RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 HIPK3Q9H422 1215 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 SPC25Q9HBM1 224 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 MRS2Q9HD23 443 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 PARP14Q460N5 1801 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 WDFY4Q6ZS81 3184 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 CYP2E1P05181 493 aaPredicted RBP12.54□□□□□ -0.4
SSX3-204ENST00000612497 ATP2A2P16615 1042 aaKnown RBP12.54□□□□□ -0.4
SSX3-204ENST00000612497 CST5P28325 142 aaPredicted RBP12.54□□□□□ -0.4
SSX3-204ENST00000612497 PLCD1P51178 756 aa12.54□□□□□ -0.4
SSX3-204ENST00000612497 CCL23P55773 120 aa12.54□□□□□ -0.4
SSX3-204ENST00000612497 TMEM67Q5HYA8 995 aa12.54□□□□□ -0.4
SSX3-204ENST00000612497 RIOX2Q8IUF8 465 aa12.54□□□□□ -0.4
SSX3-204ENST00000612497 CD320Q9NPF0 282 aa12.54□□□□□ -0.4
SSX3-204ENST00000612497 UMODL1Q5DID0 1318 aa12.54□□□□□ -0.4
SSX3-204ENST00000612497 MCM3APO60318 1980 aa12.54□□□□□ -0.4
SSX3-204ENST00000612497 SNAI1O95863 264 aaPredicted RBP12.53□□□□□ -0.4
SSX3-204ENST00000612497 CD4P01730 458 aa12.53□□□□□ -0.4
SSX3-204ENST00000612497 POLR3DP05423 398 aaPredicted RBP12.53□□□□□ -0.4
SSX3-204ENST00000612497 CA3P07451 260 aa12.53□□□□□ -0.4
SSX3-204ENST00000612497 NHLH1Q02575 133 aa12.53□□□□□ -0.4
SSX3-204ENST00000612497 G3BP1Q13283 466 aaKnown RBP eCLIP12.53□□□□□ -0.4
SSX3-204ENST00000612497 CCDC158Q5M9N0 1113 aa12.53□□□□□ -0.4
SSX3-204ENST00000612497 CERS3Q8IU89 383 aa12.53□□□□□ -0.4
SSX3-204ENST00000612497 RPUSD2Q8IZ73 545 aaKnown RBP12.53□□□□□ -0.4
SSX3-204ENST00000612497 MEIS3Q99687 375 aa12.53□□□□□ -0.4
SSX3-204ENST00000612497 PIH1D3Q9NQM4 214 aaKnown RBP12.53□□□□□ -0.4
SSX3-204ENST00000612497 EPOPA6NHQ4 379 aa12.52□□□□□ -0.41
SSX3-204ENST00000612497 STAT3P40763 770 aa12.52□□□□□ -0.41
SSX3-204ENST00000612497 ZAP70P43403 619 aa12.52□□□□□ -0.41
SSX3-204ENST00000612497 CSPP1Q1MSJ5 1256 aa12.52□□□□□ -0.41
SSX3-204ENST00000612497 MSL3Q8N5Y2 521 aaKnown RBP12.52□□□□□ -0.41
SSX3-204ENST00000612497 ARNTL2Q8WYA1 636 aa12.52□□□□□ -0.41
SSX3-204ENST00000612497 ARHGEF10LQ9HCE6 1279 aa12.52□□□□□ -0.41
SSX3-204ENST00000612497 SMC4Q9NTJ3 1288 aa12.52□□□□□ -0.41
SSX3-204ENST00000612497 MYH8P13535 1937 aa12.51□□□□□ -0.41
SSX3-204ENST00000612497 IGSF3O75054 1194 aa12.51□□□□□ -0.41
SSX3-204ENST00000612497 IDH1O75874 414 aaKnown RBP12.51□□□□□ -0.41
SSX3-204ENST00000612497 GJA9P57773 515 aa12.51□□□□□ -0.41
SSX3-204ENST00000612497 ACVR2BQ13705 512 aa12.51□□□□□ -0.41
SSX3-204ENST00000612497 TMEM179Q6ZVK1 233 aa12.51□□□□□ -0.41
SSX3-204ENST00000612497 MAGEB6Q8N7X4 407 aa12.51□□□□□ -0.41
SSX3-204ENST00000612497 DDX11Q96FC9 970 aa12.51□□□□□ -0.41
SSX3-204ENST00000612497 UPF3AQ9H1J1 476 aaKnown RBP12.51□□□□□ -0.41
SSX3-204ENST00000612497 WDR46O15213 610 aaKnown RBP12.5□□□□□ -0.41
SSX3-204ENST00000612497 ADCY6O43306 1168 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 SSTR3P32745 418 aaPredicted RBP12.5□□□□□ -0.41
SSX3-204ENST00000612497 COPB2P35606 906 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 CCDC144BQ3MJ40 725 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 ALDH1L2Q3SY69 923 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 MAMDC4Q6UXC1 1216 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 CLEC10AQ8IUN9 316 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 GJD3Q8N144 294 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 FBXL18Q96ME1 805 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 DBNDD2Q9BQY9 259 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 NOC4LQ9BVI4 516 aaKnown RBP12.5□□□□□ -0.41
SSX3-204ENST00000612497 WNT8AQ9H1J5 351 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 SH2D4AQ9H788 454 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 VCPKMTQ9H867 229 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 ADAMTS5Q9UNA0 930 aa12.5□□□□□ -0.41
SSX3-204ENST00000612497 NAV1Q8NEY1 1877 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 VWA5AO00534 786 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 ALADP13716 330 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 BEX3Q00994 111 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 GABPAQ06546 454 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 MTX1Q13505 466 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 ITGA7Q13683 1181 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 TTLL4Q14679 1199 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 CXCL17Q6UXB2 119 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 NOL8Q76FK4 1167 aaKnown RBP12.49□□□□□ -0.41
SSX3-204ENST00000612497 SCLYQ96I15 445 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 TRPV6Q9H1D0 765 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 ABHD16BQ9H3Z7 469 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.49□□□□□ -0.41
SSX3-204ENST00000612497 ZNF214Q9UL59 606 aaPredicted RBP12.49□□□□□ -0.41
SSX3-204ENST00000612497 NOB1Q9ULX3 412 aaKnown RBP12.49□□□□□ -0.41
SSX3-204ENST00000612497 TMX2Q9Y320 296 aa12.49□□□□□ -0.41
SSX3-204ENST00000612497 B4GALT4O60513 344 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 GNAI3P08754 354 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 TAP1Q03518 808 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 EVX2Q03828 476 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 ICA1Q05084 483 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 GRB10Q13322 594 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 SIAH1Q8IUQ4 282 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 SLC43A3Q8NBI5 491 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 API5Q9BZZ5 524 aaKnown RBP12.48□□□□□ -0.41
SSX3-204ENST00000612497 MCM9Q9NXL9 1143 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 FPGT-TNNI3KV9GXZ4 949 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 SCN5AQ14524 2016 aa12.48□□□□□ -0.41
SSX3-204ENST00000612497 KIF28PB7ZC32 967 aa12.47□□□□□ -0.41
SSX3-204ENST00000612497 CTAGE5O15320 804 aa12.47□□□□□ -0.41
SSX3-204ENST00000612497 RAD21O60216 631 aa12.47□□□□□ -0.41
SSX3-204ENST00000612497 DEFB128Q7Z7B8 93 aa12.47□□□□□ -0.41
SSX3-204ENST00000612497 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
SSX3-204ENST00000612497 FAM178BQ8IXR5 827 aa12.47□□□□□ -0.41
SSX3-204ENST00000612497 VWCEQ96DN2 955 aa12.47□□□□□ -0.41
SSX3-204ENST00000612497 ZNF512BQ96KM6 892 aaPredicted RBP12.47□□□□□ -0.41
SSX3-204ENST00000612497 KCNH6Q9H252 994 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms