RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 ZNRF3Q9ULT6 936 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 CEP350Q5VT06 3117 aa6.55□□□□□ -1.36
VRK3-222ENST00000601324 NUP188Q5SRE5 1749 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 FAM95CA0A1B0GW59 222 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 NFICP08651 508 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 IMPDH2P12268 514 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 DNAJA1P31689 397 aaKnown RBP6.54□□□□□ -1.36
VRK3-222ENST00000601324 CAP2P40123 477 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 BEND4Q6ZU67 534 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 UBE3DQ7Z6J8 389 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 CLEC10AQ8IUN9 316 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.54□□□□□ -1.36
VRK3-222ENST00000601324 MRPL41Q8IXM3 137 aaKnown RBP6.54□□□□□ -1.36
VRK3-222ENST00000601324 FERD3LQ96RJ6 166 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 FBRSQ9HAH7 460 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 SSU72Q9NP77 194 aaKnown RBP6.54□□□□□ -1.36
VRK3-222ENST00000601324 PPT2Q9UMR5 302 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 RAXQ9Y2V3 346 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 DAGLAQ9Y4D2 1042 aa6.54□□□□□ -1.36
VRK3-222ENST00000601324 ABCA3Q99758 1704 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 SPATA31A5Q5VU36 1347 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 SPATA31A7Q8IWB4 1347 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 TECPR2O15040 1411 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 KCNQ2O43526 872 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 PROCP04070 461 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 FGRP09769 529 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 PAOXQ6QHF9 649 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 MCF2L2Q86YR7 1114 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 ACSF2Q96CM8 615 aaPredicted RBP6.53□□□□□ -1.36
VRK3-222ENST00000601324 TMEM87BQ96K49 555 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 SPOCK3Q9BQ16 436 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 FAM83CQ9BQN1 747 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.53□□□□□ -1.36
VRK3-222ENST00000601324 GMIPQ9P107 970 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 TJP2Q9UDY2 1190 aa6.53□□□□□ -1.36
VRK3-222ENST00000601324 NAIPQ13075 1403 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 TNS3Q68CZ2 1445 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 MSTNO14793 375 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 SF3A1Q15459 793 aaKnown RBP6.52□□□□□ -1.37
VRK3-222ENST00000601324 NKG7Q16617 165 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 LRRFIP1Q32MZ4 808 aaKnown RBP6.52□□□□□ -1.37
VRK3-222ENST00000601324 SLC6A19Q695T7 634 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 SEZ6L2Q6UXD5 910 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 PRR23CQ6ZRP0 262 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 MCATQ8IVS2 390 aaKnown RBP6.52□□□□□ -1.37
VRK3-222ENST00000601324 SREK1Q8WXA9 508 aaKnown RBP6.52□□□□□ -1.37
VRK3-222ENST00000601324 SRRTQ9BXP5 876 aaKnown RBP6.52□□□□□ -1.37
VRK3-222ENST00000601324 TANGO6Q9C0B7 1094 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 C7orf69Q9H7B7 122 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 SPON1Q9HCB6 807 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 STOML1Q9UBI4 398 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 PRKAG2Q9UGJ0 569 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 SBNO1A3KN83 1393 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 LRPPRCP42704 1394 aaKnown RBP6.52□□□□□ -1.37
VRK3-222ENST00000601324 CASZ1Q86V15 1759 aa6.52□□□□□ -1.37
VRK3-222ENST00000601324 CCDC144AA2RUR9 1427 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 MEIS3P2A8K0S8 358 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 DYNC1LI2O43237 492 aaPredicted RBP6.51□□□□□ -1.37
VRK3-222ENST00000601324 LRIG2O94898 1065 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 CST3P01034 146 aaPredicted RBP6.51□□□□□ -1.37
VRK3-222ENST00000601324 IGHA1P01876 353 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 YARSP54577 528 aaKnown RBP6.51□□□□□ -1.37
VRK3-222ENST00000601324 DOC2BQ14184 412 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 SLBPQ14493 270 aaKnown RBP eCLIP6.51□□□□□ -1.37
VRK3-222ENST00000601324 NFKBIBQ15653 356 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 FBXW10Q5XX13 1052 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 GPAT2Q6NUI2 795 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 CCDC81Q6ZN84 652 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 KRT28Q7Z3Y7 464 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 RBBP8NLQ8NC74 664 aaPredicted RBP6.51□□□□□ -1.37
VRK3-222ENST00000601324 CPLX3Q8WVH0 158 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 TMEM40Q8WWA1 233 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 FOXQ1Q9C009 403 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 LGR6Q9HBX8 967 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 KLHL3Q9UH77 587 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 ADGRB2O60241 1585 aa6.51□□□□□ -1.37
VRK3-222ENST00000601324 SLC22A31A6NKX4 558 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 DNAJA2O60884 412 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 SSBP05455 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
VRK3-222ENST00000601324 H2AFB1P0C5Y9 115 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 H2AFB2P0C5Z0 115 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 EIF6P56537 245 aaKnown RBP6.5□□□□□ -1.37
VRK3-222ENST00000601324 PRAMEF13Q5VWM6 474 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 OVOS1Q6IE37 1185 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 ARMCX6Q7L4S7 300 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 SLFN12Q8IYM2 578 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 FAM13CQ8NE31 585 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 OR6P1Q8NGX9 317 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 SHDQ96IW2 340 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 PSMG3-AS1Q96PY0 264 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 CRBNQ96SW2 442 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 PDGFDQ9GZP0 370 aaPredicted RBP6.5□□□□□ -1.37
VRK3-222ENST00000601324 C1GALT1Q9NS00 363 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 CLTCL1P53675 1640 aa6.5□□□□□ -1.37
VRK3-222ENST00000601324 RRBP1Q9P2E9 1410 aaKnown RBP6.5□□□□□ -1.37
VRK3-222ENST00000601324 NRKQ7Z2Y5 1582 aa6.49□□□□□ -1.37
VRK3-222ENST00000601324 NRXN1Q9ULB1 1477 aa6.49□□□□□ -1.37
VRK3-222ENST00000601324 PLEKHH1Q9ULM0 1364 aa6.49□□□□□ -1.37
VRK3-222ENST00000601324 HMX2A2RU54 273 aa6.49□□□□□ -1.37
VRK3-222ENST00000601324 ATP2B1P20020 1258 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms