RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 STX3Q13277 289 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 ADRM1Q16186 407 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 KCTD16Q68DU8 428 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 CWF19L1Q69YN2 538 aaKnown RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 PRPF31Q8WWY3 499 aaKnown RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 RUNDC3BQ96NL0 473 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 DMAP1Q9NPF5 467 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 NUTM2BA6NNL0 878 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 NUTM2EB1AL46 878 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 ADCY3O60266 1144 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 ILF2Q12905 390 aaKnown RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 CYB5D1Q6P9G0 228 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 DRAXINQ8NBI3 349 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 EVI5LQ96CN4 794 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 ZBTB40Q9NUA8 1239 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 MYO5BQ9ULV0 1848 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 RAP1GDS1P52306 607 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 KRR1Q13601 381 aaKnown RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.43□□□□□ -1.541e-9■■■■■ 56.2
VPS13D-213ENST00000613099 CHMP6Q96FZ7 201 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 HAUS2Q9NVX0 235 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 CHMP2BQ9UQN3 213 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 ARHGEF5Q12774 1597 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 MAGEA13PA6NCF6 341 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 FAM107AO95990 144 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 RPS6KA1Q15418 735 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 FRA10AC1Q70Z53 315 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 AFAP1Q8N556 730 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 MMADHCQ9H3L0 296 aaPredicted RBP5.43□□□□□ -1.54
VPS13D-213ENST00000613099 ECT2Q9H8V3 914 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 PRELID1Q9Y255 219 aa5.43□□□□□ -1.54
VPS13D-213ENST00000613099 TBKBP1A7MCY6 615 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 KRT6AP02538 564 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 KRT6BP04259 564 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 DDR1Q08345 913 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 PDXDC1Q6P996 788 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 CTAGE3PQ8IX95 158 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 SYCE1Q8N0S2 351 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 FERMT1Q9BQL6 677 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 KAT14Q9H8E8 782 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 ATP11BQ9Y2G3 1177 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 FANCAO15360 1455 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 SUPT3HO75486 399 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 AGGF1Q8N302 714 aaeCLIP5.42□□□□□ -1.54
VPS13D-213ENST00000613099 RAPGEF4Q8WZA2 1011 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 ZWINTO95229 277 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 GUCY2FP51841 1108 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 ZKSCAN4Q969J2 545 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-213ENST00000613099 ATXN2Q99700 1313 aaKnown RBP5.42□□□□□ -1.54
VPS13D-213ENST00000613099 INO80Q9ULG1 1556 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-213ENST00000613099 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-213ENST00000613099 LONP1P36776 959 aaKnown RBP5.42□□□□□ -1.54
VPS13D-213ENST00000613099 KRT6CP48668 564 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 ITIH3Q06033 890 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 USH1GQ495M9 461 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 TRIM60Q495X7 471 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 MAST1Q9Y2H9 1570 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 PDE5AO76074 875 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 LSP1P33241 339 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 PLA2G4DQ86XP0 818 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 STRN4Q9NRL3 753 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 DLGAP2Q9P1A6 1054 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 LSM1O15116 133 aaKnown RBP5.42□□□□□ -1.54
VPS13D-213ENST00000613099 RSPH3Q86UC2 560 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 COG1Q8WTW3 980 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.42□□□□□ -1.541e-6■■□□□ 12.6
VPS13D-213ENST00000613099 LRRC9Q6ZRR7 1453 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 CBFA2T3O75081 653 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 TBC1D5Q92609 795 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 CAPN1P07384 714 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 DAB2IPQ5VWQ8 1189 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 POTEEQ6S8J3 1075 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 BTN2A1Q7KYR7 527 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 JPH4Q96JJ6 628 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 MTHFSP49914 203 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 KCNH5Q8NCM2 988 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 EDEM3Q9BZQ6 932 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 FAM129AQ9BZQ8 928 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 PRDM16Q9HAZ2 1276 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 ATAD3AQ9NVI7 634 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 GSTA1P08263 222 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 SERPINB6P35237 376 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 AMPHP49418 695 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 TERB1Q8NA31 727 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 AIDAQ96BJ3 306 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 DNAJC5Q9H3Z4 198 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 TRAF3IP3Q9Y228 551 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 SAMD9Q5K651 1589 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 DCTN3O75935 186 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 ZNF202O95125 648 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 CDC37Q16543 378 aaPredicted RBP5.42□□□□□ -1.54
VPS13D-213ENST00000613099 CCDC28BQ9BUN5 200 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 DCTPP1Q9H773 170 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 EPS15L1Q9UBC2 864 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 PFKFB2O60825 505 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 DDI1Q8WTU0 396 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 SERPINB3P29508 390 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 KCTD17Q8N5Z5 321 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 TRIM63Q969Q1 353 aa5.42□□□□□ -1.54
VPS13D-213ENST00000613099 NACAP1Q9BZK3 213 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms