RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 HMX1Q9NP08 348 aaPredicted RBP9.42□□□□□ -0.9
CHMP2A-205ENST00000600006 TOMM22Q9NS69 142 aa9.42□□□□□ -0.9
CHMP2A-205ENST00000600006 CTNNA3Q9UI47 895 aa9.42□□□□□ -0.9
CHMP2A-205ENST00000600006 ALPK3Q96L96 1907 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 TNRC18O15417 2968 aaPredicted RBP9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 SGSM2O43147 1006 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 PLA2G6O60733 806 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 FDX1P10109 184 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 TOP1P11387 765 aaKnown RBP9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 PRKAR2AP13861 404 aaKnown RBP9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 STAT3P40763 770 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 SLC1A4P43007 532 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 OAZ1P54368 228 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 IMMTQ16891 758 aaKnown RBP9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 OLFML2BQ68BL8 750 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 RCSD1Q6JBY9 416 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 RASGRP2Q7LDG7 609 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 FAM160B2Q86V87 743 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 NPLOC4Q8TAT6 608 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 DCAF4Q8WV16 495 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 ESR2Q92731 530 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 KIFC2Q96AC6 838 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 DEFB118Q96PH6 123 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 TMEM47Q9BQJ4 181 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 FLRT1Q9NZU1 646 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 LRRC37A2A6NM11 1700 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 BRCA2P51587 3418 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 LCTP09848 1927 aa9.41□□□□□ -0.9
CHMP2A-205ENST00000600006 TMEM232C9JQI7 657 aa9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 COBLO75128 1261 aa9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 FCER1AP12319 257 aa9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 MCCP23508 829 aa9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 CACNB2Q08289 660 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 KCTD2Q14681 263 aa9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 BMP2KLQ5H9B9 411 aa9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 SNRNP48Q6IEG0 339 aaKnown RBP9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 DPP9Q86TI2 863 aa9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 CHURC1Q8WUH1 139 aa9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 TTC14Q96N46 770 aa9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 MMP19Q99542 508 aa9.4□□□□□ -0.9
CHMP2A-205ENST00000600006 ZNF536O15090 1300 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 B4E1Z4 1266 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 ZBED4O75132 1171 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 KDM4AO75164 1064 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 FARP2O94887 1054 aaPredicted RBP9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 SNHG28P0DPA3 235 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 PDHBP11177 359 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 CCND3P30281 292 aaPredicted RBP9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 PTH1RQ03431 593 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 CCDC96Q2M329 555 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 PRPF38BQ5VTL8 546 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 MFSD14CQ5VZR4 134 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 BTNL9Q6UXG8 535 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 KCTD1Q719H9 257 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 SKAP1Q86WV1 359 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 DGKHQ86XP1 1220 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 CPXCR1Q8N123 301 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 ANKLE1Q8NAG6 615 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 ANKS1AQ92625 1134 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 MAML3Q96JK9 1138 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 KRT23Q9C075 422 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 CNNM2Q9H8M5 875 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 RAVER2Q9HCJ3 691 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 SLC5A4Q9NY91 659 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 PRR12Q9ULL5 1215 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 ISY1Q9ULR0 285 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 RIPK3Q9Y572 518 aa9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 U3KPZ7 1027 aaPredicted RBP9.39□□□□□ -0.91
CHMP2A-205ENST00000600006 TNKSO95271 1327 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 MCM3APO60318 1980 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 DNAJC25-GNG10A0A024R161 153 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 CYP21A2P08686 494 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 CYBAP13498 195 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 CYP2C19P33261 490 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 IKQ13123 557 aaPredicted RBP9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 ZNF792Q3KQV3 632 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 CCDC178Q5BJE1 867 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 IQCA1Q86XH1 822 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 CHST13Q8NET6 341 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 ZKSCAN3Q9BRR0 538 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 RANBP17Q9H2T7 1088 aaKnown RBP9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 FBXO40Q9UH90 709 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 OGDHLQ9ULD0 1010 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 DIS3Q9Y2L1 958 aaKnown RBP9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 CTDP1Q9Y5B0 961 aaPredicted RBP9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 MYH6P13533 1939 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 SMCHD1A6NHR9 2005 aa9.38□□□□□ -0.91
CHMP2A-205ENST00000600006 FRMPD2Q68DX3 1309 aaPredicted RBP9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 MSCO60682 206 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 TFRCP02786 760 aaKnown RBP9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 PGK2P07205 417 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 MNX1P50219 401 aaPredicted RBP9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 ZNF543Q08ER8 600 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 TKFCQ3LXA3 575 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 SYDE2Q5VT97 1194 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 LHX8Q68G74 356 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 TTBK2Q6IQ55 1244 aa9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 ENAHQ8N8S7 591 aaPredicted RBP9.37□□□□□ -0.91
CHMP2A-205ENST00000600006 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms