RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
CTSA-219ENST00000607841 BTBD7Q9P203 1132 aa16.66■□□□□ 0.26
CTSA-219ENST00000607841 TRIM17Q9Y577 477 aa16.66■□□□□ 0.26
CTSA-219ENST00000607841 DDAH1O94760 285 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 CALM1P0DP23 149 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 CALM2P0DP24 149 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 CALM3P0DP25 149 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 RPS6KB1P23443 525 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 COPB2P35606 906 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 OAZ1P54368 228 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 PRMT2P55345 433 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 PLS1Q14651 629 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 TMEM132BQ14DG7 1078 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 COA7Q96BR5 231 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 MAP3K14Q99558 947 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 LRRC2Q9BYS8 371 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 SPATC1LQ9H0A9 340 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 UPF2Q9HAU5 1272 aaKnown RBP16.65■□□□□ 0.26
CTSA-219ENST00000607841 SLC38A10Q9HBR0 1119 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 ZSWIM6Q9HCJ5 1215 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 PRR12Q9ULL5 1215 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 SLC12A7Q9Y666 1083 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 CYP46A1Q9Y6A2 500 aa16.65■□□□□ 0.26
CTSA-219ENST00000607841 SLC25A27O95847 323 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 STAT3P40763 770 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 TROAPQ12815 778 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 SYDE2Q5VT97 1194 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 RUFY3Q7L099 469 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 RASGRP2Q7LDG7 609 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 OTOP1Q7RTM1 612 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 SGMS1Q86VZ5 419 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 ZNF654Q8IZM8 581 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 SHCBP1Q8NEM2 672 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 CTCFLQ8NI51 663 aaPredicted RBP16.64■□□□□ 0.25
CTSA-219ENST00000607841 NUP133Q8WUM0 1156 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 TRIM47Q96LD4 638 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 TEX13BQ9BXU2 312 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 ARHGAP39Q9C0H5 1083 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 SENP2Q9HC62 589 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 GPHNQ9NQX3 736 aaPredicted RBP16.64■□□□□ 0.25
CTSA-219ENST00000607841 MYH4Q9Y623 1939 aa16.64■□□□□ 0.25
CTSA-219ENST00000607841 ATP2A1O14983 1001 aa16.63■□□□□ 0.25
CTSA-219ENST00000607841 PEX10O60683 326 aa16.63■□□□□ 0.25
CTSA-219ENST00000607841 ECM2O94769 699 aaPredicted RBP16.63■□□□□ 0.25
CTSA-219ENST00000607841 GOLGA8HP0CJ92 632 aa16.63■□□□□ 0.25
CTSA-219ENST00000607841 KIF5BP33176 963 aa16.63■□□□□ 0.25
CTSA-219ENST00000607841 SLC16A2P36021 539 aa16.63■□□□□ 0.25
CTSA-219ENST00000607841 COL9A3Q14050 684 aaPredicted RBP16.63■□□□□ 0.25
CTSA-219ENST00000607841 GRM4Q14833 912 aa16.63■□□□□ 0.25
CTSA-219ENST00000607841 FBXL16Q8N461 479 aa16.63■□□□□ 0.25
CTSA-219ENST00000607841 REPS2Q8NFH8 660 aa16.63■□□□□ 0.25
CTSA-219ENST00000607841 TCEANC2Q96MN5 208 aa16.63■□□□□ 0.25
CTSA-219ENST00000607841 MOV10L1Q9BXT6 1211 aaKnown RBP16.63■□□□□ 0.25
CTSA-219ENST00000607841 MROH8Q9H579 483 aa16.63■□□□□ 0.25
CTSA-219ENST00000607841 PNMA2Q9UL42 364 aa16.63■□□□□ 0.25
CTSA-219ENST00000607841 ZNF214Q9UL59 606 aaPredicted RBP16.63■□□□□ 0.25
CTSA-219ENST00000607841 PALM3A6NDB9 673 aaPredicted RBP16.62■□□□□ 0.25
CTSA-219ENST00000607841 CPA1P15085 419 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 GNAQP50148 359 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 WDR78Q5VTH9 848 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 Q6ZUG5 572 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 PLEKHH3Q7Z736 793 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 NCAPG2Q86XI2 1143 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 RIOX2Q8IUF8 465 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 CPXCR1Q8N123 301 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 PORCNQ9H237 461 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 SRRDQ9UH36 339 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 MAD2L2Q9UI95 211 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 IVNS1ABPQ9Y6Y0 642 aa16.62■□□□□ 0.25
CTSA-219ENST00000607841 KLRF2D3W0D1 207 aa16.61■□□□□ 0.25
CTSA-219ENST00000607841 STRNO43815 780 aa16.61■□□□□ 0.25
CTSA-219ENST00000607841 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
CTSA-219ENST00000607841 ERCC3P19447 782 aa16.61■□□□□ 0.25
CTSA-219ENST00000607841 CTGFP29279 349 aa16.61■□□□□ 0.25
CTSA-219ENST00000607841 SNRNP48Q6IEG0 339 aaKnown RBP16.61■□□□□ 0.25
CTSA-219ENST00000607841 GPR142Q7Z601 462 aa16.61■□□□□ 0.25
CTSA-219ENST00000607841 SOCS4Q8WXH5 440 aa16.61■□□□□ 0.25
CTSA-219ENST00000607841 IL17RAQ96F46 866 aa16.61■□□□□ 0.25
CTSA-219ENST00000607841 LZTS2Q9BRK4 669 aa16.61■□□□□ 0.25
CTSA-219ENST00000607841 UBA5Q9GZZ9 404 aa16.61■□□□□ 0.25
CTSA-219ENST00000607841 RANBP17Q9H2T7 1088 aaKnown RBP16.61■□□□□ 0.25
CTSA-219ENST00000607841 RAVER2Q9HCJ3 691 aaKnown RBP16.61■□□□□ 0.25
CTSA-219ENST00000607841 PTPN22Q9Y2R2 807 aa16.61■□□□□ 0.25
CTSA-219ENST00000607841 ZBTB43O43298 467 aa16.6■□□□□ 0.25
CTSA-219ENST00000607841 FBXO46Q6PJ61 603 aaPredicted RBP16.6■□□□□ 0.25
CTSA-219ENST00000607841 STAG2Q8N3U4 1231 aa16.6■□□□□ 0.25
CTSA-219ENST00000607841 BRF1Q92994 677 aa16.6■□□□□ 0.25
CTSA-219ENST00000607841 NUDT12Q9BQG2 462 aa16.6■□□□□ 0.25
CTSA-219ENST00000607841 C22orf23Q9BZE7 217 aa16.6■□□□□ 0.25
CTSA-219ENST00000607841 UPF3BQ9BZI7 483 aaKnown RBP16.6■□□□□ 0.25
CTSA-219ENST00000607841 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
CTSA-219ENST00000607841 KLF18A0A0U1RQI7 1052 aa16.59■□□□□ 0.25
CTSA-219ENST00000607841 ICAM1P05362 532 aa16.59■□□□□ 0.25
CTSA-219ENST00000607841 PTPREP23469 700 aa16.59■□□□□ 0.25
CTSA-219ENST00000607841 SLC4A3P48751 1232 aa16.59■□□□□ 0.25
CTSA-219ENST00000607841 RCAN1P53805 252 aa16.59■□□□□ 0.25
CTSA-219ENST00000607841 CAP1Q01518 475 aa16.59■□□□□ 0.25
CTSA-219ENST00000607841 TKFCQ3LXA3 575 aa16.59■□□□□ 0.25
CTSA-219ENST00000607841 CCDC174Q6PII3 467 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms