RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 PDE6AP16499 860 aa16.09■□□□□ 0.17
CTSA-212ENST00000606394 PPM1EQ8WY54 764 aa16.09■□□□□ 0.17
CTSA-212ENST00000606394 CLUAP1Q96AJ1 413 aa16.09■□□□□ 0.17
CTSA-212ENST00000606394 FAM122AQ96E09 287 aa16.09■□□□□ 0.17
CTSA-212ENST00000606394 TSPYL2Q9H2G4 693 aaPredicted RBP16.09■□□□□ 0.17
CTSA-212ENST00000606394 MTIF3Q9H2K0 278 aaKnown RBP16.09■□□□□ 0.17
CTSA-212ENST00000606394 SPC25Q9HBM1 224 aa16.09■□□□□ 0.17
CTSA-212ENST00000606394 MSRAQ9UJ68 235 aa16.09■□□□□ 0.17
CTSA-212ENST00000606394 PPP1R9AQ9ULJ8 1098 aa16.09■□□□□ 0.17
CTSA-212ENST00000606394 COL11A1P12107 1806 aaPredicted RBP16.09■□□□□ 0.17
CTSA-212ENST00000606394 MYH8P13535 1937 aa16.09■□□□□ 0.17
CTSA-212ENST00000606394 AKR1B1P15121 316 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 CSF2RAP15509 400 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 PBX2P40425 430 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 ZNF467Q7Z7K2 595 aaPredicted RBP16.08■□□□□ 0.16
CTSA-212ENST00000606394 ERC1Q8IUD2 1116 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 TMEM57Q8N5G2 664 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 REPS2Q8NFH8 660 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 LENG1Q96BZ8 264 aaPredicted RBP16.08■□□□□ 0.16
CTSA-212ENST00000606394 C1QTNF1Q9BXJ1 281 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 TEX13BQ9BXU2 312 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 KANSL2Q9H9L4 492 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 GOPCQ9HD26 462 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 ATP8A2Q9NTI2 1148 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 ARIH1Q9Y4X5 557 aaPredicted RBP16.08■□□□□ 0.16
CTSA-212ENST00000606394 REV3LO60673 3130 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 PIEZO1Q92508 2521 aa16.08■□□□□ 0.16
CTSA-212ENST00000606394 A0A0U1RQG5 324 aaPredicted RBP16.07■□□□□ 0.16
CTSA-212ENST00000606394 ARVCFO00192 962 aa16.07■□□□□ 0.16
CTSA-212ENST00000606394 TLR3O15455 904 aaKnown RBP16.07■□□□□ 0.16
CTSA-212ENST00000606394 EVX2Q03828 476 aa16.07■□□□□ 0.16
CTSA-212ENST00000606394 ADGRE1Q14246 886 aa16.07■□□□□ 0.16
CTSA-212ENST00000606394 ZKSCAN2Q63HK3 967 aa16.07■□□□□ 0.16
CTSA-212ENST00000606394 SAMD1Q6SPF0 538 aaPredicted RBP16.07■□□□□ 0.16
CTSA-212ENST00000606394 ZNF365Q70YC5 407 aa16.07■□□□□ 0.16
CTSA-212ENST00000606394 SDR42E1Q8WUS8 393 aa16.07■□□□□ 0.16
CTSA-212ENST00000606394 HERVK_113Q902F9 699 aa16.07■□□□□ 0.16
CTSA-212ENST00000606394 CXXC1Q9P0U4 656 aaPredicted RBP16.07■□□□□ 0.16
CTSA-212ENST00000606394 TNNQ9UQP3 1299 aa16.07■□□□□ 0.16
CTSA-212ENST00000606394 ZNF532Q9HCE3 1301 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 DNAJC25-GNG10A0A024R161 153 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 TCRBV5S4A2TA0A5A2 114 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 GRXCR1A8MXD5 290 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 SNAI1O95863 264 aaPredicted RBP16.06■□□□□ 0.16
CTSA-212ENST00000606394 ASGR1P07306 291 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 C6orf222P0C671 652 aaPredicted RBP16.06■□□□□ 0.16
CTSA-212ENST00000606394 GJA9P57773 515 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 AACSQ86V21 672 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 CLEC10AQ8IUN9 316 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 FAM126BQ8IXS8 530 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 AMOTL1Q8IY63 956 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.06■□□□□ 0.16
CTSA-212ENST00000606394 DDX11Q96FC9 970 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 UPF3AQ9H1J1 476 aaKnown RBP16.06■□□□□ 0.16
CTSA-212ENST00000606394 SLC28A3Q9HAS3 691 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 IL23AQ9NPF7 189 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 FBXO28Q9NVF7 368 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 RAPGEFL1Q9UHV5 662 aa16.06■□□□□ 0.16
CTSA-212ENST00000606394 ZHX1Q9UKY1 873 aaPredicted RBP16.06■□□□□ 0.16
CTSA-212ENST00000606394 CYP2D6P10635 497 aa16.05■□□□□ 0.16
CTSA-212ENST00000606394 EEF2P13639 858 aaKnown RBP16.05■□□□□ 0.16
CTSA-212ENST00000606394 CDK8P49336 464 aa16.05■□□□□ 0.16
CTSA-212ENST00000606394 NKX3-2P78367 333 aa16.05■□□□□ 0.16
CTSA-212ENST00000606394 AAK1Q2M2I8 961 aa16.05■□□□□ 0.16
CTSA-212ENST00000606394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.05■□□□□ 0.16
CTSA-212ENST00000606394 LCORLQ8N3X6 602 aa16.05■□□□□ 0.16
CTSA-212ENST00000606394 DYNLL2Q96FJ2 89 aa16.05■□□□□ 0.16
CTSA-212ENST00000606394 SEZ6LQ9BYH1 1024 aa16.05■□□□□ 0.16
CTSA-212ENST00000606394 ABHD16BQ9H3Z7 469 aa16.05■□□□□ 0.16
CTSA-212ENST00000606394 ATP2A1O14983 1001 aa16.04■□□□□ 0.16
CTSA-212ENST00000606394 IGFBP4P22692 258 aa16.04■□□□□ 0.16
CTSA-212ENST00000606394 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
CTSA-212ENST00000606394 GNASQ5JWF2 1037 aa16.04■□□□□ 0.16
CTSA-212ENST00000606394 C12orf60Q5U649 245 aa16.04■□□□□ 0.16
CTSA-212ENST00000606394 C16orf86Q6ZW13 317 aa16.04■□□□□ 0.16
CTSA-212ENST00000606394 VTI1AQ96AJ9 217 aa16.04■□□□□ 0.16
CTSA-212ENST00000606394 MYADML2A6NDP7 307 aa16.03■□□□□ 0.16
CTSA-212ENST00000606394 CD4P01730 458 aa16.03■□□□□ 0.16
CTSA-212ENST00000606394 FGBP02675 491 aa16.03■□□□□ 0.16
CTSA-212ENST00000606394 ACRP10323 421 aa16.03■□□□□ 0.16
CTSA-212ENST00000606394 HOXD11P31277 338 aaPredicted RBP16.03■□□□□ 0.16
CTSA-212ENST00000606394 CCDC85BQ15834 202 aaPredicted RBP16.03■□□□□ 0.16
CTSA-212ENST00000606394 HSP90AB4PQ58FF6 505 aa16.03■□□□□ 0.16
CTSA-212ENST00000606394 FAM83BQ5T0W9 1011 aa16.03■□□□□ 0.16
CTSA-212ENST00000606394 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
CTSA-212ENST00000606394 DDRGK1Q96HY6 314 aa16.03■□□□□ 0.16
CTSA-212ENST00000606394 SLF1Q9BQI6 1058 aa16.03■□□□□ 0.16
CTSA-212ENST00000606394 PPP1R12CQ9BZL4 782 aa16.03■□□□□ 0.16
CTSA-212ENST00000606394 C1orf115Q9H7X2 142 aa16.03■□□□□ 0.16
CTSA-212ENST00000606394 APBB1O00213 710 aa16.02■□□□□ 0.16
CTSA-212ENST00000606394 CABYRO75952 493 aa16.02■□□□□ 0.16
CTSA-212ENST00000606394 BMP1P13497 986 aa16.02■□□□□ 0.16
CTSA-212ENST00000606394 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
CTSA-212ENST00000606394 PRPF38AQ8NAV1 312 aaKnown RBP16.02■□□□□ 0.16
CTSA-212ENST00000606394 SLC43A3Q8NBI5 491 aa16.02■□□□□ 0.16
CTSA-212ENST00000606394 ARMT1Q9H993 441 aa16.02■□□□□ 0.16
CTSA-212ENST00000606394 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.02■□□□□ 0.16
CTSA-212ENST00000606394 FBXO40Q9UH90 709 aa16.02■□□□□ 0.16
CTSA-212ENST00000606394 GOLIM4O00461 696 aa16.01■□□□□ 0.15
CTSA-212ENST00000606394 FTSJ3Q8IY81 847 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms