RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 ZMYM1Q5SVZ6 1142 aa21.67■■□□□ 1.06
CCDC12-213ENST00000605875 C9orf50Q5SZB4 431 aa21.67■■□□□ 1.06
CCDC12-213ENST00000605875 GIMAP6Q6P9H5 292 aa21.67■■□□□ 1.06
CCDC12-213ENST00000605875 SH3RF1Q7Z6J0 888 aa21.67■■□□□ 1.06
CCDC12-213ENST00000605875 REPS2Q8NFH8 660 aa21.67■■□□□ 1.06
CCDC12-213ENST00000605875 TRIM43BA6NCK2 446 aa21.66■■□□□ 1.06
CCDC12-213ENST00000605875 MINDY4BA8MYZ0 360 aa21.66■■□□□ 1.06
CCDC12-213ENST00000605875 PGK1P00558 417 aa21.66■■□□□ 1.06
CCDC12-213ENST00000605875 RASA1P20936 1047 aa21.66■■□□□ 1.06
CCDC12-213ENST00000605875 ZNF697Q5TEC3 545 aa21.66■■□□□ 1.06
CCDC12-213ENST00000605875 B4GALNT3Q6L9W6 998 aa21.66■■□□□ 1.06
CCDC12-213ENST00000605875 RNF180Q86T96 592 aa21.66■■□□□ 1.06
CCDC12-213ENST00000605875 SMC5Q8IY18 1101 aa21.66■■□□□ 1.06
CCDC12-213ENST00000605875 TRIM43Q96BQ3 446 aaPredicted RBP21.66■■□□□ 1.06
CCDC12-213ENST00000605875 NUP88Q99567 741 aaPredicted RBP21.66■■□□□ 1.06
CCDC12-213ENST00000605875 SLF1Q9BQI6 1058 aa21.66■■□□□ 1.06
CCDC12-213ENST00000605875 RWDD1Q9H446 243 aaPredicted RBP21.66■■□□□ 1.06
CCDC12-213ENST00000605875 MKNK2Q9HBH9 465 aa21.66■■□□□ 1.06
CCDC12-213ENST00000605875 SUPT16HQ9Y5B9 1047 aaKnown RBP21.66■■□□□ 1.06
CCDC12-213ENST00000605875 APPP05067 770 aa21.65■■□□□ 1.06
CCDC12-213ENST00000605875 ZNF865P0CJ78 1059 aaPredicted RBP21.65■■□□□ 1.06
CCDC12-213ENST00000605875 TLE2Q04725 743 aa21.65■■□□□ 1.06
CCDC12-213ENST00000605875 NYAP2Q9P242 653 aa21.65■■□□□ 1.06
CCDC12-213ENST00000605875 IGHDP01880 384 aa21.64■■□□□ 1.05
CCDC12-213ENST00000605875 AKR1A1P14550 325 aa21.64■■□□□ 1.05
CCDC12-213ENST00000605875 CCDC129Q6ZRS4 1044 aa21.64■■□□□ 1.05
CCDC12-213ENST00000605875 CNPY2Q9Y2B0 182 aa21.64■■□□□ 1.05
CCDC12-213ENST00000605875 F5H6K3 240 aa21.63■■□□□ 1.05
CCDC12-213ENST00000605875 KLRC3Q07444 240 aa21.63■■□□□ 1.05
CCDC12-213ENST00000605875 SNRNP48Q6IEG0 339 aaKnown RBP21.63■■□□□ 1.05
CCDC12-213ENST00000605875 EVI5LQ96CN4 794 aa21.63■■□□□ 1.05
CCDC12-213ENST00000605875 TEX13BQ9BXU2 312 aa21.63■■□□□ 1.05
CCDC12-213ENST00000605875 TACC3Q9Y6A5 838 aa21.63■■□□□ 1.05
CCDC12-213ENST00000605875 NDUFB10O96000 172 aa21.62■■□□□ 1.05
CCDC12-213ENST00000605875 CLTBP09497 229 aa21.62■■□□□ 1.05
CCDC12-213ENST00000605875 IFNL3Q8IZI9 196 aa21.62■■□□□ 1.05
CCDC12-213ENST00000605875 MSL3Q8N5Y2 521 aaKnown RBP21.62■■□□□ 1.05
CCDC12-213ENST00000605875 PRPF38AQ8NAV1 312 aaKnown RBP21.62■■□□□ 1.05
CCDC12-213ENST00000605875 LENG1Q96BZ8 264 aaPredicted RBP21.62■■□□□ 1.05
CCDC12-213ENST00000605875 DDX11Q96FC9 970 aa21.62■■□□□ 1.05
CCDC12-213ENST00000605875 CLIP2Q9UDT6 1046 aa21.62■■□□□ 1.05
CCDC12-213ENST00000605875 RIPK3Q9Y572 518 aa21.62■■□□□ 1.05
CCDC12-213ENST00000605875 MYH4Q9Y623 1939 aa21.61■■□□□ 1.05
CCDC12-213ENST00000605875 A0A1W2PQ45 241 aaPredicted RBP21.61■■□□□ 1.05
CCDC12-213ENST00000605875 A0A1W2PQY0 241 aa21.61■■□□□ 1.05
CCDC12-213ENST00000605875 PATL2C9JE40 543 aaKnown RBP21.61■■□□□ 1.05
CCDC12-213ENST00000605875 SLC4A3P48751 1232 aa21.61■■□□□ 1.05
CCDC12-213ENST00000605875 IRX6P78412 446 aaPredicted RBP21.61■■□□□ 1.05
CCDC12-213ENST00000605875 CHD1LQ86WJ1 897 aa21.61■■□□□ 1.05
CCDC12-213ENST00000605875 NACAP1Q9BZK3 213 aa21.61■■□□□ 1.05
CCDC12-213ENST00000605875 NAPBQ9H115 298 aa21.61■■□□□ 1.05
CCDC12-213ENST00000605875 CTDP1Q9Y5B0 961 aaPredicted RBP21.61■■□□□ 1.05
CCDC12-213ENST00000605875 PQBP1O60828 265 aaKnown RBP21.6■■□□□ 1.05
CCDC12-213ENST00000605875 ZBED4O75132 1171 aa21.6■■□□□ 1.05
CCDC12-213ENST00000605875 ADAMTS4O75173 837 aa21.6■■□□□ 1.05
CCDC12-213ENST00000605875 PRDM1O75626 825 aa21.6■■□□□ 1.05
CCDC12-213ENST00000605875 ITGB8P26012 769 aa21.6■■□□□ 1.05
CCDC12-213ENST00000605875 SMAD3P84022 425 aaKnown RBP21.6■■□□□ 1.05
CCDC12-213ENST00000605875 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.6■■□□□ 1.05
CCDC12-213ENST00000605875 ZNF444Q8N0Y2 327 aaPredicted RBP21.6■■□□□ 1.05
CCDC12-213ENST00000605875 CPXCR1Q8N123 301 aa21.6■■□□□ 1.05
CCDC12-213ENST00000605875 CDX2Q99626 313 aaPredicted RBP21.6■■□□□ 1.05
CCDC12-213ENST00000605875 TSEN34Q9BSV6 310 aaKnown RBP21.6■■□□□ 1.05
CCDC12-213ENST00000605875 SEMA6BQ9H3T3 888 aa21.6■■□□□ 1.05
CCDC12-213ENST00000605875 FAM184BQ9ULE4 1060 aa21.6■■□□□ 1.05
CCDC12-213ENST00000605875 SYNGAP1Q96PV0 1343 aa21.59■■□□□ 1.05
CCDC12-213ENST00000605875 IGKV6D-41A0A0C4DH26 115 aa21.59■■□□□ 1.05
CCDC12-213ENST00000605875 ATP2A1O14983 1001 aa21.59■■□□□ 1.05
CCDC12-213ENST00000605875 FOXP2O15409 715 aa21.59■■□□□ 1.05
CCDC12-213ENST00000605875 SNAI1O95863 264 aaPredicted RBP21.59■■□□□ 1.05
CCDC12-213ENST00000605875 RAG1P15918 1043 aa21.59■■□□□ 1.05
CCDC12-213ENST00000605875 NUCB1Q02818 461 aa21.59■■□□□ 1.05
CCDC12-213ENST00000605875 KIFC2Q96AC6 838 aa21.59■■□□□ 1.05
CCDC12-213ENST00000605875 ZNF287Q9HBT7 754 aa21.59■■□□□ 1.05
CCDC12-213ENST00000605875 SYNRGQ9UMZ2 1314 aa21.58■■□□□ 1.05
CCDC12-213ENST00000605875 DNAJC25-GNG10A0A024R161 153 aa21.58■■□□□ 1.05
CCDC12-213ENST00000605875 A0A0D9SFI3 127 aa21.58■■□□□ 1.05
CCDC12-213ENST00000605875 KIAA0355O15063 1070 aa21.58■■□□□ 1.05
CCDC12-213ENST00000605875 ACLYP53396 1101 aa21.58■■□□□ 1.05
CCDC12-213ENST00000605875 MAMDC4Q6UXC1 1216 aa21.58■■□□□ 1.05
CCDC12-213ENST00000605875 MKL1Q969V6 931 aa21.58■■□□□ 1.05
CCDC12-213ENST00000605875 FAM227BQ96M60 508 aa21.58■■□□□ 1.05
CCDC12-213ENST00000605875 RAVER2Q9HCJ3 691 aaKnown RBP21.58■■□□□ 1.05
CCDC12-213ENST00000605875 STARD7Q9NQZ5 370 aa21.58■■□□□ 1.05
CCDC12-213ENST00000605875 TMEM39AQ9NV64 488 aa21.58■■□□□ 1.05
CCDC12-213ENST00000605875 ZHX1Q9UKY1 873 aaPredicted RBP21.58■■□□□ 1.05
CCDC12-213ENST00000605875 A0A0C4DFX4 3053 aa21.58■■□□□ 1.04
CCDC12-213ENST00000605875 MOXD2PA6NHM9 499 aa21.57■■□□□ 1.04
CCDC12-213ENST00000605875 TRIM6-TRIM34B2RNG4 842 aa21.57■■□□□ 1.04
CCDC12-213ENST00000605875 PPARAQ07869 468 aa21.57■■□□□ 1.04
CCDC12-213ENST00000605875 VPS53Q5VIR6 699 aa21.57■■□□□ 1.04
CCDC12-213ENST00000605875 ZNF467Q7Z7K2 595 aaPredicted RBP21.57■■□□□ 1.04
CCDC12-213ENST00000605875 KLHDC9Q8NEP7 349 aa21.57■■□□□ 1.04
CCDC12-213ENST00000605875 NUP133Q8WUM0 1156 aa21.57■■□□□ 1.04
CCDC12-213ENST00000605875 CEP95Q96GE4 821 aa21.57■■□□□ 1.04
CCDC12-213ENST00000605875 RNPC3Q96LT9 517 aaKnown RBP21.57■■□□□ 1.04
CCDC12-213ENST00000605875 FEM1BQ9UK73 627 aa21.57■■□□□ 1.04
CCDC12-213ENST00000605875 DCDC2CA8MYV0 355 aa21.56■■□□□ 1.04
CCDC12-213ENST00000605875 EPHB4P54760 987 aa21.56■■□□□ 1.04
CCDC12-213ENST00000605875 KCNA10Q16322 511 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms