RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 MSRAQ9UJ68 235 aa12.05□□□□□ -0.48
HIF3A-219ENST00000600879 CNPY2Q9Y2B0 182 aa12.05□□□□□ -0.48
HIF3A-219ENST00000600879 CHD7Q9P2D1 2997 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 CYP2D7A0A087X1C5 515 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 RBAK-RBAKDNI3L0D1 243 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 WDR46O15213 610 aaKnown RBP12.04□□□□□ -0.48
HIF3A-219ENST00000600879 IGSF3O75054 1194 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 PDE6AP16499 860 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 ATP8B2P98198 1209 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 CCSAPQ6IQ19 270 aaPredicted RBP12.04□□□□□ -0.48
HIF3A-219ENST00000600879 RIOX2Q8IUF8 465 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 LCORLQ8N3X6 602 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 KLHDC9Q8NEP7 349 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 TOX2Q96NM4 488 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 TSEN34Q9BSV6 310 aaKnown RBP12.04□□□□□ -0.48
HIF3A-219ENST00000600879 C1QTNF1Q9BXJ1 281 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 SLC28A3Q9HAS3 691 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 TMX2Q9Y320 296 aa12.04□□□□□ -0.48
HIF3A-219ENST00000600879 IPO8O15397 1037 aaKnown RBP12.03□□□□□ -0.48
HIF3A-219ENST00000600879 PRKAB2O43741 272 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 SNAI1O95863 264 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-219ENST00000600879 ASGR1P07306 291 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 C6orf222P0C671 652 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-219ENST00000600879 STAT3P40763 770 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 CCL23P55773 120 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 RAB30Q15771 203 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 SLFNL1Q499Z3 407 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 SLC9C2Q5TAH2 1124 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 AACSQ86V21 672 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 TMEM199Q8N511 208 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 SH2D4AQ9H788 454 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 ARMT1Q9H993 441 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 DCP1AQ9NPI6 582 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-219ENST00000600879 FAM184BQ9ULE4 1060 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 HCN4Q9Y3Q4 1203 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 ZNF532Q9HCE3 1301 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 ROBO3Q96MS0 1386 aa12.03□□□□□ -0.48
HIF3A-219ENST00000600879 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.48
HIF3A-219ENST00000600879 ZNFX1Q9P2E3 1918 aaKnown RBP12.02□□□□□ -0.49
HIF3A-219ENST00000600879 MOXD2PA6NHM9 499 aa12.02□□□□□ -0.49
HIF3A-219ENST00000600879 VWA5AO00534 786 aa12.02□□□□□ -0.49
HIF3A-219ENST00000600879 EEF2P13639 858 aaKnown RBP12.02□□□□□ -0.49
HIF3A-219ENST00000600879 CDK7P50613 346 aa12.02□□□□□ -0.49
HIF3A-219ENST00000600879 BEX3Q00994 111 aa12.02□□□□□ -0.49
HIF3A-219ENST00000600879 FAM83BQ5T0W9 1011 aa12.02□□□□□ -0.49
HIF3A-219ENST00000600879 PPP2R2DQ66LE6 453 aa12.02□□□□□ -0.49
HIF3A-219ENST00000600879 PSRC1Q6PGN9 363 aaPredicted RBP12.02□□□□□ -0.49
HIF3A-219ENST00000600879 CCDC174Q6PII3 467 aa12.02□□□□□ -0.49
HIF3A-219ENST00000600879 ALYREFQ86V81 257 aaKnown RBP12.02□□□□□ -0.49
HIF3A-219ENST00000600879 FAM126BQ8IXS8 530 aa12.02□□□□□ -0.49
HIF3A-219ENST00000600879 HERVK_113Q902F9 699 aa12.02□□□□□ -0.49
HIF3A-219ENST00000600879 GLT1D1Q96MS3 346 aa12.02□□□□□ -0.49
HIF3A-219ENST00000600879 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.49
HIF3A-219ENST00000600879 NUP88Q99567 741 aaPredicted RBP12.02□□□□□ -0.49
HIF3A-219ENST00000600879 ZNF214Q9UL59 606 aaPredicted RBP12.02□□□□□ -0.49
HIF3A-219ENST00000600879 EXOC6BQ9Y2D4 811 aa12.02□□□□□ -0.49
HIF3A-219ENST00000600879 DIS3Q9Y2L1 958 aaKnown RBP12.02□□□□□ -0.49
HIF3A-219ENST00000600879 EPOPA6NHQ4 379 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 FGBP02675 491 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 REPS2Q8NFH8 660 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 DDX11Q96FC9 970 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 TSPYL2Q9H2G4 693 aaPredicted RBP12.01□□□□□ -0.49
HIF3A-219ENST00000600879 IL1RAPL2Q9NP60 686 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 IL23AQ9NPF7 189 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 C11orf16Q9NQ32 467 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 SWAP70Q9UH65 585 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 ADAMTS5Q9UNA0 930 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
HIF3A-219ENST00000600879 RIPK3Q9Y572 518 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 DDX49Q9Y6V7 483 aaKnown RBP12.01□□□□□ -0.49
HIF3A-219ENST00000600879 PARP14Q460N5 1801 aa12.01□□□□□ -0.49
HIF3A-219ENST00000600879 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
HIF3A-219ENST00000600879 ARVCFO00192 962 aa12□□□□□ -0.49
HIF3A-219ENST00000600879 GOLIM4O00461 696 aa12□□□□□ -0.49
HIF3A-219ENST00000600879 DUSP11O75319 330 aaKnown RBP12□□□□□ -0.49
HIF3A-219ENST00000600879 CDK8P49336 464 aa12□□□□□ -0.49
HIF3A-219ENST00000600879 GNASQ5JWF2 1037 aa12□□□□□ -0.49
HIF3A-219ENST00000600879 TMEM31Q5JXX7 168 aa12□□□□□ -0.49
HIF3A-219ENST00000600879 SNRNP48Q6IEG0 339 aaKnown RBP12□□□□□ -0.49
HIF3A-219ENST00000600879 SPRED2Q7Z698 418 aa12□□□□□ -0.49
HIF3A-219ENST00000600879 SCLYQ96I15 445 aa12□□□□□ -0.49
HIF3A-219ENST00000600879 TRPV6Q9H1D0 765 aa12□□□□□ -0.49
HIF3A-219ENST00000600879 MROH7Q68CQ1 1323 aa12□□□□□ -0.49
HIF3A-219ENST00000600879 GBF1Q92538 1859 aa12□□□□□ -0.49
HIF3A-219ENST00000600879 TCRBV5S4A2TA0A5A2 114 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 ZBBXA8MT70 800 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 TLR3O15455 904 aaKnown RBP11.99□□□□□ -0.49
HIF3A-219ENST00000600879 ARHGEF15O94989 841 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 MBD4O95243 580 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 ACVR2BQ13705 512 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 TTF1Q15361 905 aaPredicted RBP11.99□□□□□ -0.49
HIF3A-219ENST00000600879 CCDC144BQ3MJ40 725 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 CXCL17Q6UXB2 119 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 CPXCR1Q8N123 301 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 STK11IPQ8N1F8 1099 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 PCSK9Q8NBP7 692 aaKnown RBP11.99□□□□□ -0.49
HIF3A-219ENST00000600879 WNT8AQ9H1J5 351 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 HIPK3Q9H422 1215 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 GOPCQ9HD26 462 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms