RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
IRF3-229ENST00000601373 TMX2Q9Y320 296 aa15.77■□□□□ 0.12
IRF3-229ENST00000601373 MYH15Q9Y2K3 1946 aa15.76■□□□□ 0.11
IRF3-229ENST00000601373 BAZ2BQ9UIF8 2168 aaKnown RBP15.76■□□□□ 0.11
IRF3-229ENST00000601373 ASTN2O75129 1339 aaPredicted RBP15.76■□□□□ 0.11
IRF3-229ENST00000601373 FRMPD2Q68DX3 1309 aaPredicted RBP15.76■□□□□ 0.11
IRF3-229ENST00000601373 PHF20L1A8MW92 1017 aa15.76■□□□□ 0.11
IRF3-229ENST00000601373 YEATS4O95619 227 aa15.76■□□□□ 0.11
IRF3-229ENST00000601373 EPHX2P34913 555 aa15.76■□□□□ 0.11
IRF3-229ENST00000601373 HIRAP54198 1017 aaPredicted RBP15.76■□□□□ 0.11
IRF3-229ENST00000601373 SLC35G1Q2M3R5 365 aa15.76■□□□□ 0.11
IRF3-229ENST00000601373 SUPT20HL1Q3ZLR7 823 aa15.76■□□□□ 0.11
IRF3-229ENST00000601373 EAPPQ56P03 285 aaPredicted RBP15.76■□□□□ 0.11
IRF3-229ENST00000601373 RILPL1Q5EBL4 403 aa15.76■□□□□ 0.11
IRF3-229ENST00000601373 UBA5Q9GZZ9 404 aa15.76■□□□□ 0.11
IRF3-229ENST00000601373 GOPCQ9HD26 462 aa15.76■□□□□ 0.11
IRF3-229ENST00000601373 BARHL2Q9NY43 387 aa15.76■□□□□ 0.11
IRF3-229ENST00000601373 GGA3Q9NZ52 723 aa15.76■□□□□ 0.11
IRF3-229ENST00000601373 NASPP49321 788 aaPredicted RBP15.75■□□□□ 0.11
IRF3-229ENST00000601373 SHROOM1Q2M3G4 852 aaPredicted RBP15.75■□□□□ 0.11
IRF3-229ENST00000601373 NBPF12Q5TAG4 269 aaPredicted RBP15.75■□□□□ 0.11
IRF3-229ENST00000601373 GPT2Q8TD30 523 aa15.75■□□□□ 0.11
IRF3-229ENST00000601373 PIBF1Q8WXW3 757 aa15.75■□□□□ 0.11
IRF3-229ENST00000601373 SYAP1Q96A49 352 aaPredicted RBP15.75■□□□□ 0.11
IRF3-229ENST00000601373 ABHD8Q96I13 439 aa15.75■□□□□ 0.11
IRF3-229ENST00000601373 VAT1LQ9HCJ6 419 aa15.75■□□□□ 0.11
IRF3-229ENST00000601373 PNMA6FA0A0J9YX94 578 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 GADD45BO75293 160 aaPredicted RBP15.74■□□□□ 0.11
IRF3-229ENST00000601373 NDUFB10O96000 172 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 BMP3P12645 472 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 STK38Q15208 465 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 ANO1Q5XXA6 986 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 WWC2Q6AWC2 1192 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 USP50Q70EL3 339 aaPredicted RBP15.74■□□□□ 0.11
IRF3-229ENST00000601373 RASGRP2Q7LDG7 609 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 HEATR3Q7Z4Q2 680 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 DAGLBQ8NCG7 672 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 KCNG4Q8TDN1 519 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 DCPSQ96C86 337 aaKnown RBP15.74■□□□□ 0.11
IRF3-229ENST00000601373 PIGSQ96S52 555 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 ZNF112Q9UJU3 913 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 PCDHA4Q9UN74 947 aa15.74■□□□□ 0.11
IRF3-229ENST00000601373 A0A1W2PRG0 241 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 ESYT2A0FGR8 921 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 STXBP3O00186 592 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 RAD21O60216 631 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 HSPA8P11142 646 aaKnown RBP15.73■□□□□ 0.11
IRF3-229ENST00000601373 GNA11P29992 359 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 ECE1P42892 770 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 CEBPZQ03701 1054 aaKnown RBP15.73■□□□□ 0.11
IRF3-229ENST00000601373 SF3A1Q15459 793 aaKnown RBP15.73■□□□□ 0.11
IRF3-229ENST00000601373 BTNL9Q6UXG8 535 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 KCTD1Q719H9 257 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 HOMER1Q86YM7 354 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 ADGRF4Q8IZF3 695 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 BLIDQ8IZY5 108 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 LINC00301Q8NCQ3 95 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 ZC3H15Q8WU90 426 aaKnown RBP15.73■□□□□ 0.11
IRF3-229ENST00000601373 SHISA4Q96DD7 197 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 MTMR8Q96EF0 704 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 BEGAINQ9BUH8 593 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 CPVLQ9H3G5 476 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 VCPKMTQ9H867 229 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 JMJD4Q9H9V9 463 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 C6orf50Q9HD87 102 aa15.73■□□□□ 0.11
IRF3-229ENST00000601373 NOL7Q9UMY1 257 aaKnown RBP15.73■□□□□ 0.11
IRF3-229ENST00000601373 SCAF8Q9UPN6 1271 aaKnown RBP15.73■□□□□ 0.11
IRF3-229ENST00000601373 ZBTB5O15062 677 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 SPTLC2O15270 562 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 TRAPPC10P48553 1259 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 NAPAP54920 295 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 NR5A1Q13285 461 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 SLC39A14Q15043 492 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 NPY5RQ15761 445 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 TTBK2Q6IQ55 1244 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 PPP1R18Q6NYC8 613 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 BICD2Q8TD16 824 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 ACER1Q8TDN7 264 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 OXER1Q8TDS5 423 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 GPKOWQ92917 476 aaPredicted RBP eCLIP15.72■□□□□ 0.11
IRF3-229ENST00000601373 ZMYND12Q9H0C1 365 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 ISY1Q9ULR0 285 aaKnown RBP15.72■□□□□ 0.11
IRF3-229ENST00000601373 ABT1Q9ULW3 272 aaKnown RBP15.72■□□□□ 0.11
IRF3-229ENST00000601373 CEP131Q9UPN4 1083 aa15.72■□□□□ 0.11
IRF3-229ENST00000601373 PLA2G6O60733 806 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 PPP6R2O75170 966 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 BMP15O95972 392 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 TRAF1Q13077 416 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 GSE1Q14687 1217 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 CAVIN1Q6NZI2 390 aaKnown RBP15.71■□□□□ 0.11
IRF3-229ENST00000601373 SULF1Q8IWU6 871 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 SCYL3Q8IZE3 742 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 CHURC1Q8WUH1 139 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 TNFRSF25Q93038 417 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 GLT8D2Q9H1C3 349 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 AS3MTQ9HBK9 375 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 PCDH10Q9P2E7 1040 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 CLIC4Q9Y696 253 aa15.71■□□□□ 0.11
IRF3-229ENST00000601373 SMCO2A6NFE2 343 aa15.7■□□□□ 0.1
IRF3-229ENST00000601373 SLC16A2P36021 539 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms