RNA–Protein interactions for RNA: ENST00000612093.1

CSPG4P10-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

TSL 2 BASIC

Gene CSPG4P10, Length 3,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-202ENST00000612093 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.37
CSPG4P10-202ENST00000612093 CTIFO43310 598 aaKnown RBP12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 DEXIO95424 95 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 RHOXF2BP0C7M4 288 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 TGFB2P61812 414 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 MRPS25P82663 173 aaKnown RBP12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 NR5A1Q13285 461 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 TMTC3Q6ZXV5 915 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 USP49Q70CQ1 688 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 ZSCAN29Q8IWY8 852 aaPredicted RBP12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 DHX37Q8IY37 1157 aaKnown RBP12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 STAG2Q8N3U4 1231 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 CEP95Q96GE4 821 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 TMEM47Q9BQJ4 181 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 RHOXF2Q9BQY4 288 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 ZNF446Q9NWS9 450 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 VPS54Q9P1Q0 977 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 DDX41Q9UJV9 622 aaKnown RBP12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 RCOR1Q9UKL0 485 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 BCS1LQ9Y276 419 aa12.71□□□□□ -0.38
CSPG4P10-202ENST00000612093 MYH15Q9Y2K3 1946 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 BTBD18B2RXH4 712 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 CALM1P0DP23 149 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 CALM2P0DP24 149 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 CALM3P0DP25 149 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 CDC25AP30304 524 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 FAM193AP78312 1265 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 DGKHQ86XP1 1220 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 PRMT6Q96LA8 375 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 SERPINB13Q9UIV8 391 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 MYH6P13533 1939 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 KIF13BQ9NQT8 1826 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 POLR2DO15514 142 aaKnown RBP12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 GOLGA8HP0CJ92 632 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 AKR1B1P15121 316 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 CCT6AP40227 531 aaKnown RBP12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 FKBP1AP62942 108 aaKnown RBP12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 ANO1Q5XXA6 986 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 SHISA4Q96DD7 197 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 UIMC1Q96RL1 719 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 FAM198AQ9UFP1 575 aa12.7□□□□□ -0.38
CSPG4P10-202ENST00000612093 DDTLA6NHG4 134 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 VEGFAP15692 232 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 GABPAQ06546 454 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 PKN1Q16512 942 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 TMCO3Q6UWJ1 677 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 FMR1NBQ8N0W7 255 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 CCDC12Q8WUD4 166 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 WASF1Q92558 559 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 GTPBP4Q9BZE4 634 aaKnown RBP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 CPVLQ9H3G5 476 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 SUGCTQ9HAC7 445 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 RBM28Q9NW13 759 aaKnown RBP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 SERPINA10Q9UK55 444 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 DNA2P51530 1060 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 DHX8Q14562 1220 aaKnown RBP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 SHROOM1Q2M3G4 852 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 NIM1KQ8IY84 436 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 RASSF8Q8NHQ8 419 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 NEDD1Q8NHV4 660 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 WDR24Q96S15 920 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 RNF26Q9BY78 433 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 PCDHA5Q9Y5H7 936 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 CLRN2A0PK11 232 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 BRAPQ7Z569 592 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 DIS3L2Q8IYB7 885 aaKnown RBP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 OXER1Q8TDS5 423 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 DHX58Q96C10 678 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 TFR2Q9UP52 801 aa12.69□□□□□ -0.38
CSPG4P10-202ENST00000612093 MPHOSPH10O00566 681 aaKnown RBP12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 HLA-DOAP06340 250 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 TOGARAM2Q6ZUX3 1019 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 SAMSN1Q9NSI8 373 aaKnown RBP12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 MMP1P03956 469 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 SHMT1P34896 483 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 LMAN1P49257 510 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 HDLBPQ00341 1268 aaKnown RBP12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 PPP2R5BQ15173 497 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 SH3BP5LQ7L8J4 393 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 TAOK3Q9H2K8 898 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 TCP11L1Q9NUJ3 509 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 GRIPAP1Q4V328 841 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 LRRC47Q8N1G4 583 aaKnown RBP12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 MRFAP1L1Q96HT8 127 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 SGIP1Q9BQI5 828 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 DNAJC18Q9H819 358 aa12.68□□□□□ -0.38
CSPG4P10-202ENST00000612093 PRPF3O43395 683 aaKnown RBP12.67□□□□□ -0.38
CSPG4P10-202ENST00000612093 SLFN14P0C7P3 912 aa12.67□□□□□ -0.38
CSPG4P10-202ENST00000612093 KIF5BP33176 963 aa12.67□□□□□ -0.38
CSPG4P10-202ENST00000612093 ATP2B2Q01814 1243 aa12.67□□□□□ -0.38
CSPG4P10-202ENST00000612093 TERF2Q15554 542 aa12.67□□□□□ -0.38
CSPG4P10-202ENST00000612093 ENGASEQ8NFI3 743 aa12.67□□□□□ -0.38
CSPG4P10-202ENST00000612093 NLGN2Q8NFZ4 835 aa12.67□□□□□ -0.38
CSPG4P10-202ENST00000612093 SRRTQ9BXP5 876 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms