RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 PPP2R5AQ15172 486 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 ADGRL2O95490 1459 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 SMTNP53814 917 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 ST5P78524 1137 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 SPATA5Q8NB90 893 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 PLEKHF1Q96S99 279 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 LZTS2Q9BRK4 669 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 STK24Q9Y6E0 443 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 MAP3K21Q5TCX8 1036 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 ARMC9Q7Z3E5 817 aa20.74■□□□□ 0.91
SPAST-203ENST00000615843 LARSQ9P2J5 1176 aaKnown RBP20.74■□□□□ 0.91
SPAST-203ENST00000615843 LARGE1O95461 756 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 H2AFZP0C0S5 128 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 H2AFVQ71UI9 128 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 ADAT2Q7Z6V5 191 aaKnown RBP20.73■□□□□ 0.91
SPAST-203ENST00000615843 TEX11Q8IYF3 940 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 MYCT1Q8N699 235 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 FANCBQ8NB91 859 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 RABGAP1Q9Y3P9 1069 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 ARHGEF35A5YM69 484 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 NEURL1BA8MQ27 555 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 KIFC2Q96AC6 838 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 BCAP29Q9UHQ4 241 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 MORC2Q9Y6X9 1032 aaPredicted RBP20.73■□□□□ 0.91
SPAST-203ENST00000615843 ANKRD65E5RJM6 399 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 THAP12O43422 761 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 ADAMTS2O95450 1211 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 GCP02774 474 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 CFAP61Q8NHU2 1237 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 TUBGCP2Q9BSJ2 902 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 PKD2L1Q9P0L9 805 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 ADCY8P40145 1251 aa20.73■□□□□ 0.91
SPAST-203ENST00000615843 CC2D1AQ6P1N0 951 aaPredicted RBP20.73■□□□□ 0.91
SPAST-203ENST00000615843 FAM170AA1A519 330 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 B4DLN1 442 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 RASA3Q14644 834 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 REXO1Q8N1G1 1221 aaKnown RBP20.72■□□□□ 0.91
SPAST-203ENST00000615843 USH1CQ9Y6N9 552 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 DCUN1D2Q6PH85 259 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 NT5C3AQ9H0P0 336 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 EXOC7Q9UPT5 735 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 PCDHB13Q9Y5F0 798 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 COBLO75128 1261 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 FGAP02671 866 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 TRPC3Q13507 836 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 GEN1Q17RS7 908 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
SPAST-203ENST00000615843 BLIDQ8IZY5 108 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.72■□□□□ 0.91
SPAST-203ENST00000615843 EIF3CLB5ME19 914 aaKnown RBP20.72■□□□□ 0.91
SPAST-203ENST00000615843 RESTQ13127 1097 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 ALS2CLQ60I27 953 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 GRK7Q8WTQ7 553 aa20.72■□□□□ 0.91
SPAST-203ENST00000615843 EIF3CQ99613 913 aaKnown RBP20.72■□□□□ 0.91
SPAST-203ENST00000615843 PPARAQ07869 468 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 NAA30Q147X3 362 aaPredicted RBP20.71■□□□□ 0.91
SPAST-203ENST00000615843 ENOX1Q8TC92 643 aaKnown RBP20.71■□□□□ 0.91
SPAST-203ENST00000615843 EPSTI1Q96J88 318 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 CNOT6LQ96LI5 555 aaKnown RBP20.71■□□□□ 0.91
SPAST-203ENST00000615843 MPHOSPH6Q99547 160 aaKnown RBP20.71■□□□□ 0.91
SPAST-203ENST00000615843 GUCY2CP25092 1073 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 GSDMBQ8TAX9 411 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 NYXQ9GZU5 481 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 MAN1B1Q9UKM7 699 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 KLHL29Q96CT2 875 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 PANX2Q96RD6 677 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 PDE8AO60658 829 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 CTNND1O60716 968 aaKnown RBP20.71■□□□□ 0.91
SPAST-203ENST00000615843 CYP21A2P08686 494 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 EEF1GP26641 437 aaKnown RBP20.71■□□□□ 0.91
SPAST-203ENST00000615843 VPS41P49754 854 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 CCDC89Q8N998 374 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 ZNF608Q9ULD9 1512 aaPredicted RBP20.71■□□□□ 0.91
SPAST-203ENST00000615843 COG7P83436 770 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 NAA35Q5VZE5 725 aa20.71■□□□□ 0.91
SPAST-203ENST00000615843 MAST1Q9Y2H9 1570 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 KDRP35968 1356 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 NR1D1P20393 614 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 PTGDRQ13258 359 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 ARMCX3Q9UH62 379 aaPredicted RBP20.7■□□□□ 0.9
SPAST-203ENST00000615843 SIRT2Q8IXJ6 389 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 SAMSN1Q9NSI8 373 aaKnown RBP20.7■□□□□ 0.9
SPAST-203ENST00000615843 TYW1Q9NV66 732 aaKnown RBP20.7■□□□□ 0.9
SPAST-203ENST00000615843 AATFQ9NY61 560 aaKnown RBP eCLIP20.7■□□□□ 0.9
SPAST-203ENST00000615843 ARHGEF10O15013 1369 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 HARSP12081 509 aaKnown RBP20.7■□□□□ 0.9
SPAST-203ENST00000615843 ATP1A3P13637 1013 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 IL2RBP14784 551 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 EIF6P56537 245 aaKnown RBP20.7■□□□□ 0.9
SPAST-203ENST00000615843 RUNDC3BQ96NL0 473 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 KDM5AP29375 1690 aaKnown RBP20.7■□□□□ 0.9
SPAST-203ENST00000615843 HIBCHQ6NVY1 386 aaPredicted RBP20.7■□□□□ 0.9
SPAST-203ENST00000615843 FNBP4Q8N3X1 1017 aaPredicted RBP20.7■□□□□ 0.9
SPAST-203ENST00000615843 RETREG2Q8NC44 543 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 LRRC8CQ8TDW0 803 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 SLC39A2Q9NP94 309 aa20.7■□□□□ 0.9
SPAST-203ENST00000615843 BACH1O14867 736 aa20.69■□□□□ 0.9
SPAST-203ENST00000615843 CTAGE3PQ8IX95 158 aa20.69■□□□□ 0.9
SPAST-203ENST00000615843 EEF2KMTQ96G04 330 aa20.69■□□□□ 0.9
SPAST-203ENST00000615843 SMYD4Q8IYR2 804 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms