RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 OAZ1P54368 228 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 IKQ13123 557 aaPredicted RBP16.21■□□□□ 0.19
RNF40-212ENST00000602784 TMEM132BQ14DG7 1078 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 PKN2Q16513 984 aaKnown RBP16.21■□□□□ 0.19
RNF40-212ENST00000602784 TTBK2Q6IQ55 1244 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 NFXL1Q6ZNB6 911 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 RUFY3Q7L099 469 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 RASGRP2Q7LDG7 609 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 CTU1Q7Z7A3 348 aaKnown RBP16.21■□□□□ 0.19
RNF40-212ENST00000602784 ZNF654Q8IZM8 581 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 SHCBP1Q8NEM2 672 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 TRIM47Q96LD4 638 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 SPATC1LQ9H0A9 340 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 EFCC1Q9HA90 598 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 GPCPD1Q9NPB8 672 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 ZNF214Q9UL59 606 aaPredicted RBP16.21■□□□□ 0.19
RNF40-212ENST00000602784 PRR12Q9ULL5 1215 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 CYP46A1Q9Y6A2 500 aa16.21■□□□□ 0.19
RNF40-212ENST00000602784 FRMPD2Q68DX3 1309 aaPredicted RBP16.2■□□□□ 0.18
RNF40-212ENST00000602784 PALM3A6NDB9 673 aaPredicted RBP16.2■□□□□ 0.18
RNF40-212ENST00000602784 FMNL1O95466 1100 aaPredicted RBP16.2■□□□□ 0.18
RNF40-212ENST00000602784 CALM1P0DP23 149 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 CALM2P0DP24 149 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 CALM3P0DP25 149 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 HOXD10P28358 340 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 CTGFP29279 349 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 COPB2P35606 906 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 PRMT2P55345 433 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 CAP1Q01518 475 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 GRM4Q14833 912 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 SYDE2Q5VT97 1194 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
RNF40-212ENST00000602784 OTOP1Q7RTM1 612 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 MOV10L1Q9BXT6 1211 aaKnown RBP16.2■□□□□ 0.18
RNF40-212ENST00000602784 LRRC2Q9BYS8 371 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 AGXT2Q9BYV1 514 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 ARHGAP39Q9C0H5 1083 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 CTDP1Q9Y5B0 961 aaPredicted RBP16.2■□□□□ 0.18
RNF40-212ENST00000602784 SLC12A7Q9Y666 1083 aa16.2■□□□□ 0.18
RNF40-212ENST00000602784 PEX10O60683 326 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 SLC25A27O95847 323 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 KIF5BP33176 963 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 SLC16A2P36021 539 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 STAT3P40763 770 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 RCAN1P53805 252 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 RIOX2Q8IUF8 465 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 CCAR1Q8IX12 1150 aaKnown RBP16.19■□□□□ 0.18
RNF40-212ENST00000602784 COA7Q96BR5 231 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 TCEANC2Q96MN5 208 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 TEX13BQ9BXU2 312 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 PORCNQ9H237 461 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 RANBP17Q9H2T7 1088 aaKnown RBP16.19■□□□□ 0.18
RNF40-212ENST00000602784 MROH8Q9H579 483 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 MAD2L2Q9UI95 211 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 PNMA2Q9UL42 364 aa16.19■□□□□ 0.18
RNF40-212ENST00000602784 KLRF2D3W0D1 207 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 TNPO2O14787 897 aaKnown RBP16.18■□□□□ 0.18
RNF40-212ENST00000602784 GOLGA8HP0CJ92 632 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 CPA1P15085 419 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 SMARCA1P28370 1054 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 FGD1P98174 961 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 PLS1Q14651 629 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 SYNE3Q6ZMZ3 975 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 Q6ZUG5 572 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 STAG2Q8N3U4 1231 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 LZTS2Q9BRK4 669 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 ALDH8A1Q9H2A2 487 aaPredicted RBP16.18■□□□□ 0.18
RNF40-212ENST00000602784 UPF2Q9HAU5 1272 aaKnown RBP16.18■□□□□ 0.18
RNF40-212ENST00000602784 SRRDQ9UH36 339 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 TRIM17Q9Y577 477 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 MGAMO43451 1857 aa16.18■□□□□ 0.18
RNF40-212ENST00000602784 COL11A1P12107 1806 aaPredicted RBP16.17■□□□□ 0.18
RNF40-212ENST00000602784 STRNO43815 780 aa16.17■□□□□ 0.18
RNF40-212ENST00000602784 RBM25P49756 843 aaKnown RBP16.17■□□□□ 0.18
RNF40-212ENST00000602784 GNAQP50148 359 aa16.17■□□□□ 0.18
RNF40-212ENST00000602784 EVCP57679 992 aa16.17■□□□□ 0.18
RNF40-212ENST00000602784 APOA5Q6Q788 366 aa16.17■□□□□ 0.18
RNF40-212ENST00000602784 GPR142Q7Z601 462 aa16.17■□□□□ 0.18
RNF40-212ENST00000602784 PLEKHH3Q7Z736 793 aa16.17■□□□□ 0.18
RNF40-212ENST00000602784 FANCBQ8NB91 859 aa16.17■□□□□ 0.18
RNF40-212ENST00000602784 CTCFLQ8NI51 663 aaPredicted RBP16.17■□□□□ 0.18
RNF40-212ENST00000602784 C22orf23Q9BZE7 217 aa16.17■□□□□ 0.18
RNF40-212ENST00000602784 ZNF536O15090 1300 aa16.17■□□□□ 0.18
RNF40-212ENST00000602784 ICAM1P05362 532 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 ERCC3P19447 782 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 PPP2R5BQ15173 497 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 TKFCQ3LXA3 575 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 SNRNP48Q6IEG0 339 aaKnown RBP16.16■□□□□ 0.18
RNF40-212ENST00000602784 ADGRF4Q8IZF3 695 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 ABRAQ8N0Z2 381 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 CPXCR1Q8N123 301 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 NUP133Q8WUM0 1156 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 BRF1Q92994 677 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 BACH2Q9BYV9 841 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 UPF3BQ9BZI7 483 aaKnown RBP16.16■□□□□ 0.18
RNF40-212ENST00000602784 UBA5Q9GZZ9 404 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 RIOX1Q9H6W3 641 aa16.16■□□□□ 0.18
RNF40-212ENST00000602784 RAVER2Q9HCJ3 691 aaKnown RBP16.16■□□□□ 0.18
RNF40-212ENST00000602784 GJD2Q9UKL4 321 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms