RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 IDI2Q9BXS1 227 aa21.8■■□□□ 1.08
MMP28-204ENST00000615136 PDCL3Q9H2J4 239 aa21.8■■□□□ 1.08
MMP28-204ENST00000615136 SERPINA10Q9UK55 444 aa21.8■■□□□ 1.08
MMP28-204ENST00000615136 MPHOSPH10O00566 681 aaKnown RBP21.8■■□□□ 1.08
MMP28-204ENST00000615136 ATP2C1P98194 919 aaPredicted RBP21.8■■□□□ 1.08
MMP28-204ENST00000615136 PRMT6Q96LA8 375 aaPredicted RBP21.8■■□□□ 1.08
MMP28-204ENST00000615136 MAP7D2Q96T17 732 aa21.8■■□□□ 1.08
MMP28-204ENST00000615136 MORC2Q9Y6X9 1032 aaPredicted RBP21.8■■□□□ 1.08
MMP28-204ENST00000615136 IKBKBO14920 756 aa21.79■■□□□ 1.08
MMP28-204ENST00000615136 ELOA2Q8IYF1 753 aaPredicted RBP21.79■■□□□ 1.08
MMP28-204ENST00000615136 EHD4Q9H223 541 aa21.79■■□□□ 1.08
MMP28-204ENST00000615136 ZNF277Q9NRM2 450 aaPredicted RBP21.79■■□□□ 1.08
MMP28-204ENST00000615136 PCDHA5Q9Y5H7 936 aa21.79■■□□□ 1.08
MMP28-204ENST00000615136 MYO3BQ8WXR4 1341 aa21.79■■□□□ 1.08
MMP28-204ENST00000615136 VWA3AA6NCI4 1184 aa21.79■■□□□ 1.08
MMP28-204ENST00000615136 ACTN4O43707 911 aaKnown RBP21.79■■□□□ 1.08
MMP28-204ENST00000615136 TTLL1O95922 423 aa21.79■■□□□ 1.08
MMP28-204ENST00000615136 SNHG28P0DPA3 235 aa21.79■■□□□ 1.08
MMP28-204ENST00000615136 RBM10P98175 930 aaKnown RBP21.79■■□□□ 1.08
MMP28-204ENST00000615136 CFAP100Q494V2 611 aa21.79■■□□□ 1.08
MMP28-204ENST00000615136 SUPT20HQ8NEM7 779 aa21.79■■□□□ 1.08
MMP28-204ENST00000615136 SYMPKQ92797 1274 aaKnown RBP21.79■■□□□ 1.08
MMP28-204ENST00000615136 SMTNL1A8MU46 457 aa21.78■■□□□ 1.08
MMP28-204ENST00000615136 TPM4P67936 248 aa21.78■■□□□ 1.08
MMP28-204ENST00000615136 DAGLBQ8NCG7 672 aa21.78■■□□□ 1.08
MMP28-204ENST00000615136 RIOX1Q9H6W3 641 aa21.78■■□□□ 1.08
MMP28-204ENST00000615136 GPCPD1Q9NPB8 672 aa21.78■■□□□ 1.08
MMP28-204ENST00000615136 IMPACTQ9P2X3 320 aa21.78■■□□□ 1.08
MMP28-204ENST00000615136 MYH4Q9Y623 1939 aa21.77■■□□□ 1.08
MMP28-204ENST00000615136 RAD17O75943 681 aa21.77■■□□□ 1.08
MMP28-204ENST00000615136 BMP6P22004 513 aa21.77■■□□□ 1.08
MMP28-204ENST00000615136 TRAPPC10P48553 1259 aa21.77■■□□□ 1.08
MMP28-204ENST00000615136 GSDMDP57764 484 aa21.77■■□□□ 1.08
MMP28-204ENST00000615136 ATP2B2Q01814 1243 aa21.77■■□□□ 1.08
MMP28-204ENST00000615136 CCDC93Q567U6 631 aa21.77■■□□□ 1.08
MMP28-204ENST00000615136 ZSCAN29Q8IWY8 852 aaPredicted RBP21.77■■□□□ 1.08
MMP28-204ENST00000615136 C4orf32Q8N8J7 132 aa21.77■■□□□ 1.08
MMP28-204ENST00000615136 RRP36Q96EU6 259 aaKnown RBP21.77■■□□□ 1.08
MMP28-204ENST00000615136 PSME4Q14997 1843 aa21.77■■□□□ 1.08
MMP28-204ENST00000615136 NAPAP54920 295 aa21.77■■□□□ 1.07
MMP28-204ENST00000615136 CCZ1BP86790 482 aa21.77■■□□□ 1.07
MMP28-204ENST00000615136 CCZ1P86791 482 aaPredicted RBP21.77■■□□□ 1.07
MMP28-204ENST00000615136 ARID5BQ14865 1188 aa21.77■■□□□ 1.07
MMP28-204ENST00000615136 INF2Q27J81 1249 aa21.77■■□□□ 1.07
MMP28-204ENST00000615136 TTBK2Q6IQ55 1244 aa21.77■■□□□ 1.07
MMP28-204ENST00000615136 CCDC148Q8NFR7 591 aa21.77■■□□□ 1.07
MMP28-204ENST00000615136 ZMYND12Q9H0C1 365 aa21.77■■□□□ 1.07
MMP28-204ENST00000615136 MTERF4Q7Z6M4 381 aaKnown RBP21.76■■□□□ 1.07
MMP28-204ENST00000615136 FERMT2Q96AC1 680 aa21.76■■□□□ 1.07
MMP28-204ENST00000615136 BMP15O95972 392 aa21.75■■□□□ 1.07
MMP28-204ENST00000615136 POSTNQ15063 836 aa21.75■■□□□ 1.07
MMP28-204ENST00000615136 FILIP1Q7Z7B0 1213 aa21.75■■□□□ 1.07
MMP28-204ENST00000615136 DHX58Q96C10 678 aa21.75■■□□□ 1.07
MMP28-204ENST00000615136 DHX36Q9H2U1 1008 aaKnown RBP21.75■■□□□ 1.07
MMP28-204ENST00000615136 PI4KBQ9UBF8 816 aa21.75■■□□□ 1.07
MMP28-204ENST00000615136 CCDC194A0A1B0GVG4 234 aa21.75■■□□□ 1.07
MMP28-204ENST00000615136 SMCO2A6NFE2 343 aa21.75■■□□□ 1.07
MMP28-204ENST00000615136 PSMD14O00487 310 aa21.75■■□□□ 1.07
MMP28-204ENST00000615136 ZBTB7AO95365 584 aa21.75■■□□□ 1.07
MMP28-204ENST00000615136 SMARCA1P28370 1054 aa21.75■■□□□ 1.07
MMP28-204ENST00000615136 PSMD1Q99460 953 aa21.75■■□□□ 1.07
MMP28-204ENST00000615136 XPO4Q9C0E2 1151 aaKnown RBP21.75■■□□□ 1.07
MMP28-204ENST00000615136 ZBTB12Q9Y330 459 aaPredicted RBP21.75■■□□□ 1.07
MMP28-204ENST00000615136 JAG1P78504 1218 aa21.74■■□□□ 1.07
MMP28-204ENST00000615136 ZNF543Q08ER8 600 aa21.74■■□□□ 1.07
MMP28-204ENST00000615136 ASPRV1Q53RT3 343 aa21.74■■□□□ 1.07
MMP28-204ENST00000615136 RTKN2Q8IZC4 609 aa21.74■■□□□ 1.07
MMP28-204ENST00000615136 LARGE2Q8N3Y3 721 aa21.74■■□□□ 1.07
MMP28-204ENST00000615136 COA7Q96BR5 231 aa21.74■■□□□ 1.07
MMP28-204ENST00000615136 C16orf45Q96MC5 204 aaPredicted RBP21.74■■□□□ 1.07
MMP28-204ENST00000615136 HSD3B7Q9H2F3 369 aa21.74■■□□□ 1.07
MMP28-204ENST00000615136 TMEM60Q9H2L4 133 aa21.74■■□□□ 1.07
MMP28-204ENST00000615136 IFNKQ9P0W0 207 aa21.74■■□□□ 1.07
MMP28-204ENST00000615136 SEC63Q9UGP8 760 aaKnown RBP21.74■■□□□ 1.07
MMP28-204ENST00000615136 RIOK3O14730 519 aaKnown RBP21.73■■□□□ 1.07
MMP28-204ENST00000615136 SKILP12757 684 aa21.73■■□□□ 1.07
MMP28-204ENST00000615136 CASP1P29466 404 aa21.73■■□□□ 1.07
MMP28-204ENST00000615136 SLC16A2P36021 539 aa21.73■■□□□ 1.07
MMP28-204ENST00000615136 KCTD1Q719H9 257 aa21.73■■□□□ 1.07
MMP28-204ENST00000615136 SIAH1Q8IUQ4 282 aa21.73■■□□□ 1.07
MMP28-204ENST00000615136 KCND1Q9NSA2 647 aa21.73■■□□□ 1.07
MMP28-204ENST00000615136 KIF13BQ9NQT8 1826 aa21.73■■□□□ 1.07
MMP28-204ENST00000615136 RRP1BQ14684 758 aaKnown RBP21.73■■□□□ 1.07
MMP28-204ENST00000615136 CERKLQ49MI3 558 aaPredicted RBP21.73■■□□□ 1.07
MMP28-204ENST00000615136 GALNT17Q6IS24 598 aa21.73■■□□□ 1.07
MMP28-204ENST00000615136 RSBN1LQ6PCB5 846 aaPredicted RBP21.73■■□□□ 1.07
MMP28-204ENST00000615136 JMJD4Q9H9V9 463 aa21.73■■□□□ 1.07
MMP28-204ENST00000615136 MAN1B1Q9UKM7 699 aa21.73■■□□□ 1.07
MMP28-204ENST00000615136 PPP1R11O60927 126 aaPredicted RBP21.72■■□□□ 1.07
MMP28-204ENST00000615136 SMC2O95347 1197 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 GDF11O95390 407 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 EEF2P13639 858 aaKnown RBP21.72■■□□□ 1.07
MMP28-204ENST00000615136 CDC25AP30304 524 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 MYL5Q02045 173 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 SEPT2Q15019 361 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 TATDN1Q6P1N9 297 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 ADGRF4Q8IZF3 695 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 SLC16A10Q8TF71 515 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 CCDC17Q96LX7 622 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 GMLQ99445 158 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms