3 1169 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 GLTPD2A6NH11 291 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 TMEM191BP0C7N4 346 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 CBX1P83916 185 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 NECAB2Q7Z6G3 386 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 RPUSD2Q8IZ73 545 aaKnown RBP12.2□□□□□ -0.46
POLR2A-209ENST00000617998 MB21D1Q8N884 522 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 TBC1D2Q9BYX2 928 aa12.2□□□□□ -0.46
POLR2A-209ENST00000617998 ADORA1P30542 326 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 THNSL1Q8IYQ7 743 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 MNS1Q8NEH6 495 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 MAK16Q9BXY0 300 aaKnown RBP12.19□□□□□ -0.46
POLR2A-209ENST00000617998 NUP62CLQ9H1M0 184 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 TPCN1Q9ULQ1 816 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 LRWD1Q9UFC0 647 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 CYP2E1P05181 493 aaPredicted RBP12.19□□□□□ -0.46
POLR2A-209ENST00000617998 DCAF17Q5H9S7 520 aaPredicted RBP12.19□□□□□ -0.46
POLR2A-209ENST00000617998 RNF219Q5W0B1 726 aaPredicted RBP12.19□□□□□ -0.46
POLR2A-209ENST00000617998 THEM5Q8N1Q8 247 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 FSIP1Q8NA03 581 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 STAG3L1P0CL83 205 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 JAKMIP2Q96AA8 810 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 PSMA7O14818 248 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 CPT1AP50416 773 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 GOLGA8FQ08AF8 430 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 GOLGA8DPQ0D2H9 430 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 LIN9Q5TKA1 542 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 SLFN12Q8IYM2 578 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
POLR2A-209ENST00000617998 SLU7O95391 586 aaKnown RBP12.18□□□□□ -0.46
POLR2A-209ENST00000617998 ATXN8OSP0DMR3 200 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 CXCL9Q07325 125 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 PRPF38AQ8NAV1 312 aaKnown RBP12.18□□□□□ -0.46
POLR2A-209ENST00000617998 SENP6Q9GZR1 1112 aaPredicted RBP12.18□□□□□ -0.46
POLR2A-209ENST00000617998 SNX25Q9H3E2 840 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 ALKQ9UM73 1620 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
POLR2A-209ENST00000617998 ADM5C9JUS6 153 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 CTSHP09668 335 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 TXNP10599 105 aaKnown RBP12.18□□□□□ -0.46
POLR2A-209ENST00000617998 VEPH1Q14D04 833 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 SPDYE2Q495Y8 402 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 IQCEQ6IPM2 695 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 RDH13Q8NBN7 331 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 KIFAP3Q92845 792 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 NLRP4Q96MN2 994 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 POLR3EQ9NVU0 708 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 PLCD1P51178 756 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 SEPT2Q15019 361 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 MTERF2Q49AM1 385 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 ENTPD7Q9NQZ7 604 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 NPC1L1Q9UHC9 1359 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 PCP11498 1178 aaKnown RBP12.18□□□□□ -0.46
POLR2A-209ENST00000617998 HESX1Q9UBX0 185 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 KIF23Q02241 960 aaPredicted RBP12.18□□□□□ -0.46
POLR2A-209ENST00000617998 NMRK2Q9NPI5 230 aa12.18□□□□□ -0.46
POLR2A-209ENST00000617998 MYOM2P54296 1465 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 CDK12Q9NYV4 1490 aaPredicted RBP12.17□□□□□ -0.46
POLR2A-209ENST00000617998 GJB2P29033 226 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 KRT9P35527 623 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 ATXN3P54252 364 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms