RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 TNNC1P63316 161 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 ANKRD20A2Q5SQ80 823 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 TTC39AQ5SRH9 613 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 ANKRD20A1Q5TYW2 823 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 ANKRD20A3Q5VUR7 823 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 CCDC174Q6PII3 467 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 KDM7AQ6ZMT4 941 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 MCM10Q7L590 875 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 CHST3Q7LGC8 479 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 PROSER2Q86WR7 435 aaPredicted RBP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 FNBP4Q8N3X1 1017 aaPredicted RBP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 AFAP1Q8N556 730 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 TAB2Q9NYJ8 693 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 KCNH3Q9ULD8 1083 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 TET3O43151 1660 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 ZFYVE16Q7Z3T8 1539 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 A0A1W2PQ27 194 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 A0A1W2PQ64 194 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 A0A1W2PQD8 194 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 ESYT3A0FGR9 886 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 CCT8L1PA6NM43 557 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 GNAT2P19087 354 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 TDRD12Q587J7 1177 aaKnown RBP8.15□□□□□ -1.1
PDE6A-205ENST00000617647 DAAM2Q86T65 1068 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 GPIHBP1Q8IV16 184 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 TMTC2Q8N394 836 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 ZCRB1Q8TBF4 217 aaKnown RBP8.15□□□□□ -1.1
PDE6A-205ENST00000617647 CDK5RAP3Q96JB5 506 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 FAM227BQ96M60 508 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 LRRC1Q9BTT6 524 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 CTTNBP2NLQ9P2B4 639 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 KDM5AP29375 1690 aaKnown RBP8.15□□□□□ -1.1
PDE6A-205ENST00000617647 GOLGA8BA8MQT2 603 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 ZNF185O15231 689 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 RFC5P40937 340 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 RCN2Q14257 317 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 FAM47EQ6ZV65 393 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 GALNT15Q8N3T1 639 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.15□□□□□ -1.1
PDE6A-205ENST00000617647 TRIM11Q96F44 468 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 KCNK9Q9NPC2 374 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 TBC1D2BQ9UPU7 963 aa8.15□□□□□ -1.1
PDE6A-205ENST00000617647 ATXN2Q99700 1313 aaKnown RBP8.15□□□□□ -1.11
PDE6A-205ENST00000617647 SYNRGQ9UMZ2 1314 aa8.15□□□□□ -1.11
PDE6A-205ENST00000617647 DPPA5A6NC42 116 aa8.15□□□□□ -1.11
PDE6A-205ENST00000617647 LSM1O15116 133 aaKnown RBP8.15□□□□□ -1.11
PDE6A-205ENST00000617647 RRAGBQ5VZM2 374 aa8.15□□□□□ -1.11
PDE6A-205ENST00000617647 CDCA2Q69YH5 1023 aaPredicted RBP8.15□□□□□ -1.11
PDE6A-205ENST00000617647 CLMNQ96JQ2 1002 aa8.15□□□□□ -1.11
PDE6A-205ENST00000617647 CENPKQ9BS16 269 aa8.15□□□□□ -1.11
PDE6A-205ENST00000617647 CARD9Q9H257 536 aa8.15□□□□□ -1.11
PDE6A-205ENST00000617647 NLRP2Q9NX02 1062 aa8.15□□□□□ -1.11
PDE6A-205ENST00000617647 ATP7AQ04656 1500 aa8.15□□□□□ -1.11
PDE6A-205ENST00000617647 VWDEQ8N2E2 1590 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 VIL1P09327 827 aaKnown RBP8.14□□□□□ -1.11
PDE6A-205ENST00000617647 KCNA3P22001 575 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 PSMD7P51665 324 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 INHBEP58166 350 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 BLMHQ13867 455 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 SOGA3Q5TF21 947 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 ANKRD24Q8TF21 1146 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 ZNF653Q96CK0 615 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 PHACTR3Q96KR7 559 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 FAM81BQ96LP2 452 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 TRAIPQ9BWF2 469 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 TMOD4Q9NZQ9 345 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 TSC22D4Q9Y3Q8 395 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 MYO3AQ8NEV4 1616 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 ARAP3Q8WWN8 1544 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 IGF2BP3O00425 579 aaKnown RBP eCLIP8.14□□□□□ -1.11
PDE6A-205ENST00000617647 MFAP3LO75121 409 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 CHGBP05060 677 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 SKOR1P84550 965 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 SPAG1Q07617 926 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 CFAP221Q4G0U5 840 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 PPP4R3AQ6IN85 833 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 PRCCQ92733 491 aaPredicted RBP8.14□□□□□ -1.11
PDE6A-205ENST00000617647 CHMP6Q96FZ7 201 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 PUS7Q96PZ0 661 aaKnown RBP8.14□□□□□ -1.11
PDE6A-205ENST00000617647 IL25Q9H293 177 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 TRIM10Q9UDY6 481 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 CLTCL1P53675 1640 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 MINK1Q8N4C8 1332 aaPredicted RBP8.14□□□□□ -1.11
PDE6A-205ENST00000617647 TMEM110-MUSTN1A8MSY1 372 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 SUN1O94901 812 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 VPS41P49754 854 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 GLE1Q53GS7 698 aaKnown RBP8.14□□□□□ -1.11
PDE6A-205ENST00000617647 TTMPQ5BVD1 217 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.14□□□□□ -1.11
PDE6A-205ENST00000617647 YIPF2Q9BWQ6 316 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 INTS9Q9NV88 658 aaKnown RBP8.14□□□□□ -1.11
PDE6A-205ENST00000617647 FANCAO15360 1455 aa8.14□□□□□ -1.11
PDE6A-205ENST00000617647 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.13□□□□□ -1.11
PDE6A-205ENST00000617647 CMA1P23946 247 aa8.13□□□□□ -1.11
PDE6A-205ENST00000617647 PPP2R2AP63151 447 aa8.13□□□□□ -1.11
PDE6A-205ENST00000617647 TRIM14Q14142 442 aa8.13□□□□□ -1.11
PDE6A-205ENST00000617647 POSTNQ15063 836 aa8.13□□□□□ -1.11
PDE6A-205ENST00000617647 GALNT17Q6IS24 598 aa8.13□□□□□ -1.11
PDE6A-205ENST00000617647 KANK3Q6NY19 840 aa8.13□□□□□ -1.11
PDE6A-205ENST00000617647 APLFQ8IW19 511 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms