RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	OAZ1	P54368	228 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	ANO1	Q5XXA6	986 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	NEDD1	Q8NHV4	660 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	CEP95	Q96GE4	821 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	SLC38A10	Q9HBR0	1119 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	MTMR10	Q9NXD2	777 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	PRKAG2	Q9UGJ0	569 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	FEM1B	Q9UK73	627 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	SYNGAP1	Q96PV0	1343 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	SALL3	Q9BXA9	1300 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	LTBP2	Q14767	1821 aa		13.27	□□□□□ -0.29
CBWD1-222	ENST00000613508	POTEB2	H3BUK9	544 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	RAD21	O60216	631 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	ZBED4	O75132	1171 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	FDX1	P10109	184 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	AKR1A1	P14550	325 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	TAL1	P17542	331 aa	Predicted RBP	13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	PDE4B	Q07343	736 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	EYS	Q5T1H1	3165 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	SNRNP48	Q6IEG0	339 aa	Known RBP	13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	RNF180	Q86T96	592 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	TICAM2	Q86XR7	235 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	SEC62	Q99442	399 aa	Known RBP	13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	CNPY2	Q9Y2B0	182 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	ATP11B	Q9Y2G3	1177 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	STXBP5L	Q9Y2K9	1186 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	RIPK3	Q9Y572	518 aa		13.26	□□□□□ -0.29
CBWD1-222	ENST00000613508	PLXNA1	Q9UIW2	1896 aa		13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	ADAMTS4	O75173	837 aa		13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	PRDM1	O75626	825 aa		13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	SNAI1	O95863	264 aa	Predicted RBP	13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	SLC3A2	P08195	630 aa	Known RBP	13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	MX1	P20591	662 aa		13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	TRIM60	Q495X7	471 aa		13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	PPP4R3B	Q5MIZ7	849 aa		13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	STK11IP	Q8N1F8	1099 aa		13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	CHST13	Q8NET6	341 aa		13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	GMCL1	Q96IK5	515 aa		13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	TSEN34	Q9BSV6	310 aa	Known RBP	13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	PDLIM7	Q9NR12	457 aa		13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	FBXO40	Q9UH90	709 aa		13.25	□□□□□ -0.29
CBWD1-222	ENST00000613508	CDH23	Q9H251	3354 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	FOXP2	O15409	715 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	PLA2G6	O60733	806 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	PGK1	P00558	417 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	TSPY3	P0CV98	308 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	TSPY8	P0CW00	308 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	PPARA	Q07869	468 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508		Q7L0L9	218 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	FERMT2	Q96AC1	680 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	KIFC2	Q96AC6	838 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	DDX11	Q96FC9	970 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	FSD1	Q9BTV5	496 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	NAPB	Q9H115	298 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	TACC3	Q9Y6A5	838 aa		13.24	□□□□□ -0.29
CBWD1-222	ENST00000613508	SMCHD1	A6NHR9	2005 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	MYH4	Q9Y623	1939 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508		A0A1W2PQ45	241 aa	Predicted RBP	13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508		A0A1W2PQY0	241 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	TRIM43B	A6NCK2	446 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	KIAA0355	O15063	1070 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	DUSP11	O75319	330 aa	Known RBP	13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	BMP3	P12645	472 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	CST5	P28325	142 aa	Predicted RBP	13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	NOV	P48745	357 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	TFAP4	Q01664	338 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	TLE2	Q04725	743 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	SLFN13	Q68D06	897 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	ANKRD33	Q7Z3H0	272 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	LRRC47	Q8N1G4	583 aa	Known RBP	13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	SLC17A8	Q8NDX2	589 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	KLHDC9	Q8NEP7	349 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	FGD4	Q96M96	766 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	TOX2	Q96NM4	488 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	RAVER2	Q9HCJ3	691 aa	Known RBP	13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	ANAPC4	Q9UJX5	808 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	FAM184B	Q9ULE4	1060 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	CUL9	Q8IWT3	2517 aa		13.23	□□□□□ -0.29
CBWD1-222	ENST00000613508	SYNRG	Q9UMZ2	1314 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	MOXD2P	A6NHM9	499 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	MYCN	P04198	464 aa	Predicted RBP	13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	FGR	P09769	529 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	STAT2	P52630	851 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	ACLY	P53396	1101 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	RRP1	P56182	461 aa	Known RBP	13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	ALX1	Q15699	326 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	FAM160B2	Q86V87	743 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	CPXCR1	Q8N123	301 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	ANKRD35	Q8N283	1001 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	CHURC1	Q8WUH1	139 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	EVI5L	Q96CN4	794 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	ABHD16B	Q9H3Z7	469 aa		13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.22	□□□□□ -0.29
CBWD1-222	ENST00000613508	ZNF536	O15090	1300 aa		13.21	□□□□□ -0.29
CBWD1-222	ENST00000613508	PRUNE2	Q8WUY3	3088 aa		13.21	□□□□□ -0.29
CBWD1-222	ENST00000613508	CLTB	P09497	229 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms