RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 PTPN18Q99952 460 aa10.32□□□□□ -0.76
ITGB5-212ENST00000608657 SLF1Q9BQI6 1058 aa10.32□□□□□ -0.76
ITGB5-212ENST00000608657 LARP6Q9BRS8 491 aaKnown RBP10.32□□□□□ -0.76
ITGB5-212ENST00000608657 RBM28Q9NW13 759 aaKnown RBP10.32□□□□□ -0.76
ITGB5-212ENST00000608657 FEM1BQ9UK73 627 aa10.32□□□□□ -0.76
ITGB5-212ENST00000608657 NID2Q14112 1375 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 DHX16O60231 1041 aaKnown RBP10.31□□□□□ -0.76
ITGB5-212ENST00000608657 EVCP57679 992 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 STK3Q13188 491 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 COG2Q14746 738 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 RTN1Q16799 776 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 STAG2Q8N3U4 1231 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 FANCBQ8NB91 859 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 CHURC1Q8WUH1 139 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 ZNF274Q96GC6 653 aaPredicted RBP10.31□□□□□ -0.76
ITGB5-212ENST00000608657 ASCC2Q9H1I8 757 aaPredicted RBP10.31□□□□□ -0.76
ITGB5-212ENST00000608657 FBXO28Q9NVF7 368 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 MAD2L2Q9UI95 211 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 TPCN1Q9ULQ1 816 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 CTDP1Q9Y5B0 961 aaPredicted RBP10.31□□□□□ -0.76
ITGB5-212ENST00000608657 MYPNQ86TC9 1320 aa10.31□□□□□ -0.76
ITGB5-212ENST00000608657 CCDC196A0A1B0GTZ2 297 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 PALM3A6NDB9 673 aaPredicted RBP10.3□□□□□ -0.76
ITGB5-212ENST00000608657 GOLGA6L3A6NEY3 463 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 SPDYE16A6NNV3 312 aaPredicted RBP10.3□□□□□ -0.76
ITGB5-212ENST00000608657 KLRF2D3W0D1 207 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 PLA2G6O60733 806 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 CYP2C8P10632 490 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 PDIA3P30101 505 aaKnown RBP10.3□□□□□ -0.76
ITGB5-212ENST00000608657 DSG3P32926 999 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 SLC16A2P36021 539 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 GNAQP50148 359 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 HERVK_113P62684 666 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 CCT2P78371 535 aaKnown RBP10.3□□□□□ -0.76
ITGB5-212ENST00000608657 PPP2R5BQ15173 497 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 SYDE2Q5VT97 1194 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 TTBK2Q6IQ55 1244 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 BTNL9Q6UXG8 535 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 CLEC17AQ6ZS10 378 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 PRPF38AQ8NAV1 312 aaKnown RBP10.3□□□□□ -0.76
ITGB5-212ENST00000608657 GTF3C2Q8WUA4 911 aaPredicted RBP10.3□□□□□ -0.76
ITGB5-212ENST00000608657 KIFC2Q96AC6 838 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 ATG4CQ96DT6 458 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 ZSCAN31Q96LW9 406 aaPredicted RBP10.3□□□□□ -0.76
ITGB5-212ENST00000608657 LZTS2Q9BRK4 669 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 BEGAINQ9BUH8 593 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 ZFYVE28Q9HCC9 887 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 HOXC10Q9NYD6 342 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 PPP1R9AQ9ULJ8 1098 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 LIMCH1Q9UPQ0 1083 aa10.3□□□□□ -0.76
ITGB5-212ENST00000608657 CPLX1O14810 134 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 PFKFB2O60825 505 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 ZBED4O75132 1171 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 PLEKHA8P1O95397 391 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 LARGE1O95461 756 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 PDIA4P13667 645 aaKnown RBP10.29□□□□□ -0.76
ITGB5-212ENST00000608657 DDIT3P35638 169 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 GCLCP48506 637 aaPredicted RBP10.29□□□□□ -0.76
ITGB5-212ENST00000608657 MAP2K1Q02750 393 aaPredicted RBP10.29□□□□□ -0.76
ITGB5-212ENST00000608657 CPLX2Q6PUV4 134 aaKnown RBP10.29□□□□□ -0.76
ITGB5-212ENST00000608657 TMTC3Q6ZXV5 915 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 P2RX7Q99572 595 aaKnown RBP10.29□□□□□ -0.76
ITGB5-212ENST00000608657 PAGR1Q9BTK6 254 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 UBA5Q9GZZ9 404 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 CPVLQ9H3G5 476 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 PRR12Q9ULL5 1215 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 HPS5Q9UPZ3 1129 aa10.29□□□□□ -0.76
ITGB5-212ENST00000608657 BAZ2BQ9UIF8 2168 aaKnown RBP10.28□□□□□ -0.76
ITGB5-212ENST00000608657 CA12O43570 354 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 TRAK2O60296 914 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 TRPA1O75762 1119 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 CD2BP2O95400 341 aaKnown RBP10.28□□□□□ -0.76
ITGB5-212ENST00000608657 FDX1P10109 184 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 CDC27P30260 824 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 CRHR2Q13324 411 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 ME3Q16798 604 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 LBX2Q6XYB7 198 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 ADGRF4Q8IZF3 695 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 CMTR1Q8N1G2 835 aaKnown RBP10.28□□□□□ -0.76
ITGB5-212ENST00000608657 DNAJC5GQ8N7S2 189 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 MB21D1Q8N884 522 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 GTF3C6Q969F1 213 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 SPZ1Q9BXG8 430 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 NCOA5Q9HCD5 579 aaKnown RBP10.28□□□□□ -0.76
ITGB5-212ENST00000608657 VAT1LQ9HCJ6 419 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 SH2B1Q9NRF2 756 aaPredicted RBP10.28□□□□□ -0.76
ITGB5-212ENST00000608657 RNF186Q9NXI6 227 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 SAGE1Q9NXZ1 904 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 RBBP6Q7Z6E9 1792 aaKnown RBP10.28□□□□□ -0.76
ITGB5-212ENST00000608657 CNTNAP5Q8WYK1 1306 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 ADGRA2Q96PE1 1338 aa10.28□□□□□ -0.76
ITGB5-212ENST00000608657 VWA5AO00534 786 aa10.27□□□□□ -0.77
ITGB5-212ENST00000608657 TLR2O60603 784 aa10.27□□□□□ -0.77
ITGB5-212ENST00000608657 CDKL5O76039 1030 aa10.27□□□□□ -0.77
ITGB5-212ENST00000608657 SMARCA1P28370 1054 aa10.27□□□□□ -0.77
ITGB5-212ENST00000608657 ADD1P35611 737 aaKnown RBP10.27□□□□□ -0.77
ITGB5-212ENST00000608657 MRE11P49959 708 aa10.27□□□□□ -0.77
ITGB5-212ENST00000608657 SCRN1Q12765 414 aa10.27□□□□□ -0.77
ITGB5-212ENST00000608657 PLS1Q14651 629 aa10.27□□□□□ -0.77
ITGB5-212ENST00000608657 CDC37Q16543 378 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms