RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 MAP3K14Q99558 947 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 UBA5Q9GZZ9 404 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 ASCC2Q9H1I8 757 aaPredicted RBP8.95□□□□□ -0.98
MSH6-211ENST00000606499 FAM217BQ9NTX9 383 aaPredicted RBP8.95□□□□□ -0.98
MSH6-211ENST00000606499 ZSWIM8A7E2V4 1837 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 FLOT1O75955 427 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 CYP2C8P10632 490 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 MCM2P49736 904 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 SNAP25P60880 206 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 SREBF2Q12772 1141 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 SYDE2Q5VT97 1194 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 CATSPERGQ6ZRH7 1159 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 IFNL1Q8IU54 200 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 CCDC83Q8IWF9 413 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 CCDC82Q8N4S0 544 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 SRBD1Q8N5C6 995 aaKnown RBP8.94□□□□□ -0.98
MSH6-211ENST00000606499 IL27Q8NEV9 243 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 KIFC2Q96AC6 838 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 ATG4CQ96DT6 458 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 SLF1Q9BQI6 1058 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 SLKQ9H2G2 1235 aaPredicted RBP8.94□□□□□ -0.98
MSH6-211ENST00000606499 RBM28Q9NW13 759 aaKnown RBP8.94□□□□□ -0.98
MSH6-211ENST00000606499 FEM1BQ9UK73 627 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 PRR12Q9ULL5 1215 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 CNTNAP5Q8WYK1 1306 aa8.94□□□□□ -0.98
MSH6-211ENST00000606499 hCG_1642624A0A1W2PR95 340 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 SPDYE16A6NNV3 312 aaPredicted RBP8.93□□□□□ -0.98
MSH6-211ENST00000606499 K7ELQ4 463 aaPredicted RBP8.93□□□□□ -0.98
MSH6-211ENST00000606499 CYTH3O43739 400 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 DHX16O60231 1041 aaKnown RBP8.93□□□□□ -0.98
MSH6-211ENST00000606499 PEX10O60683 326 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 CTDNEP1O95476 244 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 HOXA7P31268 230 aaPredicted RBP8.93□□□□□ -0.98
MSH6-211ENST00000606499 TM4SF4P48230 202 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 HERVK_113P62684 666 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 IRX3P78415 501 aaPredicted RBP8.93□□□□□ -0.98
MSH6-211ENST00000606499 FUT2Q10981 343 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 PABPC4Q13310 644 aaKnown RBP eCLIP8.93□□□□□ -0.98
MSH6-211ENST00000606499 NTRK3Q16288 839 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 POTEEQ6S8J3 1075 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 BTNL9Q6UXG8 535 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 FAM160B2Q86V87 743 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 HSCBQ8IWL3 235 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 ADGRF4Q8IZF3 695 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 PRPF38AQ8NAV1 312 aaKnown RBP8.93□□□□□ -0.98
MSH6-211ENST00000606499 PIBF1Q8WXW3 757 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 PHKBQ93100 1093 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 SNX21Q969T3 373 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 ZSCAN31Q96LW9 406 aaPredicted RBP8.93□□□□□ -0.98
MSH6-211ENST00000606499 P2RX7Q99572 595 aaKnown RBP8.93□□□□□ -0.98
MSH6-211ENST00000606499 SPZ1Q9BXG8 430 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 VAT1LQ9HCJ6 419 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 SH2B1Q9NRF2 756 aaPredicted RBP8.93□□□□□ -0.98
MSH6-211ENST00000606499 PPP1R9AQ9ULJ8 1098 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 HTTP42858 3142 aa8.93□□□□□ -0.98
MSH6-211ENST00000606499 PLXNB2O15031 1838 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 MYPNQ86TC9 1320 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 CCDC196A0A1B0GTZ2 297 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 CPLX1O14810 134 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 JAK2O60674 1132 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 PLA2G6O60733 806 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 IFNAR1P17181 557 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 TAL1P17542 331 aaPredicted RBP8.92□□□□□ -0.98
MSH6-211ENST00000606499 OSBPP22059 807 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 DSG3P32926 999 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 MAP2K2P36507 400 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 GNAQP50148 359 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 INHBEP58166 350 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 COG2Q14746 738 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 PPP2R5BQ15173 497 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 TAF1CQ15572 869 aaPredicted RBP8.92□□□□□ -0.98
MSH6-211ENST00000606499 HOMER1Q86YM7 354 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 NSUN7Q8NE18 718 aaKnown RBP8.92□□□□□ -0.98
MSH6-211ENST00000606499 CHURC1Q8WUH1 139 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 PIGSQ96S52 555 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 RIOX1Q9H6W3 641 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 JMJD4Q9H9V9 463 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 PNMA3Q9UL41 463 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 SLC45A1Q9Y2W3 748 aa8.92□□□□□ -0.98
MSH6-211ENST00000606499 ADGRA2Q96PE1 1338 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 BAZ2BQ9UIF8 2168 aaKnown RBP8.91□□□□□ -0.98
MSH6-211ENST00000606499 PTPDC1A2A3K4 754 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 VWA5AO00534 786 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 PPP1R11O60927 126 aaPredicted RBP8.91□□□□□ -0.98
MSH6-211ENST00000606499 CRHR2Q13324 411 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 CUL4AQ13619 759 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 CDC37Q16543 378 aaPredicted RBP8.91□□□□□ -0.98
MSH6-211ENST00000606499 CCDC174Q6PII3 467 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 DNAJC5GQ8N7S2 189 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 REPS2Q8NFH8 660 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 SMCR8Q8TEV9 937 aaPredicted RBP8.91□□□□□ -0.98
MSH6-211ENST00000606499 PARK7Q99497 189 aaKnown RBP8.91□□□□□ -0.98
MSH6-211ENST00000606499 LZTS2Q9BRK4 669 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 PAGR1Q9BTK6 254 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 SLC26A6Q9BXS9 759 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 RANBP17Q9H2T7 1088 aaKnown RBP8.91□□□□□ -0.98
MSH6-211ENST00000606499 SLC38A10Q9HBR0 1119 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 ZCCHC17Q9NP64 241 aaKnown RBP8.91□□□□□ -0.98
MSH6-211ENST00000606499 BTBD7Q9P203 1132 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 RBM19Q9Y4C8 960 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms