RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 PIGSQ96S52 555 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 GPCPD1Q9NPB8 672 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 PCDHA4Q9UN74 947 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 SUGT1Q9Y2Z0 365 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 STXBP3O00186 592 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 BMP6P22004 513 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 MDM2Q00987 491 aaPredicted RBP17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 FILIP1Q7Z7B0 1213 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 SCN9AQ15858 1988 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 IL17AQ16552 155 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 INF2Q27J81 1249 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 STYK1Q6J9G0 422 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 ZSCAN29Q8IWY8 852 aaPredicted RBP17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 MTMR4Q9NYA4 1195 aa17.73■□□□□ 0.43
SEMA3B-212ENST00000616701 ACTN4O43707 911 aaKnown RBP17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 SMC2O95347 1197 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 NAPAP54920 295 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 DACT2Q5SW24 774 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 ZNF579Q8NAF0 562 aaKnown RBP17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 PCDHA6Q9UN73 950 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 PCDHA8Q9Y5H6 950 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 CCDC194A0A1B0GVG4 234 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 ATP1A3P13637 1013 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 CALML3P27482 149 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 SHMT1P34896 483 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 NCAPHQ15003 741 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 PTPN21Q16825 1174 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 MAN1B1Q9UKM7 699 aa17.72■□□□□ 0.43
SEMA3B-212ENST00000616701 HHIPL2Q6UWX4 724 aa17.71■□□□□ 0.43
SEMA3B-212ENST00000616701 BARHL2Q9NY43 387 aa17.71■□□□□ 0.43
SEMA3B-212ENST00000616701 ATP2C1P98194 919 aaPredicted RBP17.71■□□□□ 0.43
SEMA3B-212ENST00000616701 SARM1Q6SZW1 724 aa17.71■□□□□ 0.43
SEMA3B-212ENST00000616701 CNKSR1Q969H4 720 aa17.71■□□□□ 0.43
SEMA3B-212ENST00000616701 IFNKQ9P0W0 207 aa17.71■□□□□ 0.43
SEMA3B-212ENST00000616701 DDTLA6NHG4 134 aaPredicted RBP17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 PDHBP11177 359 aa17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 CLGNO14967 610 aa17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 NOLC1Q14978 699 aaKnown RBP eCLIP17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 PPIP5K2O43314 1243 aa17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 HLA-DOAP06340 250 aa17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 STRIP1Q5VSL9 837 aa17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 TTBK2Q6IQ55 1244 aa17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 CACTINQ8WUQ7 758 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 SMARCE1Q969G3 411 aa17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 COA7Q96BR5 231 aa17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 RRP36Q96EU6 259 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 XPO4Q9C0E2 1151 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-212ENST00000616701 UTRNP46939 3433 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 SMCO2A6NFE2 343 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 TRMT44Q8IYL2 757 aaKnown RBP17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 TMEM60Q9H2L4 133 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 TDRD3Q9H7E2 651 aaKnown RBP17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 DNAJC18Q9H819 358 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 SH3GLB2Q9NR46 395 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 SEC63Q9UGP8 760 aaKnown RBP17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 FOCADQ5VW36 1801 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 LOC102724159A0A0B4J2E5 919 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 SLC16A2P36021 539 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 PWP2Q15269 919 aaKnown RBP17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 CCDC148Q8NFR7 591 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 C7orf43Q8WVR3 580 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 FERMT2Q96AC1 680 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 ZDHHC15Q96MV8 337 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 SPZ1Q9BXG8 430 aa17.69■□□□□ 0.42
SEMA3B-212ENST00000616701 YDJCA8MPS7 323 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 PP2D1A8MPX8 630 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 JAKMIP3Q5VZ66 844 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 KCTD1Q719H9 257 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 CNKSR2Q8WXI2 1034 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 BPIFA3Q9BQP9 254 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 BIN2Q9UBW5 565 aaPredicted RBP17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 FAM198AQ9UFP1 575 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 HOOK1Q9UJC3 728 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 M0R2N6 131 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 PSEN1P49768 467 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 NT5C2P49902 561 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 ZNF710Q8N1W2 664 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 MRFAP1L1Q96HT8 127 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 PLIN2Q99541 437 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 LZTS2Q9BRK4 669 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 HSD3B7Q9H2F3 369 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 BLZF1Q9H2G9 400 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 TMEM260Q9NX78 707 aa17.68■□□□□ 0.42
SEMA3B-212ENST00000616701 CCDC96Q2M329 555 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 SH3BP5LQ7L8J4 393 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 PAGE5Q96GU1 130 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 SMTNL1A8MU46 457 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 TTLL1O95922 423 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 BMP15O95972 392 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 FMR1Q06787 632 aaKnown RBP eCLIP17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 SMYD4Q8IYR2 804 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 FANCLQ9NW38 375 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 IGKV6D-41A0A0C4DH26 115 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 RAD17O75943 681 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 TRAPPC10P48553 1259 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 LETM2Q2VYF4 491 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 C4orf32Q8N8J7 132 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 KIAA1524Q8TCG1 905 aa17.67■□□□□ 0.42
SEMA3B-212ENST00000616701 DPF2Q92785 391 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms