RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	SPECC1	Q5M775	1068 aa		11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	GSPT2	Q8IYD1	628 aa	Known RBP	11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	CPLX3	Q8WVH0	158 aa		11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	LMBR1	Q8WVP7	490 aa		11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	GDAP1L1	Q96MZ0	367 aa		11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	PURB	Q96QR8	312 aa	Known RBP	11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	SLF1	Q9BQI6	1058 aa		11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	RABEP2	Q9H5N1	569 aa		11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	CPSF2	Q9P2I0	782 aa	Known RBP	11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	GUCA1B	Q9UMX6	200 aa		11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	MYH8	P13535	1937 aa		11.97	□□□□□ -0.49
CPEB1-215	ENST00000617958	SH2B2	O14492	632 aa	Predicted RBP	11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	PDIA6	Q15084	440 aa		11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	SLC5A9	Q2M3M2	681 aa		11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	DNAJC10	Q8IXB1	793 aa		11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	CAGE1	Q8TC20	777 aa		11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	CYFIP2	Q96F07	1278 aa		11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	GJD4	Q96KN9	370 aa	Predicted RBP	11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	HPS5	Q9UPZ3	1129 aa		11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	HDLBP	Q00341	1268 aa	Known RBP	11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	TMED8	Q6PL24	325 aa	Predicted RBP	11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	CCDC129	Q6ZRS4	1044 aa		11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	SPDL1	Q96EA4	605 aa		11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	NUCKS1	Q9H1E3	243 aa	Known RBP	11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	KDM4C	Q9H3R0	1056 aa		11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	HDAC6	Q9UBN7	1215 aa		11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.96	□□□□□ -0.49
CPEB1-215	ENST00000617958	SPEF2	Q9C093	1822 aa		11.96	□□□□□ -0.5
CPEB1-215	ENST00000617958	ERICH2	A1L162	156 aa		11.96	□□□□□ -0.5
CPEB1-215	ENST00000617958	NBPF26	B4DH59	902 aa		11.96	□□□□□ -0.5
CPEB1-215	ENST00000617958	GRM8	O00222	908 aa		11.96	□□□□□ -0.5
CPEB1-215	ENST00000617958	CPLX1	O14810	134 aa		11.96	□□□□□ -0.5
CPEB1-215	ENST00000617958	CDKL5	O76039	1030 aa		11.96	□□□□□ -0.5
CPEB1-215	ENST00000617958	NKX1-1	Q15270	411 aa	Predicted RBP	11.96	□□□□□ -0.5
CPEB1-215	ENST00000617958	NBPF15	Q8N660	670 aa		11.96	□□□□□ -0.5
CPEB1-215	ENST00000617958	RRP36	Q96EU6	259 aa	Known RBP	11.96	□□□□□ -0.5
CPEB1-215	ENST00000617958	ZIM3	Q96PE6	472 aa		11.96	□□□□□ -0.5
CPEB1-215	ENST00000617958	PARP4	Q9UKK3	1724 aa	Known RBP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	MPHOSPH10	O00566	681 aa	Known RBP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	AHCYL1	O43865	530 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	ZMYND10	O75800	440 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	FES	P07332	822 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	PTPRE	P23469	700 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	RPS6KA3	P51812	740 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	KSR2	Q6VAB6	950 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	TSEN2	Q8NCE0	465 aa	Known RBP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	LINS1	Q8NG48	757 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	CUL5	Q93034	780 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	KAZALD1	Q96I82	304 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	ATP6V1G3	Q96LB4	118 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	SCLT1	Q96NL6	688 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	OSBPL9	Q96SU4	736 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	DNAJC7	Q99615	494 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	OSBPL7	Q9BZF2	842 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	TMX4	Q9H1E5	349 aa	Predicted RBP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	STIM2	Q9P246	746 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	PDE2A	O00408	941 aa	Predicted RBP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	FOXN1	O15353	648 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	SCTR	P47872	440 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	CWF19L2	Q2TBE0	894 aa	Known RBP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	CCDC122	Q5T0U0	273 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	APLF	Q8IW19	511 aa	Predicted RBP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	SEPT12	Q8IYM1	358 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	KIF9	Q9HAQ2	790 aa		11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	DBF4	Q9UBU7	674 aa	Predicted RBP	11.95	□□□□□ -0.5
CPEB1-215	ENST00000617958	C5	P01031	1676 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	ENC1	O14682	589 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	ACTN4	O43707	911 aa	Known RBP	11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	ATP6V1G2	O95670	118 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	GSTA1	P08263	222 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	PAEP	P09466	180 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	KRT9	P35527	623 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	ITGB3BP	Q13352	177 aa	Predicted RBP	11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	ZMYM1	Q5SVZ6	1142 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	SUCLG2	Q96I99	432 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	SPAG5	Q96R06	1193 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	TSGA10	Q9BZW7	698 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	COPRS	Q9NQ92	184 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	DBNL	Q9UJU6	430 aa	Known RBP	11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	TRPC6	Q9Y210	931 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	C15orf41	Q9Y2V0	281 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	SIPA1L3	O60292	1781 aa	Predicted RBP	11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	GOLGA8B	A8MQT2	603 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	DNM1L	O00429	736 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	VAV2	P52735	878 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	HERVK_113	P62684	666 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	GUCY1A3	Q02108	690 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	CFAP58	Q5T655	872 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	MIS18BP1	Q6P0N0	1132 aa		11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	BZW1	Q7L1Q6	419 aa	Known RBP	11.94	□□□□□ -0.5
CPEB1-215	ENST00000617958	CREG2	Q8IUH2	290 aa		11.94	□□□□□ -0.5

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