RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 NBPF7P0C2Y1 421 aaPredicted RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 GPR158Q5T848 1215 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 PDXDC1Q6P996 788 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 PARD3BQ8TEW8 1205 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 MMTAG2Q9BU76 263 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 TSSK1BQ9BXA7 367 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 MRPL11Q9Y3B7 192 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 RNASEH1O60930 286 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 PARP1P09874 1014 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 PRPHP41219 470 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 MCM2P49736 904 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 PUM3Q15397 648 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 OOSP2Q86WS3 158 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 ATRIPQ8WXE1 791 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 LOC102724428A0A0B4J2F2 783 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 TRAPPC3O43617 180 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 NDUFS2O75306 463 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 MYCLP12524 364 aaPredicted RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 CCND2P30279 289 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 SIK1P57059 783 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 CDC42EP1Q00587 391 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 ARID5BQ14865 1188 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 BARGINQ6ZT62 677 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 C4BP0C0L5 1744 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 DUSP27Q5VZP5 1158 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 KIF12Q96FN5 646 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 DDX23Q9BUQ8 820 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 DONSONQ9NYP3 566 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 ARFGEF1Q9Y6D6 1849 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 HEG1Q9ULI3 1381 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 POTEB2H3BUK9 544 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 PPP2R5BQ15173 497 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 SASS6Q6UVJ0 657 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 CTU1Q7Z7A3 348 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 MCM9Q9NXL9 1143 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 GOLGA6L3A6NEY3 463 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 SUN1O94901 812 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 EPHA10Q5JZY3 1008 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 NACC1Q96RE7 527 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 CCP110O43303 1012 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 BMP15O95972 392 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 MAPK4P31152 587 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 NDUFV1P49821 464 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 CENPSQ8N2Z9 138 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 GPR101Q96P66 508 aaPredicted RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 KDM3AQ9Y4C1 1321 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 POLR2DO15514 142 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 MAGEC1O60732 1142 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 KRT83P78385 493 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 RAD51Q06609 339 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 PODNQ7Z5L7 613 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 ZNF557Q8N988 423 aaPredicted RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 CCDC191Q8NCU4 936 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 SH3TC2Q8TF17 1288 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 PANK3Q9H999 370 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 USP18Q9UMW8 372 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 ZMYM2Q9UBW7 1377 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 NAPAP54920 295 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 KANK3Q6NY19 840 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 ECE2O60344 883 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 SLC4A2P04920 1241 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 GCLCP48506 637 aaPredicted RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 RASEFQ8IZ41 740 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 SAMD11Q96NU1 681 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 WRNIP1Q96S55 665 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 EMILIN2Q9BXX0 1053 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 TRPV6Q9H1D0 765 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 PCDHB8Q9UN66 801 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 FNDC3AQ9Y2H6 1198 aaKnown RBP3.75□□□□□ -1.81
LPP-220ENST00000617246 SLC4A4Q9Y6R1 1079 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 NRXN1Q9ULB1 1477 aa3.75□□□□□ -1.81
LPP-220ENST00000617246 FOSL2P15408 326 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 PPARGP37231 505 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 SETQ01105 290 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 SLC12A7Q9Y666 1083 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 ADCY9O60503 1353 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 SPDYE16A6NNV3 312 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 EXOSC10Q01780 885 aaKnown RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 SPDYE2Q495Y8 402 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 STRCQ7RTU9 1775 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 FAM13AO94988 1023 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 DDX5P17844 614 aaKnown RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 FOSBP53539 338 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 STKLD1Q8NE28 680 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 ZNF397Q8NF99 534 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 FAM122AQ96E09 287 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 IRS2Q9Y4H2 1338 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 ABL1P00519 1130 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 TTLL5Q6EMB2 1281 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 TBC1D19Q8N5T2 526 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 BABAM1Q9NWV8 329 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 FOXD2O60548 495 aaPredicted RBP3.74□□□□□ -1.81
LPP-220ENST00000617246 TNNC2P02585 160 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 TBC1D5Q92609 795 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 KIFC2Q96AC6 838 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 GINM1Q9NU53 330 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 STIM2Q9P246 746 aa3.74□□□□□ -1.81
LPP-220ENST00000617246 COL3A1P02461 1466 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms