RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 A0A1W2PQY0 241 aa15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 GSG1L2A8MUP6 293 aa15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 MINDY4BA8MYZ0 360 aa15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 KIAA0355O15063 1070 aa15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 SMARCA5O60264 1052 aaPredicted RBP15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 RAG1P15918 1043 aa15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 SNRNP48Q6IEG0 339 aaKnown RBP15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 STK11IPQ8N1F8 1099 aa15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 NUP133Q8WUM0 1156 aa15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 NUP88Q99567 741 aaPredicted RBP15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 FAM184BQ9ULE4 1060 aa15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 RIPK3Q9Y572 518 aa15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 SYNGAP1Q96PV0 1343 aa15.37■□□□□ 0.05
NEK4P3-201ENST00000604859 ROBO3Q96MS0 1386 aa15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 DNAJC25-GNG10A0A024R161 153 aa15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 PQBP1O60828 265 aaKnown RBP15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 ADAMTS4O75173 837 aa15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 SNAI1O95863 264 aaPredicted RBP15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 NDUFB10O96000 172 aa15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 ACLYP53396 1101 aa15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 DIEXFQ68CQ4 756 aaKnown RBP15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 MAMDC4Q6UXC1 1216 aa15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 LENG1Q96BZ8 264 aaPredicted RBP15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 TOX2Q96NM4 488 aa15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 TTYH1Q9H313 450 aaPredicted RBP15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 ECHDC1Q9NTX5 307 aa15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 TMEM39AQ9NV64 488 aa15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 CLIP2Q9UDT6 1046 aa15.36■□□□□ 0.05
NEK4P3-201ENST00000604859 MOXD2PA6NHM9 499 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 DCDC2CA8MYV0 355 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 ATP2A1O14983 1001 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 ZBED4O75132 1171 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 SLC4A3P48751 1232 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 EPHB4P54760 987 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 FAAP100Q0VG06 881 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 KCNA10Q16322 511 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 ANKRD33Q7Z3H0 272 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 ZNF444Q8N0Y2 327 aaPredicted RBP15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 CPXCR1Q8N123 301 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 KBTBD3Q8NAB2 608 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 KLHDC9Q8NEP7 349 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 MAFAQ8NHW3 353 aaPredicted RBP15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 OSBP2Q969R2 916 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 MKL1Q969V6 931 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 RNPC3Q96LT9 517 aaKnown RBP15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 ZNF287Q9HBT7 754 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 STARD7Q9NQZ5 370 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 CTDP1Q9Y5B0 961 aaPredicted RBP15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 SYNRGQ9UMZ2 1314 aa15.35■□□□□ 0.05
NEK4P3-201ENST00000604859 PRUNE2Q8WUY3 3088 aa15.34■□□□□ 0.05
NEK4P3-201ENST00000604859 RNF113AO15541 343 aaKnown RBP15.34■□□□□ 0.05
NEK4P3-201ENST00000604859 DUSP11O75319 330 aaKnown RBP15.34■□□□□ 0.05
NEK4P3-201ENST00000604859 FPGSQ05932 587 aa15.34■□□□□ 0.05
NEK4P3-201ENST00000604859 CCSAPQ6IQ19 270 aaPredicted RBP15.34■□□□□ 0.05
NEK4P3-201ENST00000604859 ZNF467Q7Z7K2 595 aaPredicted RBP15.34■□□□□ 0.05
NEK4P3-201ENST00000604859 APPBP2Q92624 585 aa15.34■□□□□ 0.05
NEK4P3-201ENST00000604859 KIFC2Q96AC6 838 aa15.34■□□□□ 0.05
NEK4P3-201ENST00000604859 RCAN3Q9UKA8 241 aa15.34■□□□□ 0.05
NEK4P3-201ENST00000604859 MCM3APO60318 1980 aa15.34■□□□□ 0.05
NEK4P3-201ENST00000604859 IGKV6D-41A0A0C4DH26 115 aa15.33■□□□□ 0.04
NEK4P3-201ENST00000604859 GNAT2P19087 354 aa15.33■□□□□ 0.04
NEK4P3-201ENST00000604859 ACVR2BQ13705 512 aa15.33■□□□□ 0.04
NEK4P3-201ENST00000604859 ANKRD35Q8N283 1001 aa15.33■□□□□ 0.04
NEK4P3-201ENST00000604859 MYLIPQ8WY64 445 aa15.33■□□□□ 0.04
NEK4P3-201ENST00000604859 SLC38A10Q9HBR0 1119 aa15.33■□□□□ 0.04
NEK4P3-201ENST00000604859 RAVER2Q9HCJ3 691 aaKnown RBP15.33■□□□□ 0.04
NEK4P3-201ENST00000604859 FEM1BQ9UK73 627 aa15.33■□□□□ 0.04
NEK4P3-201ENST00000604859 ZHX1Q9UKY1 873 aaPredicted RBP15.33■□□□□ 0.04
NEK4P3-201ENST00000604859 TMEM265A0A087WTH1 108 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 GPAA1O43292 621 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 TIMP1P01033 207 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 APPP05067 770 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 ZFYP08048 801 aaPredicted RBP15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 TDO2P48775 406 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 C20orf194Q5TEA3 1177 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 PCSK9Q8NBP7 692 aaKnown RBP15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 CEP95Q96GE4 821 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 GPATCH3Q96I76 525 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 GLT1D1Q96MS3 346 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 ABHD16BQ9H3Z7 469 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 SPC25Q9HBM1 224 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 MTMR4Q9NYA4 1195 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 FBXO40Q9UH90 709 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 SYNPO2Q9UMS6 1093 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 ELP1O95163 1332 aa15.32■□□□□ 0.04
NEK4P3-201ENST00000604859 MYADML2A6NDP7 307 aa15.31■□□□□ 0.04
NEK4P3-201ENST00000604859 PATL2C9JE40 543 aaKnown RBP15.31■□□□□ 0.04
NEK4P3-201ENST00000604859 PRDM1O75626 825 aa15.31■□□□□ 0.04
NEK4P3-201ENST00000604859 TTLL1O95922 423 aa15.31■□□□□ 0.04
NEK4P3-201ENST00000604859 C6orf222P0C671 652 aaPredicted RBP15.31■□□□□ 0.04
NEK4P3-201ENST00000604859 FOSL2P15408 326 aa15.31■□□□□ 0.04
NEK4P3-201ENST00000604859 CST5P28325 142 aaPredicted RBP15.31■□□□□ 0.04
NEK4P3-201ENST00000604859 CDK7P50613 346 aa15.31■□□□□ 0.04
NEK4P3-201ENST00000604859 OAZ1P54368 228 aa15.31■□□□□ 0.04
NEK4P3-201ENST00000604859 CCDC144BQ3MJ40 725 aa15.31■□□□□ 0.04
NEK4P3-201ENST00000604859 IFNL3Q8IZI9 196 aa15.31■□□□□ 0.04
NEK4P3-201ENST00000604859 CHST13Q8NET6 341 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms