RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 PALM3A6NDB9 673 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 ERVK-9P63128 1117 aa19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 ERVK-24P63145 666 aa19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 APOA5Q6Q788 366 aa19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 Q6ZUG5 572 aa19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 ANKRD13CQ8N6S4 541 aa19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 ATG4CQ96DT6 458 aa19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 R3HDMLQ9H3Y0 253 aa19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 SLC38A10Q9HBR0 1119 aa19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 PDRG1Q9NUG6 133 aa19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 FBXO28Q9NVF7 368 aa19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 CTDP1Q9Y5B0 961 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-219ENST00000599575 CCDC196A0A1B0GTZ2 297 aa19.3■□□□□ 0.68
SHKBP1-219ENST00000599575 SLC25A27O95847 323 aa19.3■□□□□ 0.68
SHKBP1-219ENST00000599575 LACTBP83111 547 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-219ENST00000599575 COL9A3Q14050 684 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-219ENST00000599575 SYDE2Q5VT97 1194 aa19.3■□□□□ 0.68
SHKBP1-219ENST00000599575 SHCBP1Q8NEM2 672 aa19.3■□□□□ 0.68
SHKBP1-219ENST00000599575 ZNF296Q8WUU4 475 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-219ENST00000599575 KIFC2Q96AC6 838 aa19.3■□□□□ 0.68
SHKBP1-219ENST00000599575 LRRC2Q9BYS8 371 aa19.3■□□□□ 0.68
SHKBP1-219ENST00000599575 PRR12Q9ULL5 1215 aa19.3■□□□□ 0.68
SHKBP1-219ENST00000599575 MTMR7Q9Y216 660 aa19.3■□□□□ 0.68
SHKBP1-219ENST00000599575 KLRF2D3W0D1 207 aa19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 ZBTB43O43298 467 aa19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 MAPK4P31152 587 aa19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 TRAF1Q13077 416 aa19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 FANCBQ8NB91 859 aa19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 BRF1Q92994 677 aa19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 TBC1D32Q96NH3 1257 aa19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 TEX13BQ9BXU2 312 aa19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 UPF3BQ9BZI7 483 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 SPATC1LQ9H0A9 340 aa19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 SENP2Q9HC62 589 aa19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 GPHNQ9NQX3 736 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 RBM28Q9NW13 759 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 MAD2L2Q9UI95 211 aa19.29■□□□□ 0.68
SHKBP1-219ENST00000599575 CPA1P15085 419 aa19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 LBX1P52954 281 aa19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 CCAR1Q8IX12 1150 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 REPS2Q8NFH8 660 aa19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 NUP133Q8WUM0 1156 aa19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 ZNF274Q96GC6 653 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 TCEANC2Q96MN5 208 aa19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 PAGR1Q9BTK6 254 aa19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 MROH8Q9H579 483 aa19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 TXNRD2Q9NNW7 524 aa19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 GPCPD1Q9NPB8 672 aa19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 ZNF214Q9UL59 606 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-219ENST00000599575 FRMPD2Q68DX3 1309 aaPredicted RBP19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 KLF18A0A0U1RQI7 1052 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 CNMDO75829 334 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 HOXD10P28358 340 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 STAT3P40763 770 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 PRMT2P55345 433 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 FCGRTP55899 365 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 TMEM132BQ14DG7 1078 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 RABEP1Q15276 862 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 TKFCQ3LXA3 575 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 POTEEQ6S8J3 1075 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 RIOX2Q8IUF8 465 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 MAF1Q9H063 256 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 RANBP17Q9H2T7 1088 aaKnown RBP19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 BTBD7Q9P203 1132 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 TSKSQ9UJT2 592 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 NID2Q14112 1375 aa19.27■□□□□ 0.68
SHKBP1-219ENST00000599575 STRNO43815 780 aa19.26■□□□□ 0.67
SHKBP1-219ENST00000599575 GOLGA8HP0CJ92 632 aa19.26■□□□□ 0.67
SHKBP1-219ENST00000599575 NEK4P51957 841 aa19.26■□□□□ 0.67
SHKBP1-219ENST00000599575 TTBK2Q6IQ55 1244 aa19.26■□□□□ 0.67
SHKBP1-219ENST00000599575 CHMP4CQ96CF2 233 aa19.26■□□□□ 0.67
SHKBP1-219ENST00000599575 SPZ1Q9BXG8 430 aa19.26■□□□□ 0.67
SHKBP1-219ENST00000599575 RIOX1Q9H6W3 641 aa19.26■□□□□ 0.67
SHKBP1-219ENST00000599575 FBXO40Q9UH90 709 aa19.26■□□□□ 0.67
SHKBP1-219ENST00000599575 BRPF3Q9ULD4 1205 aa19.26■□□□□ 0.67
SHKBP1-219ENST00000599575 A0A0G2JMZ2 1700 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 ICAM1P05362 532 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 SLC16A2P36021 539 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 PSMC4P43686 418 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 TOB2Q14106 344 aaPredicted RBP19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 Q3C1V9 767 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 RASGRP2Q7LDG7 609 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 MICU3Q86XE3 530 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 ADGRF4Q8IZF3 695 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 ABRAQ8N0Z2 381 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 COA7Q96BR5 231 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 KIF2CQ99661 725 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 MOV10L1Q9BXT6 1211 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 RLFQ13129 1914 aa19.25■□□□□ 0.67
SHKBP1-219ENST00000599575 GOLGA8BA8MQT2 603 aa19.24■□□□□ 0.67
SHKBP1-219ENST00000599575 METAP2P50579 478 aaKnown RBP eCLIP19.24■□□□□ 0.67
SHKBP1-219ENST00000599575 APOBRQ0VD83 1088 aa19.24■□□□□ 0.67
SHKBP1-219ENST00000599575 PKN2Q16513 984 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-219ENST00000599575 RTN1Q16799 776 aa19.24■□□□□ 0.67
SHKBP1-219ENST00000599575 SAMD1Q6SPF0 538 aaPredicted RBP19.24■□□□□ 0.67
SHKBP1-219ENST00000599575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.24■□□□□ 0.67
SHKBP1-219ENST00000599575 STAG2Q8N3U4 1231 aa19.24■□□□□ 0.67
SHKBP1-219ENST00000599575 CHST13Q8NET6 341 aa19.24■□□□□ 0.67
SHKBP1-219ENST00000599575 MTMR8Q96EF0 704 aa19.24■□□□□ 0.67
SHKBP1-219ENST00000599575 EFCC1Q9HA90 598 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms