RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CSF1RP07333 972 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 GNG11P61952 73 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 VWA3BQ502W6 1294 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 SMIM5Q71RC9 77 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 JADE2Q9NQC1 790 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 NRBP2Q9NSY0 501 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 SYNRGQ9UMZ2 1314 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 TACC1O75410 805 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 SKILP12757 684 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 TECP42680 631 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 TBC1D8BQ0IIM8 1120 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 LEKR1Q6ZMV7 388 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 CCDC186Q7Z3E2 898 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 CNGA4Q8IV77 575 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 ZBTB8OSQ8IWT0 167 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 KIFAP3Q92845 792 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 CDHR1Q96JP9 859 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 MTMR6Q9Y217 621 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 GOLGA6L10A0A0M3HER8 536 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 GH2P01242 217 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 IFNAR1P17181 557 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 SLC8A3P57103 927 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 EZH2Q15910 746 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 DCAF4Q8WV16 495 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 C16orf45Q96MC5 204 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 EXOC3O60645 756 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 CACNB3P54284 484 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 NLRP12P59046 1061 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 RAPGEF1Q13905 1077 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 TRIM14Q14142 442 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 FAM47CQ5HY64 1035 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 GPBP1Q86WP2 473 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 PIGSQ96S52 555 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 CRACR2AQ9BSW2 395 aa10.53□□□□□ -0.72
CLTCL1-208ENST00000615606 POTEB2H3BUK9 544 aa10.52□□□□□ -0.72
CLTCL1-208ENST00000615606 PTGS1P23219 599 aa10.52□□□□□ -0.72
CLTCL1-208ENST00000615606 SLC16A2P36021 539 aa10.52□□□□□ -0.72
CLTCL1-208ENST00000615606 LONP1P36776 959 aaKnown RBP10.52□□□□□ -0.72
CLTCL1-208ENST00000615606 KIF5AQ12840 1032 aa10.52□□□□□ -0.72
CLTCL1-208ENST00000615606 ZRSR2Q15696 482 aaKnown RBP10.52□□□□□ -0.72
CLTCL1-208ENST00000615606 STRIP1Q5VSL9 837 aa10.52□□□□□ -0.72
CLTCL1-208ENST00000615606 PCDHB13Q9Y5F0 798 aa10.52□□□□□ -0.72
CLTCL1-208ENST00000615606 STX10O60499 249 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 NECTIN1Q15223 517 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 XKR9Q5GH70 373 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 MEGF6O75095 1541 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 UTYO14607 1347 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 PRPF3O43395 683 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 KRT86O43790 486 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 CCDC175P0C221 793 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 ATG9AQ7Z3C6 839 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 LRRC45Q96CN5 670 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 USP28Q96RU2 1077 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 ALX1Q15699 326 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 USP17L2Q6R6M4 530 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 NSUN7Q8NE18 718 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 MTA3Q9BTC8 594 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 SELENOOQ9BVL4 669 aa10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 DCP1AQ9NPI6 582 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-208ENST00000615606 DTNBO60941 627 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 TMOD1P28289 359 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 CKAP4Q07065 602 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 TMX1Q9H3N1 280 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 SERTAD1Q9UHV2 236 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 MAPK8IP1Q9UQF2 711 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 USP17L5A8MUK1 530 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 FAM193AP78312 1265 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 RAD51AP2Q09MP3 1159 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 TAX1BP1Q86VP1 789 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 METTL13Q8N6R0 699 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 ATP6V0A1Q93050 837 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 WRNIP1Q96S55 665 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 WDR11Q9BZH6 1224 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 CDC37Q16543 378 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 FAM102BQ5T8I3 360 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 AP5M1Q9H0R1 490 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 MAGEF1Q9HAY2 307 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 PNMA6FA0A0J9YX94 578 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 RRP9O43818 475 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 TUBB4AP04350 444 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 KRT5P13647 590 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 PFKFB1P16118 471 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 CMA1P23946 247 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 CCND2P30279 289 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 LRCH2Q5VUJ6 765 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 INTS5Q6P9B9 1019 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 JPH2Q9BR39 696 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 TBC1D7Q9P0N9 293 aa10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 LARSQ9P2J5 1176 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-208ENST00000615606 ARHGEF28Q8N1W1 1705 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 PTGDRQ13258 359 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 UTP14CQ5TAP6 766 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 TMCO3Q6UWJ1 677 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 GOLGA5Q8TBA6 731 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 CYP2D6P10635 497 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 PDIA6Q15084 440 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 KIAA0753Q2KHM9 967 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 NELFCDQ8IXH7 590 aa10.5□□□□□ -0.73
CLTCL1-208ENST00000615606 RGS22Q8NE09 1264 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms