RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 SAFBQ15424 915 aaKnown RBP eCLIP21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 SPATA1Q5VX52 437 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 NFXL1Q6ZNB6 911 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 GRAMD1CQ8IYS0 662 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 SDR42E1Q8WUS8 393 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 ADD3Q9UEY8 706 aaKnown RBP21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 CHD4Q14839 1912 aa21.54■■□□□ 1.04
SEMA3B-210ENST00000611067 FECHP22830 423 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 VSNL1P62760 191 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 CASP8Q14790 479 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 WHAMMP3Q1A5X7 153 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 C2CD5Q86YS7 1000 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 SLC35F6Q8N357 371 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 CCDC51Q96ER9 411 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 CTAGE1Q96RT6 745 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 SUGCTQ9HAC7 445 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 CTAGE15A4D2H0 777 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 H0YIN7 160 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 UBE2Q2LH0YL09 131 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 CTAGE8P0CG41 777 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 IL1R1P14778 569 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 DYNLL1P63167 89 aaKnown RBP21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 CTAGE6Q86UF2 777 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 CNGA4Q8IV77 575 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 CTAGE4Q8IX94 777 aa21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 SRPRBQ9Y5M8 271 aaKnown RBP21.53■■□□□ 1.04
SEMA3B-210ENST00000611067 DUOX1Q9NRD9 1551 aa21.52■■□□□ 1.04
SEMA3B-210ENST00000611067 HSP90B2PQ58FF3 399 aa21.52■■□□□ 1.04
SEMA3B-210ENST00000611067 NOM1Q5C9Z4 860 aaKnown RBP21.52■■□□□ 1.04
SEMA3B-210ENST00000611067 CTR9Q6PD62 1173 aa21.52■■□□□ 1.04
SEMA3B-210ENST00000611067 DIS3L2Q8IYB7 885 aaKnown RBP21.52■■□□□ 1.04
SEMA3B-210ENST00000611067 GOLGA6L1Q8N7Z2 621 aa21.52■■□□□ 1.04
SEMA3B-210ENST00000611067 CPLX3Q8WVH0 158 aa21.52■■□□□ 1.04
SEMA3B-210ENST00000611067 NAPGQ99747 312 aaPredicted RBP21.52■■□□□ 1.04
SEMA3B-210ENST00000611067 FOXP1Q9H334 677 aaPredicted RBP21.52■■□□□ 1.04
SEMA3B-210ENST00000611067 CNNM2Q9H8M5 875 aa21.52■■□□□ 1.04
SEMA3B-210ENST00000611067 RHOXF2BP0C7M4 288 aa21.52■■□□□ 1.03
SEMA3B-210ENST00000611067 IFNAR1P17181 557 aa21.52■■□□□ 1.03
SEMA3B-210ENST00000611067 LIFRP42702 1097 aa21.52■■□□□ 1.03
SEMA3B-210ENST00000611067 NOP2P46087 812 aaKnown RBP21.52■■□□□ 1.03
SEMA3B-210ENST00000611067 RHOXF2Q9BQY4 288 aa21.52■■□□□ 1.03
SEMA3B-210ENST00000611067 AATFQ9NY61 560 aaKnown RBP eCLIP21.52■■□□□ 1.03
SEMA3B-210ENST00000611067 MYO1AQ9UBC5 1043 aa21.52■■□□□ 1.03
SEMA3B-210ENST00000611067 MKRN1Q9UHC7 482 aaKnown RBP21.52■■□□□ 1.03
SEMA3B-210ENST00000611067 TIAM2Q8IVF5 1701 aa21.51■■□□□ 1.03
SEMA3B-210ENST00000611067 CTDSPL2Q05D32 466 aa21.51■■□□□ 1.03
SEMA3B-210ENST00000611067 TMEM67Q5HYA8 995 aa21.51■■□□□ 1.03
SEMA3B-210ENST00000611067 AKNAD1Q5T1N1 836 aa21.51■■□□□ 1.03
SEMA3B-210ENST00000611067 CDKAL1Q5VV42 579 aa21.51■■□□□ 1.03
SEMA3B-210ENST00000611067 DPP8Q6V1X1 898 aaPredicted RBP21.51■■□□□ 1.03
SEMA3B-210ENST00000611067 MYL10Q9BUA6 226 aa21.51■■□□□ 1.03
SEMA3B-210ENST00000611067 ACBD3Q9H3P7 528 aa21.51■■□□□ 1.03
SEMA3B-210ENST00000611067 MED4Q9NPJ6 270 aa21.51■■□□□ 1.03
SEMA3B-210ENST00000611067 GSTO1P78417 241 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 FILIP1LQ4L180 1135 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 WWC2Q6AWC2 1192 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 MFSD6Q6ZSS7 791 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 CRNKL1Q9BZJ0 848 aaKnown RBP21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 CEP131Q9UPN4 1083 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 SLC12A7Q9Y666 1083 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 ITIH6Q6UXX5 1313 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 SYNRGQ9UMZ2 1314 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 KIAA1551Q9HCM1 1747 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 CASP14P31944 242 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 CUL4BQ13620 913 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 CCDC102AQ96A19 550 aa21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 RNF41Q9H4P4 317 aaPredicted RBP21.5■■□□□ 1.03
SEMA3B-210ENST00000611067 STYK1Q6J9G0 422 aa21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 WDR93Q6P2C0 686 aa21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 TMTC1Q8IUR5 882 aa21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 KRT23Q9C075 422 aa21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 ZC3H12CQ9C0D7 883 aaKnown RBP21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 PCDHB6Q9Y5E3 794 aa21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 NID2Q14112 1375 aa21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 GYPCP04921 128 aa21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 PPARAQ07869 468 aa21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 PLCD3Q8N3E9 789 aa21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 STAG1Q8WVM7 1258 aa21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 TOMM22Q9NS69 142 aa21.49■■□□□ 1.03
SEMA3B-210ENST00000611067 MINDY4BA8MYZ0 360 aa21.48■■□□□ 1.03
SEMA3B-210ENST00000611067 RIMBP2O15034 1052 aa21.48■■□□□ 1.03
SEMA3B-210ENST00000611067 GUCY1A2P33402 732 aa21.48■■□□□ 1.03
SEMA3B-210ENST00000611067 MAGEA9P43362 315 aa21.48■■□□□ 1.03
SEMA3B-210ENST00000611067 ACRBPQ8NEB7 543 aa21.48■■□□□ 1.03
SEMA3B-210ENST00000611067 TBC1D22AQ8WUA7 517 aa21.48■■□□□ 1.03
SEMA3B-210ENST00000611067 COA1Q9GZY4 146 aa21.48■■□□□ 1.03
SEMA3B-210ENST00000611067 CSRNP2Q9H175 543 aa21.48■■□□□ 1.03
SEMA3B-210ENST00000611067 KCNJ14Q9UNX9 436 aa21.48■■□□□ 1.03
SEMA3B-210ENST00000611067 CD44P16070 742 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-210ENST00000611067 FXR1P51114 621 aaKnown RBP eCLIP21.48■■□□□ 1.03
SEMA3B-210ENST00000611067 TFRCP02786 760 aaKnown RBP21.47■■□□□ 1.03
SEMA3B-210ENST00000611067 LDHCP07864 332 aa21.47■■□□□ 1.03
SEMA3B-210ENST00000611067 KLHL10Q6JEL2 608 aa21.47■■□□□ 1.03
SEMA3B-210ENST00000611067 FOXR1Q6PIV2 292 aa21.47■■□□□ 1.03
SEMA3B-210ENST00000611067 USP49Q70CQ1 688 aa21.47■■□□□ 1.03
SEMA3B-210ENST00000611067 TRIM22Q8IYM9 498 aa21.47■■□□□ 1.03
SEMA3B-210ENST00000611067 VIPAS39Q9H9C1 493 aa21.47■■□□□ 1.03
SEMA3B-210ENST00000611067 BAZ2AQ9UIF9 1905 aaKnown RBP21.47■■□□□ 1.03
SEMA3B-210ENST00000611067 LRRIQ3A6PVS8 624 aaPredicted RBP21.46■■□□□ 1.03
SEMA3B-210ENST00000611067 STX17P56962 302 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms