RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 GPCPD1Q9NPB8 672 aa17.09■□□□□ 0.33
HDDC2-204ENST00000608295 RAD50Q92878 1312 aa17.09■□□□□ 0.33
HDDC2-204ENST00000608295 MKI67P46013 3256 aaKnown RBP17.08■□□□□ 0.33
HDDC2-204ENST00000608295 SLC16A2P36021 539 aa17.08■□□□□ 0.32
HDDC2-204ENST00000608295 STAT3P40763 770 aa17.08■□□□□ 0.32
HDDC2-204ENST00000608295 GJA8P48165 433 aa17.08■□□□□ 0.32
HDDC2-204ENST00000608295 STAT2P52630 851 aa17.08■□□□□ 0.32
HDDC2-204ENST00000608295 CACNB2Q08289 660 aaPredicted RBP17.08■□□□□ 0.32
HDDC2-204ENST00000608295 CCDC174Q6PII3 467 aa17.08■□□□□ 0.32
HDDC2-204ENST00000608295 SHCBP1Q8NEM2 672 aa17.08■□□□□ 0.32
HDDC2-204ENST00000608295 RUFY2Q8WXA3 655 aa17.08■□□□□ 0.32
HDDC2-204ENST00000608295 ESR2Q92731 530 aa17.08■□□□□ 0.32
HDDC2-204ENST00000608295 TMEM47Q9BQJ4 181 aa17.08■□□□□ 0.32
HDDC2-204ENST00000608295 RNF41Q9H4P4 317 aaPredicted RBP17.08■□□□□ 0.32
HDDC2-204ENST00000608295 FEM1BQ9UK73 627 aa17.08■□□□□ 0.32
HDDC2-204ENST00000608295 COBLO75128 1261 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 ZBED4O75132 1171 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 FARP2O94887 1054 aaPredicted RBP17.07■□□□□ 0.32
HDDC2-204ENST00000608295 FGRP09769 529 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 FCER1AP12319 257 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 XRCC5P13010 732 aaKnown RBP17.07■□□□□ 0.32
HDDC2-204ENST00000608295 CNGA1P29973 690 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 TTBK2Q6IQ55 1244 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 RIOX2Q8IUF8 465 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 PRPF38AQ8NAV1 312 aaKnown RBP17.07■□□□□ 0.32
HDDC2-204ENST00000608295 DIS3LQ8TF46 1054 aaKnown RBP17.07■□□□□ 0.32
HDDC2-204ENST00000608295 TEX13BQ9BXU2 312 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 MROH8Q9H579 483 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 PAK6Q9NQU5 681 aaPredicted RBP17.07■□□□□ 0.32
HDDC2-204ENST00000608295 ADAMTS5Q9UNA0 930 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 RIPK3Q9Y572 518 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 TAF6LQ9Y6J9 622 aa17.07■□□□□ 0.32
HDDC2-204ENST00000608295 MCM3APO60318 1980 aa17.06■□□□□ 0.32
HDDC2-204ENST00000608295 RPTORQ8N122 1335 aa17.06■□□□□ 0.32
HDDC2-204ENST00000608295 SGPL1O95470 568 aa17.06■□□□□ 0.32
HDDC2-204ENST00000608295 TOP1P11387 765 aaKnown RBP17.06■□□□□ 0.32
HDDC2-204ENST00000608295 KCTD2Q14681 263 aa17.06■□□□□ 0.32
HDDC2-204ENST00000608295 MFSD14CQ5VZR4 134 aa17.06■□□□□ 0.32
HDDC2-204ENST00000608295 ANO1Q5XXA6 986 aa17.06■□□□□ 0.32
HDDC2-204ENST00000608295 GMCL1Q96IK5 515 aa17.06■□□□□ 0.32
HDDC2-204ENST00000608295 CTNNA3Q9UI47 895 aa17.06■□□□□ 0.32
HDDC2-204ENST00000608295 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
HDDC2-204ENST00000608295 SGSM2O43147 1006 aa17.05■□□□□ 0.32
HDDC2-204ENST00000608295 SLC25A27O95847 323 aa17.05■□□□□ 0.32
HDDC2-204ENST00000608295 PPP4R3BQ5MIZ7 849 aa17.05■□□□□ 0.32
HDDC2-204ENST00000608295 RCSD1Q6JBY9 416 aa17.05■□□□□ 0.32
HDDC2-204ENST00000608295 CPVLQ9H3G5 476 aa17.05■□□□□ 0.32
HDDC2-204ENST00000608295 SLC38A10Q9HBR0 1119 aa17.05■□□□□ 0.32
HDDC2-204ENST00000608295 SYNPO2Q9UMS6 1093 aa17.05■□□□□ 0.32
HDDC2-204ENST00000608295 ALPK3Q96L96 1907 aa17.05■□□□□ 0.32
HDDC2-204ENST00000608295 TNKSO95271 1327 aa17.04■□□□□ 0.32
HDDC2-204ENST00000608295 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
HDDC2-204ENST00000608295 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
HDDC2-204ENST00000608295 MAP3K21Q5TCX8 1036 aa17.04■□□□□ 0.32
HDDC2-204ENST00000608295 FAM160B2Q86V87 743 aa17.04■□□□□ 0.32
HDDC2-204ENST00000608295 TRMT44Q8IYL2 757 aaKnown RBP17.04■□□□□ 0.32
HDDC2-204ENST00000608295 DCAF4Q8WV16 495 aa17.04■□□□□ 0.32
HDDC2-204ENST00000608295 AGBL1Q96MI9 1066 aa17.04■□□□□ 0.32
HDDC2-204ENST00000608295 PRR12Q9ULL5 1215 aa17.04■□□□□ 0.32
HDDC2-204ENST00000608295 PDHBP11177 359 aa17.03■□□□□ 0.32
HDDC2-204ENST00000608295 PCP11498 1178 aaKnown RBP17.03■□□□□ 0.32
HDDC2-204ENST00000608295 ALAS1P13196 640 aa17.03■□□□□ 0.32
HDDC2-204ENST00000608295 PRAMEF19Q5SWL8 479 aa17.03■□□□□ 0.32
HDDC2-204ENST00000608295 IQCA1Q86XH1 822 aa17.03■□□□□ 0.32
HDDC2-204ENST00000608295 TRPV1Q8NER1 839 aa17.03■□□□□ 0.32
HDDC2-204ENST00000608295 CHURC1Q8WUH1 139 aa17.03■□□□□ 0.32
HDDC2-204ENST00000608295 MAML3Q96JK9 1138 aa17.03■□□□□ 0.32
HDDC2-204ENST00000608295 MYH6P13533 1939 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 STRNO43815 780 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 CYP21A2P08686 494 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 HOXC6P09630 235 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 CYB5R4Q7L1T6 521 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 CHST3Q7LGC8 479 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 ENAHQ8N8S7 591 aaPredicted RBP17.02■□□□□ 0.32
HDDC2-204ENST00000608295 DDX11Q96FC9 970 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 PAWRQ96IZ0 340 aaKnown RBP17.02■□□□□ 0.32
HDDC2-204ENST00000608295 ZSCAN10Q96SZ4 725 aaPredicted RBP17.02■□□□□ 0.32
HDDC2-204ENST00000608295 UBAC1Q9BSL1 405 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 KAT14Q9H8E8 782 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 ANO2Q9NQ90 1003 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 RNF146Q9NTX7 359 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 TCP11L1Q9NUJ3 509 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 ZSWIM5Q9P217 1185 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 PCDH10Q9P2E7 1040 aa17.02■□□□□ 0.32
HDDC2-204ENST00000608295 RBM8AQ9Y5S9 174 aaKnown RBP17.02■□□□□ 0.32
HDDC2-204ENST00000608295 LCTP09848 1927 aa17.02■□□□□ 0.31
HDDC2-204ENST00000608295 CYBAP13498 195 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 NOVP48745 357 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 SYDE2Q5VT97 1194 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 STOX1Q6ZVD7 989 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 ABRAQ8N0Z2 381 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 ANKRD35Q8N283 1001 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 PNMA1Q8ND90 353 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 DPF3Q92784 378 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 ESYT1Q9BSJ8 1104 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 KRT23Q9C075 422 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 SLC5A4Q9NY91 659 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 CCPG1Q9ULG6 757 aa17.01■□□□□ 0.31
HDDC2-204ENST00000608295 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
HDDC2-204ENST00000608295 ZNF536O15090 1300 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms