RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 XRCC5P13010 732 aaKnown RBP33.14■■■□□ 2.9
SSBP4-206ENST00000599699 CCL5P13501 91 aa33.14■■■□□ 2.9
SSBP4-206ENST00000599699 SLC4A3P48751 1232 aa33.14■■■□□ 2.9
SSBP4-206ENST00000599699 RGS19P49795 217 aa33.14■■■□□ 2.9
SSBP4-206ENST00000599699 DGKHQ86XP1 1220 aa33.14■■■□□ 2.9
SSBP4-206ENST00000599699 REPS2Q8NFH8 660 aa33.14■■■□□ 2.9
SSBP4-206ENST00000599699 ZSCAN10Q96SZ4 725 aaPredicted RBP33.14■■■□□ 2.9
SSBP4-206ENST00000599699 APBA2Q99767 749 aa33.14■■■□□ 2.9
SSBP4-206ENST00000599699 UBAC1Q9BSL1 405 aa33.14■■■□□ 2.9
SSBP4-206ENST00000599699 ZNF214Q9UL59 606 aaPredicted RBP33.14■■■□□ 2.9
SSBP4-206ENST00000599699 STRNO43815 780 aa33.13■■■□□ 2.89
SSBP4-206ENST00000599699 GRB14Q14449 540 aa33.13■■■□□ 2.89
SSBP4-206ENST00000599699 RIOX2Q8IUF8 465 aa33.13■■■□□ 2.89
SSBP4-206ENST00000599699 CPXCR1Q8N123 301 aa33.13■■■□□ 2.89
SSBP4-206ENST00000599699 LSG1Q9H089 658 aaKnown RBP33.13■■■□□ 2.89
SSBP4-206ENST00000599699 RNF208Q9H0X6 261 aa33.13■■■□□ 2.89
SSBP4-206ENST00000599699 ZKSCAN1P17029 563 aaPredicted RBP33.12■■■□□ 2.89
SSBP4-206ENST00000599699 SNRNP48Q6IEG0 339 aaKnown RBP33.12■■■□□ 2.89
SSBP4-206ENST00000599699 TRMT44Q8IYL2 757 aaKnown RBP33.12■■■□□ 2.89
SSBP4-206ENST00000599699 TEX13BQ9BXU2 312 aa33.12■■■□□ 2.89
SSBP4-206ENST00000599699 COPB2P35606 906 aa33.11■■■□□ 2.89
SSBP4-206ENST00000599699 RALYLQ86SE5 291 aaKnown RBP33.11■■■□□ 2.89
SSBP4-206ENST00000599699 DPP9Q86TI2 863 aa33.11■■■□□ 2.89
SSBP4-206ENST00000599699 TRIB2Q92519 343 aa33.11■■■□□ 2.89
SSBP4-206ENST00000599699 UNC93B1Q9H1C4 597 aa33.11■■■□□ 2.89
SSBP4-206ENST00000599699 KAT14Q9H8E8 782 aa33.11■■■□□ 2.89
SSBP4-206ENST00000599699 SLC38A10Q9HBR0 1119 aa33.11■■■□□ 2.89
SSBP4-206ENST00000599699 RAVER2Q9HCJ3 691 aaKnown RBP33.11■■■□□ 2.89
SSBP4-206ENST00000599699 PLXNB2O15031 1838 aa33.11■■■□□ 2.89
SSBP4-206ENST00000599699 TNKSO95271 1327 aa33.1■■■□□ 2.89
SSBP4-206ENST00000599699 FRMPD2Q68DX3 1309 aaPredicted RBP33.1■■■□□ 2.89
SSBP4-206ENST00000599699 FCER1AP12319 257 aa33.1■■■□□ 2.89
SSBP4-206ENST00000599699 ADORA2AP29274 412 aa33.1■■■□□ 2.89
SSBP4-206ENST00000599699 MLLT1Q03111 559 aaPredicted RBP33.1■■■□□ 2.89
SSBP4-206ENST00000599699 GPCPD1Q9NPB8 672 aa33.1■■■□□ 2.89
SSBP4-206ENST00000599699 E7EWF7 191 aa33.09■■■□□ 2.89
SSBP4-206ENST00000599699 PLA2G6O60733 806 aa33.09■■■□□ 2.89
SSBP4-206ENST00000599699 FDX1P10109 184 aa33.09■■■□□ 2.89
SSBP4-206ENST00000599699 EN2P19622 333 aaPredicted RBP33.09■■■□□ 2.89
SSBP4-206ENST00000599699 CCL14Q16627 93 aa33.09■■■□□ 2.89
SSBP4-206ENST00000599699 ENAHQ8N8S7 591 aaPredicted RBP33.09■■■□□ 2.89
SSBP4-206ENST00000599699 TAF6LQ9Y6J9 622 aa33.09■■■□□ 2.89
SSBP4-206ENST00000599699 COL11A1P12107 1806 aaPredicted RBP33.09■■■□□ 2.89
SSBP4-206ENST00000599699 PDHBP11177 359 aa33.08■■■□□ 2.89
SSBP4-206ENST00000599699 TRIM32Q13049 653 aa33.08■■■□□ 2.89
SSBP4-206ENST00000599699 CYB5R4Q7L1T6 521 aa33.08■■■□□ 2.89
SSBP4-206ENST00000599699 PNMA1Q8ND90 353 aa33.08■■■□□ 2.89
SSBP4-206ENST00000599699 NCOA7Q8NI08 942 aa33.08■■■□□ 2.89
SSBP4-206ENST00000599699 MMP19Q99542 508 aa33.08■■■□□ 2.89
SSBP4-206ENST00000599699 KIAA0100Q14667 2235 aaKnown RBP33.08■■■□□ 2.89
SSBP4-206ENST00000599699 TTBK2Q6IQ55 1244 aa33.07■■■□□ 2.88
SSBP4-206ENST00000599699 ABRAQ8N0Z2 381 aa33.07■■■□□ 2.88
SSBP4-206ENST00000599699 SLC5A4Q9NY91 659 aa33.07■■■□□ 2.88
SSBP4-206ENST00000599699 PRR12Q9ULL5 1215 aa33.07■■■□□ 2.88
SSBP4-206ENST00000599699 ATP2A1O14983 1001 aa33.06■■■□□ 2.88
SSBP4-206ENST00000599699 SLC16A2P36021 539 aa33.06■■■□□ 2.88
SSBP4-206ENST00000599699 KCTD2Q14681 263 aa33.06■■■□□ 2.88
SSBP4-206ENST00000599699 ANKS1AQ92625 1134 aa33.06■■■□□ 2.88
SSBP4-206ENST00000599699 HOXC6P09630 235 aa33.05■■■□□ 2.88
SSBP4-206ENST00000599699 OAZ1P54368 228 aa33.05■■■□□ 2.88
SSBP4-206ENST00000599699 SNAP25P60880 206 aa33.05■■■□□ 2.88
SSBP4-206ENST00000599699 IFIT1BQ5T764 474 aaKnown RBP33.05■■■□□ 2.88
SSBP4-206ENST00000599699 STOX1Q6ZVD7 989 aa33.05■■■□□ 2.88
SSBP4-206ENST00000599699 NPLOC4Q8TAT6 608 aa33.05■■■□□ 2.88
SSBP4-206ENST00000599699 RIPK3Q9Y572 518 aa33.05■■■□□ 2.88
SSBP4-206ENST00000599699 GJB1P08034 283 aa33.04■■■□□ 2.88
SSBP4-206ENST00000599699 PRKAR2AP13861 404 aaKnown RBP33.04■■■□□ 2.88
SSBP4-206ENST00000599699 ZNF543Q08ER8 600 aa33.04■■■□□ 2.88
SSBP4-206ENST00000599699 SYDE2Q5VT97 1194 aa33.04■■■□□ 2.88
SSBP4-206ENST00000599699 MFSD14CQ5VZR4 134 aa33.04■■■□□ 2.88
SSBP4-206ENST00000599699 CCDC174Q6PII3 467 aa33.04■■■□□ 2.88
SSBP4-206ENST00000599699 HMX1Q9NP08 348 aaPredicted RBP33.04■■■□□ 2.88
SSBP4-206ENST00000599699 ERICH2A1L162 156 aa33.03■■■□□ 2.88
SSBP4-206ENST00000599699 SLC27A2O14975 620 aa33.03■■■□□ 2.88
SSBP4-206ENST00000599699 COBLO75128 1261 aa33.03■■■□□ 2.88
SSBP4-206ENST00000599699 HOMER2Q9NSB8 354 aa33.03■■■□□ 2.88
SSBP4-206ENST00000599699 RPTORQ8N122 1335 aa33.02■■■□□ 2.88
SSBP4-206ENST00000599699 IFIT3O14879 490 aaKnown RBP33.02■■■□□ 2.88
SSBP4-206ENST00000599699 SNHG28P0DPA3 235 aa33.02■■■□□ 2.88
SSBP4-206ENST00000599699 SART3Q15020 963 aaKnown RBP33.02■■■□□ 2.88
SSBP4-206ENST00000599699 CREB3L3Q68CJ9 461 aa33.02■■■□□ 2.88
SSBP4-206ENST00000599699 BTNL9Q6UXG8 535 aa33.02■■■□□ 2.88
SSBP4-206ENST00000599699 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.02■■■□□ 2.882e-12■■■□□ 14.7
SSBP4-206ENST00000599699 FLRT1Q9NZU1 646 aa33.02■■■□□ 2.88
SSBP4-206ENST00000599699 GOLGA8HP0CJ92 632 aa33.01■■■□□ 2.87
SSBP4-206ENST00000599699 CACNB2Q08289 660 aaPredicted RBP33.01■■■□□ 2.87
SSBP4-206ENST00000599699 GPATCH4Q5T3I0 446 aaKnown RBP33.01■■■□□ 2.87
SSBP4-206ENST00000599699 CHST3Q7LGC8 479 aa33.01■■■□□ 2.87
SSBP4-206ENST00000599699 AGBL1Q96MI9 1066 aa33.01■■■□□ 2.87
SSBP4-206ENST00000599699 DEFB118Q96PH6 123 aa33.01■■■□□ 2.87
SSBP4-206ENST00000599699 PGK2P07205 417 aa33■■■□□ 2.87
SSBP4-206ENST00000599699 GJA8P48165 433 aa33■■■□□ 2.87
SSBP4-206ENST00000599699 NECTIN1Q15223 517 aa33■■■□□ 2.87
SSBP4-206ENST00000599699 U2AF1L4Q8WU68 220 aaKnown RBP33■■■□□ 2.87
SSBP4-206ENST00000599699 DDX11Q96FC9 970 aa33■■■□□ 2.87
SSBP4-206ENST00000599699 FBXO40Q9UH90 709 aa33■■■□□ 2.87
SSBP4-206ENST00000599699 RBBP6Q7Z6E9 1792 aaKnown RBP32.99■■■□□ 2.87
SSBP4-206ENST00000599699 SEC23AQ15436 765 aa32.99■■■□□ 2.87
SSBP4-206ENST00000599699 MAP3K21Q5TCX8 1036 aa32.99■■■□□ 2.87
SSBP4-206ENST00000599699 RNF20Q5VTR2 975 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms