RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 SEMA3AQ14563 771 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 COL28A1Q2UY09 1125 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 FAM182BQ5T319 152 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 UBAP2Q5T6F2 1119 aaKnown RBP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 FBXO42Q6P3S6 717 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZNF449Q6P9G9 518 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 TUBA3EQ6PEY2 450 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 DEF8Q6ZN54 512 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 CYFIP1Q7L576 1253 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 SAMD7Q7Z3H4 446 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 NAXDQ8IW45 347 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 SFTPA1Q8IWL2 248 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 RPUSD2Q8IZ73 545 aaKnown RBP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 SLC34A3Q8N130 599 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 CBARPQ8N350 705 aaPredicted RBP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 MAPK1IP1LQ8NDC0 245 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 CACTINQ8WUQ7 758 aaKnown RBP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 JARID2Q92833 1246 aaPredicted RBP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 FOXJ1Q92949 421 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 FAM46AQ96IP4 442 aaKnown RBP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 PLEKHG4BQ96PX9 1271 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 TMPRSS13Q9BYE2 586 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 MKRN2Q9H000 416 aaKnown RBP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 MRPL18Q9H0U6 180 aaKnown RBP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 DEF6Q9H4E7 631 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 PRDM13Q9H4Q3 707 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 GORASP2Q9H8Y8 452 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 MYOZ1Q9NP98 299 aaPredicted RBP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 LATS2Q9NRM7 1088 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 ANAPC11Q9NYG5 84 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 CAMSAP3Q9P1Y5 1249 aaPredicted RBP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 Q9UF83 564 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 TRPS1Q9UHF7 1281 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 MCM8Q9UJA3 840 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 RPH3ALQ9UNE2 315 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZBTB1Q9Y2K1 713 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 HIF3AQ9Y2N7 669 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 DYRK1BQ9Y463 629 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 COL27A1Q8IZC6 1860 aaPredicted RBP-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 DNAH3Q8TD57 4116 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 DCHS2Q6V1P9 2916 aa-0.7□□□□□ -2.52
SOX2-OT-236ENST00000616401 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 NCOR1O75376 2440 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 LOC100289279A0A1B0GTE1 492 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 FAM95CA0A1B0GW59 222 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 A0A1W2PPR1 153 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 FAM221AA4D161 298 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 WDR91A4D1P6 747 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 IFITM10A6NMD0 228 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 USP17L10C9JJH3 530 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 HRKO00198 91 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 FFAR3O14843 346 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 N4BP3O15049 544 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 TP73O15350 636 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 NR1I2O75469 434 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 DEDDO75618 318 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 OAZ2O95190 189 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 WISP3O95389 354 aaPredicted RBP-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 NFICP08651 508 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 USP17L8P0C7I0 530 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 PRKCSHP14314 528 aaPredicted RBP-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 MMP9P14780 707 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 WT1P19544 449 aaPredicted RBP-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 FASP25445 335 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 CDC25CP30307 473 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 THBS2P35442 1172 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 GDNFP39905 211 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 AFF1P51825 1210 aaKnown RBP-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 NANOS2P60321 138 aaKnown RBP-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 ERVK11-1P61568 191 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 IRX6P78412 446 aaPredicted RBP-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 CYP27A1Q02318 531 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 ADAM15Q13444 863 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZNF169Q14929 603 aaPredicted RBP-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 KRT31Q15323 416 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 SURF1Q15526 300 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 TWIST1Q15672 202 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 VMACQ2NL98 169 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 NRN1LQ496H8 165 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 ANGEL2Q5VTE6 544 aaKnown RBP-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 PRPF38BQ5VTL8 546 aaKnown RBP-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 IER5Q5VY09 327 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZFAND6Q6FIF0 208 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 ANKRD26P1Q6NSI1 321 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 CNKSR3Q6P9H4 555 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 USP17L6PQ6QN14 398 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 SPATA8Q6RVD6 105 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 SEZ6L2Q6UXD5 910 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 C19orf35Q6ZS72 473 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 ERICH6Q7L0X2 663 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 FAM129CQ86XR2 697 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 FAM20CQ8IXL6 584 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 TMEFF1Q8IYR6 380 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 H1FOOQ8IZA3 346 aaPredicted RBP-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 AMER3Q8N944 861 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZNF454Q8N9F8 522 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 BANK1Q8NDB2 785 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 TRIM58Q8NG06 486 aa-0.71□□□□□ -2.52
SOX2-OT-236ENST00000616401 RNF217Q8TC41 542 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms