RNA–Protein interactions for RNA: ENST00000600479.5

PLD3-222, Transcript of phospholipase D family member 3, human

TSL 4

Gene PLD3, Length 477 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-222	ENST00000600479	REPS2	Q8NFH8	660 aa		18.9	■□□□□ 0.62
PLD3-222	ENST00000600479	TCEANC2	Q96MN5	208 aa		18.9	■□□□□ 0.62
PLD3-222	ENST00000600479	SPATC1L	Q9H0A9	340 aa		18.9	■□□□□ 0.62
PLD3-222	ENST00000600479	SLC38A10	Q9HBR0	1119 aa		18.9	■□□□□ 0.62
PLD3-222	ENST00000600479	GPCPD1	Q9NPB8	672 aa		18.9	■□□□□ 0.62
PLD3-222	ENST00000600479	CYP46A1	Q9Y6A2	500 aa		18.9	■□□□□ 0.62
PLD3-222	ENST00000600479	MYH4	Q9Y623	1939 aa		18.9	■□□□□ 0.62
PLD3-222	ENST00000600479	CALM1	P0DP23	149 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	CALM2	P0DP24	149 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	CALM3	P0DP25	149 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	CPA1	P15085	419 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	MAPK4	P31152	587 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	PSMC4	P43686	418 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	OAZ1	P54368	228 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	FGD1	P98174	961 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	GRM4	Q14833	912 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	TMEM132B	Q14DG7	1078 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	SYDE2	Q5VT97	1194 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	TTBK2	Q6IQ55	1244 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	CTU1	Q7Z7A3	348 aa	Known RBP	18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	AGXT2	Q9BYV1	514 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	ZNF214	Q9UL59	606 aa	Predicted RBP	18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	PRR12	Q9ULL5	1215 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	SLC12A7	Q9Y666	1083 aa		18.89	■□□□□ 0.61
PLD3-222	ENST00000600479	PALM3	A6NDB9	673 aa	Predicted RBP	18.88	■□□□□ 0.61
PLD3-222	ENST00000600479	PEX10	O60683	326 aa		18.88	■□□□□ 0.61
PLD3-222	ENST00000600479	GOLGA8H	P0CJ92	632 aa		18.88	■□□□□ 0.61
PLD3-222	ENST00000600479	COPB2	P35606	906 aa		18.88	■□□□□ 0.61
PLD3-222	ENST00000600479	SYNE3	Q6ZMZ3	975 aa		18.88	■□□□□ 0.61
PLD3-222	ENST00000600479		Q6ZUG5	572 aa		18.88	■□□□□ 0.61
PLD3-222	ENST00000600479	SHCBP1	Q8NEM2	672 aa		18.88	■□□□□ 0.61
PLD3-222	ENST00000600479	TRIM47	Q96LD4	638 aa		18.88	■□□□□ 0.61
PLD3-222	ENST00000600479	TEX13B	Q9BXU2	312 aa		18.88	■□□□□ 0.61
PLD3-222	ENST00000600479	ARHGAP39	Q9C0H5	1083 aa		18.88	■□□□□ 0.61
PLD3-222	ENST00000600479	EFCC1	Q9HA90	598 aa		18.88	■□□□□ 0.61
PLD3-222	ENST00000600479	UPF2	Q9HAU5	1272 aa	Known RBP	18.88	■□□□□ 0.61
PLD3-222	ENST00000600479	MAD2L2	Q9UI95	211 aa		18.88	■□□□□ 0.61
PLD3-222	ENST00000600479		A0A0G2JMZ2	1700 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	TNPO2	O14787	897 aa	Known RBP	18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	FMNL1	O95466	1100 aa	Predicted RBP	18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	SLC25A27	O95847	323 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	HOXD10	P28358	340 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	CTGF	P29279	349 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	KIF5B	P33176	963 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	SLC16A2	P36021	539 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	STAT3	P40763	770 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	RCAN1	P53805	252 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	CAP1	Q01518	475 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	OTOP1	Q7RTM1	612 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	RIOX2	Q8IUF8	465 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	CCAR1	Q8IX12	1150 aa	Known RBP	18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	MOV10L1	Q9BXT6	1211 aa	Known RBP	18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	UPF3B	Q9BZI7	483 aa	Known RBP	18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	PORCN	Q9H237	461 aa		18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	RANBP17	Q9H2T7	1088 aa	Known RBP	18.87	■□□□□ 0.61
PLD3-222	ENST00000600479	KLRF2	D3W0D1	207 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	RBM25	P49756	843 aa	Known RBP	18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	PRMT2	P55345	433 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	PLS1	Q14651	629 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	PKN2	Q16513	984 aa	Known RBP	18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	APOA5	Q6Q788	366 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	STAG2	Q8N3U4	1231 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	CTCFL	Q8NI51	663 aa	Predicted RBP	18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	NUP133	Q8WUM0	1156 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	COA7	Q96BR5	231 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	C22orf23	Q9BZE7	217 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	MROH8	Q9H579	483 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	PNMA2	Q9UL42	364 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	TRIM17	Q9Y577	477 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	RLF	Q13129	1914 aa		18.86	■□□□□ 0.61
PLD3-222	ENST00000600479	GNAQ	P50148	359 aa		18.85	■□□□□ 0.61
PLD3-222	ENST00000600479	BRF1	Q92994	677 aa		18.85	■□□□□ 0.61
PLD3-222	ENST00000600479	LZTS2	Q9BRK4	669 aa		18.85	■□□□□ 0.61
PLD3-222	ENST00000600479	MYL10	Q9BUA6	226 aa		18.85	■□□□□ 0.61
PLD3-222	ENST00000600479	BACH2	Q9BYV9	841 aa		18.85	■□□□□ 0.61
PLD3-222	ENST00000600479	UBA5	Q9GZZ9	404 aa		18.85	■□□□□ 0.61
PLD3-222	ENST00000600479	BRPF3	Q9ULD4	1205 aa		18.85	■□□□□ 0.61
PLD3-222	ENST00000600479	ZNF536	O15090	1300 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	KLF18	A0A0U1RQI7	1052 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	ZBTB43	O43298	467 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	ERCC3	P19447	782 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	SMARCA1	P28370	1054 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	EVC	P57679	992 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	SNRNP48	Q6IEG0	339 aa	Known RBP	18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	GPR142	Q7Z601	462 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	PLEKHH3	Q7Z736	793 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	ADGRF4	Q8IZF3	695 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	CPXCR1	Q8N123	301 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	FANCB	Q8NB91	859 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	CWC22	Q9HCG8	908 aa	Known RBP	18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	RAVER2	Q9HCJ3	691 aa	Known RBP	18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	PDRG1	Q9NUG6	133 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	SRRD	Q9UH36	339 aa		18.84	■□□□□ 0.61
PLD3-222	ENST00000600479	STRN	O43815	780 aa		18.83	■□□□□ 0.6
PLD3-222	ENST00000600479	ICAM1	P05362	532 aa		18.83	■□□□□ 0.6
PLD3-222	ENST00000600479	MICU3	Q86XE3	530 aa		18.83	■□□□□ 0.6
PLD3-222	ENST00000600479	NCAPG2	Q86XI2	1143 aa		18.83	■□□□□ 0.6
PLD3-222	ENST00000600479	SOCS4	Q8WXH5	440 aa		18.83	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms