RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 FAAP100Q0VG06 881 aa20.22■□□□□ 0.83
CCDC12-210ENST00000604181 RNPC3Q96LT9 517 aaKnown RBP20.22■□□□□ 0.83
CCDC12-210ENST00000604181 STRBPQ96SI9 672 aaKnown RBP20.22■□□□□ 0.83
CCDC12-210ENST00000604181 DDX19BQ9UMR2 479 aa20.22■□□□□ 0.83
CCDC12-210ENST00000604181 CHD9Q3L8U1 2897 aa20.22■□□□□ 0.83
CCDC12-210ENST00000604181 SYNRGQ9UMZ2 1314 aa20.22■□□□□ 0.83
CCDC12-210ENST00000604181 DNAJC25-GNG10A0A024R161 153 aa20.21■□□□□ 0.83
CCDC12-210ENST00000604181 GSG1L2A8MUP6 293 aa20.21■□□□□ 0.83
CCDC12-210ENST00000604181 NDUFB10O96000 172 aa20.21■□□□□ 0.83
CCDC12-210ENST00000604181 SNRNP48Q6IEG0 339 aaKnown RBP20.21■□□□□ 0.83
CCDC12-210ENST00000604181 CCSAPQ6IQ19 270 aaPredicted RBP20.21■□□□□ 0.83
CCDC12-210ENST00000604181 AMOTL1Q8IY63 956 aa20.21■□□□□ 0.83
CCDC12-210ENST00000604181 KLHDC9Q8NEP7 349 aa20.21■□□□□ 0.83
CCDC12-210ENST00000604181 FGD4Q96M96 766 aa20.21■□□□□ 0.83
CCDC12-210ENST00000604181 SLF1Q9BQI6 1058 aa20.21■□□□□ 0.83
CCDC12-210ENST00000604181 RAG1P15918 1043 aa20.2■□□□□ 0.82
CCDC12-210ENST00000604181 ACLYP53396 1101 aa20.2■□□□□ 0.82
CCDC12-210ENST00000604181 OSBP2Q969R2 916 aa20.2■□□□□ 0.82
CCDC12-210ENST00000604181 TEX13BQ9BXU2 312 aa20.2■□□□□ 0.82
CCDC12-210ENST00000604181 EPB41L4AQ9HCS5 686 aaPredicted RBP20.2■□□□□ 0.82
CCDC12-210ENST00000604181 TMEM39AQ9NV64 488 aa20.2■□□□□ 0.82
CCDC12-210ENST00000604181 ARPP21Q9UBL0 812 aaPredicted RBP20.2■□□□□ 0.82
CCDC12-210ENST00000604181 MYH4Q9Y623 1939 aa20.19■□□□□ 0.82
CCDC12-210ENST00000604181 F5H6K3 240 aa20.19■□□□□ 0.82
CCDC12-210ENST00000604181 KLRC3Q07444 240 aa20.19■□□□□ 0.82
CCDC12-210ENST00000604181 KCNA10Q16322 511 aa20.19■□□□□ 0.82
CCDC12-210ENST00000604181 SBK1Q52WX2 424 aa20.19■□□□□ 0.82
CCDC12-210ENST00000604181 ANKRD33Q7Z3H0 272 aa20.19■□□□□ 0.82
CCDC12-210ENST00000604181 DDRGK1Q96HY6 314 aa20.19■□□□□ 0.82
CCDC12-210ENST00000604181 NYAP2Q9P242 653 aa20.19■□□□□ 0.82
CCDC12-210ENST00000604181 CNPY2Q9Y2B0 182 aa20.19■□□□□ 0.82
CCDC12-210ENST00000604181 CHD7Q9P2D1 2997 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 IGKV6D-41A0A0C4DH26 115 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 FOSL2P15408 326 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 COPB2P35606 906 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 SLC4A3P48751 1232 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 FPGSQ05932 587 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 C20orf194Q5TEA3 1177 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 TSHZ3Q63HK5 1081 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 MAMDC4Q6UXC1 1216 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 CPXCR1Q8N123 301 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 USP38Q8NB14 1042 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 TSEN34Q9BSV6 310 aaKnown RBP20.18■□□□□ 0.82
CCDC12-210ENST00000604181 STARD7Q9NQZ5 370 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 ZHX1Q9UKY1 873 aaPredicted RBP20.18■□□□□ 0.82
CCDC12-210ENST00000604181 SYNGAP1Q96PV0 1343 aa20.18■□□□□ 0.82
CCDC12-210ENST00000604181 MINDY4BA8MYZ0 360 aa20.17■□□□□ 0.82
CCDC12-210ENST00000604181 MS4A1P11836 297 aa20.17■□□□□ 0.82
CCDC12-210ENST00000604181 GRIN2CQ14957 1233 aa20.17■□□□□ 0.82
CCDC12-210ENST00000604181 TOX2Q96NM4 488 aa20.17■□□□□ 0.82
CCDC12-210ENST00000604181 LRRCC1Q9C099 1032 aa20.17■□□□□ 0.82
CCDC12-210ENST00000604181 RAVER2Q9HCJ3 691 aaKnown RBP20.17■□□□□ 0.82
CCDC12-210ENST00000604181 CLIP2Q9UDT6 1046 aa20.17■□□□□ 0.82
CCDC12-210ENST00000604181 TBX21Q9UL17 535 aa20.17■□□□□ 0.82
CCDC12-210ENST00000604181 FAM184BQ9ULE4 1060 aa20.17■□□□□ 0.82
CCDC12-210ENST00000604181 PRDM1O75626 825 aa20.16■□□□□ 0.82
CCDC12-210ENST00000604181 DNAJB2P25686 324 aa20.16■□□□□ 0.82
CCDC12-210ENST00000604181 ZSCAN25Q6NSZ9 544 aa20.16■□□□□ 0.82
CCDC12-210ENST00000604181 C16orf59Q7L2K0 433 aa20.16■□□□□ 0.82
CCDC12-210ENST00000604181 MSL3Q8N5Y2 521 aaKnown RBP20.16■□□□□ 0.82
CCDC12-210ENST00000604181 KIFC2Q96AC6 838 aa20.16■□□□□ 0.82
CCDC12-210ENST00000604181 DDX11Q96FC9 970 aa20.16■□□□□ 0.82
CCDC12-210ENST00000604181 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.16■□□□□ 0.829e-16■□□□□ 8.1
CCDC12-210ENST00000604181 MKNK2Q9HBH9 465 aa20.16■□□□□ 0.82
CCDC12-210ENST00000604181 ATP2A1O14983 1001 aa20.15■□□□□ 0.82
CCDC12-210ENST00000604181 DUSP11O75319 330 aaKnown RBP20.15■□□□□ 0.82
CCDC12-210ENST00000604181 CDK7P50613 346 aa20.15■□□□□ 0.82
CCDC12-210ENST00000604181 ACVR2BQ13705 512 aa20.15■□□□□ 0.82
CCDC12-210ENST00000604181 PRPF38AQ8NAV1 312 aaKnown RBP20.15■□□□□ 0.82
CCDC12-210ENST00000604181 CEP95Q96GE4 821 aa20.15■□□□□ 0.82
CCDC12-210ENST00000604181 SLC38A10Q9HBR0 1119 aa20.15■□□□□ 0.82
CCDC12-210ENST00000604181 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.15■□□□□ 0.82
CCDC12-210ENST00000604181 MOXD2PA6NHM9 499 aa20.14■□□□□ 0.81
CCDC12-210ENST00000604181 DCDC2CA8MYV0 355 aa20.14■□□□□ 0.81
CCDC12-210ENST00000604181 M0R2C6 588 aa20.14■□□□□ 0.81
CCDC12-210ENST00000604181 CTAGE5O15320 804 aa20.14■□□□□ 0.81
CCDC12-210ENST00000604181 TIMP1P01033 207 aa20.14■□□□□ 0.81
CCDC12-210ENST00000604181 PTGS1P23219 599 aa20.14■□□□□ 0.81
CCDC12-210ENST00000604181 CST5P28325 142 aaPredicted RBP20.14■□□□□ 0.81
CCDC12-210ENST00000604181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.14■□□□□ 0.81
CCDC12-210ENST00000604181 LRRC47Q8N1G4 583 aaKnown RBP20.14■□□□□ 0.81
CCDC12-210ENST00000604181 KBTBD3Q8NAB2 608 aa20.14■□□□□ 0.81
CCDC12-210ENST00000604181 NUP133Q8WUM0 1156 aa20.14■□□□□ 0.81
CCDC12-210ENST00000604181 KATNBL1Q9H079 304 aa20.14■□□□□ 0.81
CCDC12-210ENST00000604181 TMEM265A0A087WTH1 108 aa20.13■□□□□ 0.81
CCDC12-210ENST00000604181 GRXCR1A8MXD5 290 aa20.13■□□□□ 0.81
CCDC12-210ENST00000604181 GPAA1O43292 621 aa20.13■□□□□ 0.81
CCDC12-210ENST00000604181 ASGR1P07306 291 aa20.13■□□□□ 0.81
CCDC12-210ENST00000604181 C6orf222P0C671 652 aaPredicted RBP20.13■□□□□ 0.81
CCDC12-210ENST00000604181 CNTN2Q02246 1040 aa20.13■□□□□ 0.81
CCDC12-210ENST00000604181 CCDC144BQ3MJ40 725 aa20.13■□□□□ 0.81
CCDC12-210ENST00000604181 GIMAP6Q6P9H5 292 aa20.13■□□□□ 0.81
CCDC12-210ENST00000604181 ZNF467Q7Z7K2 595 aaPredicted RBP20.13■□□□□ 0.81
CCDC12-210ENST00000604181 APPBP2Q92624 585 aa20.13■□□□□ 0.81
CCDC12-210ENST00000604181 UPF3AQ9H1J1 476 aaKnown RBP20.13■□□□□ 0.81
CCDC12-210ENST00000604181 ECHDC1Q9NTX5 307 aa20.13■□□□□ 0.81
CCDC12-210ENST00000604181 MTMR4Q9NYA4 1195 aa20.13■□□□□ 0.81
CCDC12-210ENST00000604181 DDX49Q9Y6V7 483 aaKnown RBP20.13■□□□□ 0.81
CCDC12-210ENST00000604181 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.12■□□□□ 0.81
CCDC12-210ENST00000604181 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms