RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 ZNF236Q9UL36 1845 aa15.03■□□□□ -0
USE1-209ENST00000601592 SLC27A2O14975 620 aa15.03■□□□□ -0
USE1-209ENST00000601592 STAT3P40763 770 aa15.03■□□□□ -0
USE1-209ENST00000601592 RGS2P41220 211 aa15.03■□□□□ -0
USE1-209ENST00000601592 UBXN2AP68543 259 aa15.03■□□□□ -0
USE1-209ENST00000601592 IRF5Q13568 498 aa15.03■□□□□ -0
USE1-209ENST00000601592 IFIT1BQ5T764 474 aaKnown RBP15.03■□□□□ -0
USE1-209ENST00000601592 CREB3L3Q68CJ9 461 aa15.03■□□□□ -0
USE1-209ENST00000601592 SNRNP48Q6IEG0 339 aaKnown RBP15.03■□□□□ -0
USE1-209ENST00000601592 STOX1Q6ZVD7 989 aa15.03■□□□□ -0
USE1-209ENST00000601592 DGKHQ86XP1 1220 aa15.03■□□□□ -0
USE1-209ENST00000601592 ENAHQ8N8S7 591 aaPredicted RBP15.03■□□□□ -0
USE1-209ENST00000601592 PNMA1Q8ND90 353 aa15.03■□□□□ -0
USE1-209ENST00000601592 ZNF333Q96JL9 665 aa15.03■□□□□ -0
USE1-209ENST00000601592 GJD2Q9UKL4 321 aa15.03■□□□□ -0
USE1-209ENST00000601592 ADAMTS5Q9UNA0 930 aa15.03■□□□□ -0
USE1-209ENST00000601592 ERICH2A1L162 156 aa15.02■□□□□ -0
USE1-209ENST00000601592 SLC15A5A6NIM6 579 aa15.02■□□□□ -0
USE1-209ENST00000601592 SLC25A27O95847 323 aa15.02■□□□□ -0
USE1-209ENST00000601592 INHAP05111 366 aa15.02■□□□□ -0
USE1-209ENST00000601592 PDHBP11177 359 aa15.02■□□□□ -0
USE1-209ENST00000601592 PTPREP23469 700 aa15.02■□□□□ -0
USE1-209ENST00000601592 SLC16A2P36021 539 aa15.02■□□□□ -0
USE1-209ENST00000601592 SART3Q15020 963 aaKnown RBP15.02■□□□□ -0
USE1-209ENST00000601592 MORN1Q5T089 497 aa15.02■□□□□ -0
USE1-209ENST00000601592 RNF20Q5VTR2 975 aa15.02■□□□□ -0
USE1-209ENST00000601592 CHST3Q7LGC8 479 aa15.02■□□□□ -0
USE1-209ENST00000601592 SHCBP1Q8NEM2 672 aa15.02■□□□□ -0
USE1-209ENST00000601592 REPS2Q8NFH8 660 aa15.02■□□□□ -0
USE1-209ENST00000601592 TMEM106CQ9BVX2 250 aa15.02■□□□□ -0
USE1-209ENST00000601592 TEX13BQ9BXU2 312 aa15.02■□□□□ -0
USE1-209ENST00000601592 MROH8Q9H579 483 aa15.02■□□□□ -0
USE1-209ENST00000601592 RAVER2Q9HCJ3 691 aaKnown RBP15.02■□□□□ -0
USE1-209ENST00000601592 ZNF214Q9UL59 606 aaPredicted RBP15.02■□□□□ -0
USE1-209ENST00000601592 SMCHD1A6NHR9 2005 aa15.02□□□□□ -0.01
USE1-209ENST00000601592 IFIT3O14879 490 aaKnown RBP15.01□□□□□ -0.01
USE1-209ENST00000601592 ZKSCAN1P17029 563 aaPredicted RBP15.01□□□□□ -0.01
USE1-209ENST00000601592 SNAP25P60880 206 aa15.01□□□□□ -0.01
USE1-209ENST00000601592 MAP2K5Q13163 448 aa15.01□□□□□ -0.01
USE1-209ENST00000601592 MTFR1Q15390 333 aa15.01□□□□□ -0.01
USE1-209ENST00000601592 TTBK2Q6IQ55 1244 aa15.01□□□□□ -0.01
USE1-209ENST00000601592 CCDC174Q6PII3 467 aa15.01□□□□□ -0.01
USE1-209ENST00000601592 RIOX2Q8IUF8 465 aa15.01□□□□□ -0.01
USE1-209ENST00000601592 PXYLP1Q8TE99 480 aa15.01□□□□□ -0.01
USE1-209ENST00000601592 APBA2Q99767 749 aa15.01□□□□□ -0.01
USE1-209ENST00000601592 SLC38A10Q9HBR0 1119 aa15.01□□□□□ -0.01
USE1-209ENST00000601592 PRR12Q9ULL5 1215 aa15.01□□□□□ -0.01
USE1-209ENST00000601592 HMGCRP04035 888 aa15□□□□□ -0.01
USE1-209ENST00000601592 GOLGA8HP0CJ92 632 aa15□□□□□ -0.01
USE1-209ENST00000601592 FCER1AP12319 257 aa15□□□□□ -0.01
USE1-209ENST00000601592 ADORA2AP29274 412 aa15□□□□□ -0.01
USE1-209ENST00000601592 COPB2P35606 906 aa15□□□□□ -0.01
USE1-209ENST00000601592 ZNF543Q08ER8 600 aa15□□□□□ -0.01
USE1-209ENST00000601592 GRB14Q14449 540 aa15□□□□□ -0.01
USE1-209ENST00000601592 NECTIN1Q15223 517 aa15□□□□□ -0.01
USE1-209ENST00000601592 TMEM67Q5HYA8 995 aa15□□□□□ -0.01
USE1-209ENST00000601592 SYDE2Q5VT97 1194 aa15□□□□□ -0.01
USE1-209ENST00000601592 DPP9Q86TI2 863 aa15□□□□□ -0.01
USE1-209ENST00000601592 MMP19Q99542 508 aa15□□□□□ -0.01
USE1-209ENST00000601592 HOMER2Q9NSB8 354 aa15□□□□□ -0.01
USE1-209ENST00000601592 POTEFA5A3E0 1075 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 STRNO43815 780 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 PLA2G6O60733 806 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 FDX1P10109 184 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 CCL5P13501 91 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 WTAPQ15007 396 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 SEC23AQ15436 765 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 CCL14Q16627 93 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 MB21D2Q8IYB1 491 aaPredicted RBP14.99□□□□□ -0.01
USE1-209ENST00000601592 TRIB2Q92519 343 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 ANKS1AQ92625 1134 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 USP6NLQ92738 828 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 RNF208Q9H0X6 261 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 RIPK3Q9Y572 518 aa14.99□□□□□ -0.01
USE1-209ENST00000601592 MCM3APO60318 1980 aa14.98□□□□□ -0.01
USE1-209ENST00000601592 PRC1O43663 620 aa14.98□□□□□ -0.01
USE1-209ENST00000601592 DHX16O60231 1041 aaKnown RBP14.98□□□□□ -0.01
USE1-209ENST00000601592 REC8O95072 547 aa14.98□□□□□ -0.01
USE1-209ENST00000601592 PARP1P09874 1014 aaKnown RBP14.98□□□□□ -0.01
USE1-209ENST00000601592 XRCC5P13010 732 aaKnown RBP14.98□□□□□ -0.01
USE1-209ENST00000601592 MCM5P33992 734 aa14.98□□□□□ -0.01
USE1-209ENST00000601592 TRIM32Q13049 653 aa14.98□□□□□ -0.01
USE1-209ENST00000601592 KCTD2Q14681 263 aa14.98□□□□□ -0.01
USE1-209ENST00000601592 GPATCH4Q5T3I0 446 aaKnown RBP14.98□□□□□ -0.01
USE1-209ENST00000601592 TRMT44Q8IYL2 757 aaKnown RBP14.98□□□□□ -0.01
USE1-209ENST00000601592 NPLOC4Q8TAT6 608 aa14.98□□□□□ -0.01
USE1-209ENST00000601592 UNC93B1Q9H1C4 597 aa14.98□□□□□ -0.01
USE1-209ENST00000601592 CPVLQ9H3G5 476 aa14.98□□□□□ -0.01
USE1-209ENST00000601592 SLC5A4Q9NY91 659 aa14.98□□□□□ -0.01
USE1-209ENST00000601592 BAZ2BQ9UIF8 2168 aaKnown RBP14.98□□□□□ -0.01
USE1-209ENST00000601592 SNHG28P0DPA3 235 aa14.97□□□□□ -0.01
USE1-209ENST00000601592 ALAS1P13196 640 aa14.97□□□□□ -0.01
USE1-209ENST00000601592 OAZ1P54368 228 aa14.97□□□□□ -0.01
USE1-209ENST00000601592 ANTXR2P58335 489 aa14.97□□□□□ -0.01
USE1-209ENST00000601592 ASPRV1Q53RT3 343 aa14.97□□□□□ -0.01
USE1-209ENST00000601592 NFXL1Q6ZNB6 911 aa14.97□□□□□ -0.01
USE1-209ENST00000601592 AGBL1Q96MI9 1066 aa14.97□□□□□ -0.01
USE1-209ENST00000601592 UBA5Q9GZZ9 404 aa14.97□□□□□ -0.01
USE1-209ENST00000601592 SENP2Q9HC62 589 aa14.97□□□□□ -0.01
USE1-209ENST00000601592 CCPG1Q9ULG6 757 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms